RNA–Protein interactions for RNA: ENST00000525004.5

UBXN1-205, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-205ENST00000525004 NISCHQ9Y2I1 1504 aa33.43■■■□□ 2.94
UBXN1-205ENST00000525004 CCDC180Q9P1Z9 1646 aa29.55■■■□□ 2.32
UBXN1-205ENST00000525004 ABCC9O60706 1549 aa28.38■■■□□ 2.13
UBXN1-205ENST00000525004 ZCCHC6Q5VYS8 1495 aaKnown RBP27.94■■■□□ 2.06
UBXN1-205ENST00000525004 DCAF1Q9Y4B6 1507 aa27.75■■■□□ 2.03
UBXN1-205ENST00000525004 MYO15BQ96JP2 1530 aa27.72■■■□□ 2.03
UBXN1-205ENST00000525004 NACADO15069 1562 aa27.67■■■□□ 2.02
UBXN1-205ENST00000525004 DCAF8L2P0C7V8 631 aa27.6■■■□□ 2.01
UBXN1-205ENST00000525004 RB1CC1Q8TDY2 1594 aa27.56■■■□□ 2
UBXN1-205ENST00000525004 UNC13AQ9UPW8 1703 aa27■■□□□ 1.91
UBXN1-205ENST00000525004 SCRIBQ14160 1630 aa26.88■■□□□ 1.89
UBXN1-205ENST00000525004 BICRAQ9NZM4 1560 aa26.75■■□□□ 1.87
UBXN1-205ENST00000525004 PABPN1Q86U42 306 aaKnown RBP eCLIP26.58■■□□□ 1.85
UBXN1-205ENST00000525004 SHROOM4Q9ULL8 1493 aa26.52■■□□□ 1.84
UBXN1-205ENST00000525004 EIF4G1Q04637 1599 aaKnown RBP25.97■■□□□ 1.75
UBXN1-205ENST00000525004 CECR2Q9BXF3 1484 aa25.97■■□□□ 1.75
UBXN1-205ENST00000525004 BAZ1AQ9NRL2 1556 aaPredicted RBP25.86■■□□□ 1.73
UBXN1-205ENST00000525004 SMARCA4P51532 1647 aa25.83■■□□□ 1.73
UBXN1-205ENST00000525004 MROH2BQ7Z745 1585 aa25.75■■□□□ 1.71
UBXN1-205ENST00000525004 CC2D2AQ9P2K1 1620 aa25.74■■□□□ 1.71
UBXN1-205ENST00000525004 DNAJC5BQ9UF47 199 aa25.72■■□□□ 1.71
UBXN1-205ENST00000525004 PEG3Q9GZU2 1588 aa25.64■■□□□ 1.69
UBXN1-205ENST00000525004 RSF1Q96T23 1441 aaPredicted RBP25.63■■□□□ 1.69
UBXN1-205ENST00000525004 ATAD2BQ9ULI0 1458 aa25.59■■□□□ 1.69
UBXN1-205ENST00000525004 SMARCA2P51531 1590 aa25.57■■□□□ 1.68
UBXN1-205ENST00000525004 NCAPD3P42695 1498 aa25.55■■□□□ 1.68
UBXN1-205ENST00000525004 WIZO95785 1651 aa25.49■■□□□ 1.67
UBXN1-205ENST00000525004 HMGXB3Q12766 1538 aa25.43■■□□□ 1.66
UBXN1-205ENST00000525004 BAZ1BQ9UIG0 1483 aaKnown RBP25.35■■□□□ 1.65
UBXN1-205ENST00000525004 TOP2AP11388 1531 aaKnown RBP25.25■■□□□ 1.63
UBXN1-205ENST00000525004 SUPT5HO00267 1087 aaKnown RBP25.19■■□□□ 1.62
UBXN1-205ENST00000525004 CCDC88BA6NC98 1476 aa24.96■■□□□ 1.59
UBXN1-205ENST00000525004 CADPSQ9ULU8 1353 aa24.8■■□□□ 1.56
UBXN1-205ENST00000525004 LAMC3Q9Y6N6 1575 aa24.77■■□□□ 1.56
UBXN1-205ENST00000525004 CFTRP13569 1480 aa24.75■■□□□ 1.55
UBXN1-205ENST00000525004 NESP48681 1621 aa24.72■■□□□ 1.55
UBXN1-205ENST00000525004 PRDM2Q13029 1718 aa24.62■■□□□ 1.53
UBXN1-205ENST00000525004 PDS5BQ9NTI5 1447 aa24.56■■□□□ 1.52
UBXN1-205ENST00000525004 KIF21AQ7Z4S6 1674 aa24.46■■□□□ 1.51
UBXN1-205ENST00000525004 FANCD2Q9BXW9 1451 aa24.46■■□□□ 1.51
UBXN1-205ENST00000525004 ERCC6Q03468 1493 aa24.38■■□□□ 1.49
UBXN1-205ENST00000525004 CEP164Q9UPV0 1460 aa24.38■■□□□ 1.49
UBXN1-205ENST00000525004 THOC2Q8NI27 1593 aaKnown RBP24.28■■□□□ 1.48
UBXN1-205ENST00000525004 MRC2Q9UBG0 1479 aa24.26■■□□□ 1.47
UBXN1-205ENST00000525004 URB2Q14146 1524 aaKnown RBP24.21■■□□□ 1.47
UBXN1-205ENST00000525004 ABCC8Q09428 1581 aa24.2■■□□□ 1.47
UBXN1-205ENST00000525004 WDR62O43379 1518 aa24.2■■□□□ 1.47
UBXN1-205ENST00000525004 DNMBPQ6XZF7 1577 aa24.16■■□□□ 1.46
UBXN1-205ENST00000525004 TOPBP1Q92547 1522 aa24.15■■□□□ 1.46
UBXN1-205ENST00000525004 CUX1P39880 1505 aa24.13■■□□□ 1.45
UBXN1-205ENST00000525004 WRNQ14191 1432 aaPredicted RBP eCLIP24.12■■□□□ 1.45
UBXN1-205ENST00000525004 CUX2O14529 1486 aa24.07■■□□□ 1.44
UBXN1-205ENST00000525004 BIVM-ERCC5R4GMW8 1640 aa24.06■■□□□ 1.44
UBXN1-205ENST00000525004 TOP2BQ02880 1626 aa24.06■■□□□ 1.44
UBXN1-205ENST00000525004 SYNJ1O43426 1573 aa24.03■■□□□ 1.44
UBXN1-205ENST00000525004 POLA1P09884 1462 aaPredicted RBP23.96■■□□□ 1.43
UBXN1-205ENST00000525004 FGD5Q6ZNL6 1462 aa23.95■■□□□ 1.42
UBXN1-205ENST00000525004 TARBP1Q13395 1621 aaKnown RBP23.88■■□□□ 1.41
UBXN1-205ENST00000525004 IFT140Q96RY7 1462 aa23.87■■□□□ 1.41
UBXN1-205ENST00000525004 CHIC1Q5VXU3 224 aa23.87■■□□□ 1.41
UBXN1-205ENST00000525004 SOGA1O94964 1423 aa23.86■■□□□ 1.41
UBXN1-205ENST00000525004 RAD54L2Q9Y4B4 1467 aa23.83■■□□□ 1.41
UBXN1-205ENST00000525004 TRIM41Q8WV44 630 aa23.82■■□□□ 1.4
UBXN1-205ENST00000525004 WDR97A6NE52 1622 aa23.79■■□□□ 1.4
UBXN1-205ENST00000525004 ABCA10Q8WWZ4 1543 aa23.79■■□□□ 1.4
UBXN1-205ENST00000525004 ZNF608Q9ULD9 1512 aaPredicted RBP23.71■■□□□ 1.39
UBXN1-205ENST00000525004 TDRD9Q8NDG6 1382 aaKnown RBP23.65■■□□□ 1.38
UBXN1-205ENST00000525004 AQRO60306 1485 aaKnown RBP eCLIP23.64■■□□□ 1.385e-7■■■□□ 18.7
UBXN1-205ENST00000525004 ABCA5Q8WWZ7 1642 aa23.64■■□□□ 1.38
UBXN1-205ENST00000525004 EIF4G3O43432 1585 aaKnown RBP23.64■■□□□ 1.37
UBXN1-205ENST00000525004 GAPVD1Q14C86 1478 aa23.6■■□□□ 1.37
UBXN1-205ENST00000525004 KIF27Q86VH2 1401 aa23.59■■□□□ 1.37
UBXN1-205ENST00000525004 GRIN2BQ13224 1484 aa23.54■■□□□ 1.36
UBXN1-205ENST00000525004 PBRM1Q86U86 1689 aa23.53■■□□□ 1.36
UBXN1-205ENST00000525004 ERICH3Q5RHP9 1530 aa23.51■■□□□ 1.35
UBXN1-205ENST00000525004 RUSC2Q8N2Y8 1516 aa23.51■■□□□ 1.35
UBXN1-205ENST00000525004 IGF1RP08069 1367 aa23.48■■□□□ 1.35
UBXN1-205ENST00000525004 EEA1Q15075 1411 aa23.45■■□□□ 1.34
UBXN1-205ENST00000525004 MAGI1Q96QZ7 1491 aaPredicted RBP23.44■■□□□ 1.34
UBXN1-205ENST00000525004 SNAPC4Q5SXM2 1469 aa23.41■■□□□ 1.34
UBXN1-205ENST00000525004 CUL7Q14999 1698 aa23.36■■□□□ 1.33
UBXN1-205ENST00000525004 ADAMTS12P58397 1594 aa23.35■■□□□ 1.33
UBXN1-205ENST00000525004 FHAD1B1AJZ9 1412 aa23.35■■□□□ 1.33
UBXN1-205ENST00000525004 CSRNP3Q8WYN3 585 aa23.35■■□□□ 1.33
UBXN1-205ENST00000525004 SYNJ2O15056 1496 aa23.34■■□□□ 1.33
UBXN1-205ENST00000525004 CARMIL1Q5VZK9 1371 aa23.32■■□□□ 1.32
UBXN1-205ENST00000525004 PRXQ9BXM0 1461 aa23.29■■□□□ 1.32
UBXN1-205ENST00000525004 CHD1O14646 1710 aa23.28■■□□□ 1.32
UBXN1-205ENST00000525004 CHMP7Q8WUX9 453 aaPredicted RBP23.25■■□□□ 1.31
UBXN1-205ENST00000525004 FAM9AQ8IZU1 332 aaPredicted RBP23.24■■□□□ 1.31
UBXN1-205ENST00000525004 GRIN2AQ12879 1464 aa23.24■■□□□ 1.31
UBXN1-205ENST00000525004 RAPGEF2Q9Y4G8 1499 aa23.23■■□□□ 1.31
UBXN1-205ENST00000525004 FBLN2P98095 1184 aa23.18■■□□□ 1.3
UBXN1-205ENST00000525004 KIF21BO75037 1637 aa23.18■■□□□ 1.3
UBXN1-205ENST00000525004 NUP160Q12769 1436 aa23.16■■□□□ 1.3
UBXN1-205ENST00000525004 OSCARQ8IYS5 282 aa23.14■■□□□ 1.29
UBXN1-205ENST00000525004 CEP170Q5SW79 1584 aa23.1■■□□□ 1.29
UBXN1-205ENST00000525004 CLASP1Q7Z460 1538 aa23.05■■□□□ 1.28
UBXN1-205ENST00000525004 GOLGA3Q08378 1498 aa23.03■■□□□ 1.28
UBXN1-205ENST00000525004 KIAA0586Q9BVV6 1533 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms