RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 TPM1P09493 284 aa10.07□□□□□ -0.8
PCM1-212ENST00000519253 RRS1Q15050 365 aaKnown RBP10.07□□□□□ -0.8
PCM1-212ENST00000519253 C16orf45Q96MC5 204 aaPredicted RBP10.07□□□□□ -0.8
PCM1-212ENST00000519253 TRAPPC8Q9Y2L5 1435 aa10.07□□□□□ -0.8
PCM1-212ENST00000519253 C8orf58Q8NAV2 365 aa10.07□□□□□ -0.8
PCM1-212ENST00000519253 KDM4AO75164 1064 aa10.07□□□□□ -0.8
PCM1-212ENST00000519253 SMC2O95347 1197 aa10.07□□□□□ -0.8
PCM1-212ENST00000519253 FILIP1Q7Z7B0 1213 aa10.07□□□□□ -0.8
PCM1-212ENST00000519253 MEIS3Q99687 375 aa10.07□□□□□ -0.8
PCM1-212ENST00000519253 ACBD3Q9H3P7 528 aa10.07□□□□□ -0.8
PCM1-212ENST00000519253 TMEM63CQ9P1W3 806 aa10.07□□□□□ -0.8
PCM1-212ENST00000519253 CALCOCO1Q9P1Z2 691 aa10.07□□□□□ -0.8
PCM1-212ENST00000519253 CLIP2Q9UDT6 1046 aa10.07□□□□□ -0.8
PCM1-212ENST00000519253 ZFYVE9O95405 1425 aa10.06□□□□□ -0.8
PCM1-212ENST00000519253 TSPYL6Q8N831 410 aa10.06□□□□□ -0.8
PCM1-212ENST00000519253 TSPYL1Q9H0U9 437 aa10.06□□□□□ -0.8
PCM1-212ENST00000519253 DNAJC5BQ9UF47 199 aa10.06□□□□□ -0.8
PCM1-212ENST00000519253 CTAGE5O15320 804 aa10.06□□□□□ -0.8
PCM1-212ENST00000519253 NUTM1Q86Y26 1132 aa10.06□□□□□ -0.8
PCM1-212ENST00000519253 KIF24Q5T7B8 1368 aa10.06□□□□□ -0.8
PCM1-212ENST00000519253 GIMAP6Q6P9H5 292 aa10.06□□□□□ -0.8
PCM1-212ENST00000519253 MCM10Q7L590 875 aa10.06□□□□□ -0.8
PCM1-212ENST00000519253 FERMT3Q86UX7 667 aa10.06□□□□□ -0.8
PCM1-212ENST00000519253 EID1Q9Y6B2 187 aa10.06□□□□□ -0.8
PCM1-212ENST00000519253 ADGRL1O94910 1474 aa10.06□□□□□ -0.8
PCM1-212ENST00000519253 PLA2R1Q13018 1463 aa10.06□□□□□ -0.8
PCM1-212ENST00000519253 CAMK4Q16566 473 aa10.06□□□□□ -0.8
PCM1-212ENST00000519253 C1orf141Q5JVX7 400 aa10.06□□□□□ -0.8
PCM1-212ENST00000519253 ERBB4Q15303 1308 aa10.06□□□□□ -0.8
PCM1-212ENST00000519253 ATP10AO60312 1499 aa10.05□□□□□ -0.8
PCM1-212ENST00000519253 SPDYE4A6NLX3 237 aa10.05□□□□□ -0.8
PCM1-212ENST00000519253 BRD1O95696 1058 aa10.05□□□□□ -0.8
PCM1-212ENST00000519253 MAP4K4O95819 1239 aaPredicted RBP10.05□□□□□ -0.8
PCM1-212ENST00000519253 BRPF1P55201 1214 aaPredicted RBP10.05□□□□□ -0.8
PCM1-212ENST00000519253 F13A1P00488 732 aa10.05□□□□□ -0.8
PCM1-212ENST00000519253 HSP90B2PQ58FF3 399 aa10.05□□□□□ -0.8
PCM1-212ENST00000519253 PHF23Q9BUL5 403 aaPredicted RBP10.05□□□□□ -0.8
PCM1-212ENST00000519253 CNPY2Q9Y2B0 182 aa10.05□□□□□ -0.8
PCM1-212ENST00000519253 POLR1AO95602 1720 aaPredicted RBP10.05□□□□□ -0.8
PCM1-212ENST00000519253 GJB2P29033 226 aa10.05□□□□□ -0.8
PCM1-212ENST00000519253 ZNF165P49910 485 aa10.05□□□□□ -0.8
PCM1-212ENST00000519253 PRPF40BQ6NWY9 871 aaKnown RBP10.05□□□□□ -0.8
PCM1-212ENST00000519253 NPHP1O15259 732 aa10.05□□□□□ -0.8
PCM1-212ENST00000519253 CLEC17AQ6ZS10 378 aa10.05□□□□□ -0.8
PCM1-212ENST00000519253 UBXN4Q92575 508 aa10.05□□□□□ -0.8
PCM1-212ENST00000519253 CCDC171Q6TFL3 1326 aa10.05□□□□□ -0.8
PCM1-212ENST00000519253 F6X3S4 739 aa10.05□□□□□ -0.8
PCM1-212ENST00000519253 KRT222Q8N1A0 295 aa10.05□□□□□ -0.8
PCM1-212ENST00000519253 AK7Q96M32 723 aa10.05□□□□□ -0.8
PCM1-212ENST00000519253 ANO10Q9NW15 660 aa10.05□□□□□ -0.8
PCM1-212ENST00000519253 EPB41L2O43491 1005 aaKnown RBP10.04□□□□□ -0.8
PCM1-212ENST00000519253 OLFM4Q6UX06 510 aa10.04□□□□□ -0.8
PCM1-212ENST00000519253 GSDMDP57764 484 aa10.04□□□□□ -0.8
PCM1-212ENST00000519253 FBXW7Q969H0 707 aa10.04□□□□□ -0.8
PCM1-212ENST00000519253 BCL11BQ9C0K0 894 aaPredicted RBP10.04□□□□□ -0.8
PCM1-212ENST00000519253 POLKQ9UBT6 870 aa10.04□□□□□ -0.8
PCM1-212ENST00000519253 NME9Q86XW9 330 aa10.04□□□□□ -0.8
PCM1-212ENST00000519253 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.04□□□□□ -0.8
PCM1-212ENST00000519253 ME1P48163 572 aa10.04□□□□□ -0.8
PCM1-212ENST00000519253 STK38Q15208 465 aa10.04□□□□□ -0.8
PCM1-212ENST00000519253 OGFRQ9NZT2 677 aa10.04□□□□□ -0.8
PCM1-212ENST00000519253 ERVK-7P63135 1459 aa10.04□□□□□ -0.8
PCM1-212ENST00000519253 FLIIQ13045 1269 aa10.04□□□□□ -0.8
PCM1-212ENST00000519253 CCDC186Q7Z3E2 898 aa10.04□□□□□ -0.8
PCM1-212ENST00000519253 CKAP2LQ8IYA6 745 aa10.04□□□□□ -0.8
PCM1-212ENST00000519253 ABCC4O15439 1325 aa10.03□□□□□ -0.8
PCM1-212ENST00000519253 A0A1W2PP64 1363 aa10.03□□□□□ -0.8
PCM1-212ENST00000519253 TRIM29Q14134 588 aa10.03□□□□□ -0.8
PCM1-212ENST00000519253 TMCO3Q6UWJ1 677 aa10.03□□□□□ -0.8
PCM1-212ENST00000519253 SMTNL1A8MU46 457 aa10.03□□□□□ -0.8
PCM1-212ENST00000519253 DHX16O60231 1041 aaKnown RBP10.03□□□□□ -0.8
PCM1-212ENST00000519253 SFPQP23246 707 aaKnown RBP eCLIP10.03□□□□□ -0.8
PCM1-212ENST00000519253 NUDT16Q96DE0 195 aaKnown RBP10.03□□□□□ -0.8
PCM1-212ENST00000519253 LRRFIP2Q9Y608 721 aaKnown RBP10.03□□□□□ -0.8
PCM1-212ENST00000519253 ZNF518AQ6AHZ1 1483 aa10.03□□□□□ -0.8
PCM1-212ENST00000519253 FAM83GA6ND36 823 aa10.03□□□□□ -0.8
PCM1-212ENST00000519253 IDI1Q13907 227 aa10.03□□□□□ -0.8
PCM1-212ENST00000519253 CBFA2T2O43439 604 aa10.03□□□□□ -0.8
PCM1-212ENST00000519253 CHMLP26374 656 aa10.03□□□□□ -0.8
PCM1-212ENST00000519253 CEP135Q66GS9 1140 aa10.03□□□□□ -0.8
PCM1-212ENST00000519253 GSPT1P15170 499 aaKnown RBP10.02□□□□□ -0.8
PCM1-212ENST00000519253 ATP8B2P98198 1209 aa10.02□□□□□ -0.8
PCM1-212ENST00000519253 CEBPZQ03701 1054 aaKnown RBP10.02□□□□□ -0.8
PCM1-212ENST00000519253 STK3Q13188 491 aa10.02□□□□□ -0.8
PCM1-212ENST00000519253 BMS1Q14692 1282 aaKnown RBP10.02□□□□□ -0.8
PCM1-212ENST00000519253 FMNL2Q96PY5 1086 aa10.02□□□□□ -0.8
PCM1-212ENST00000519253 CD2BP2O95400 341 aaKnown RBP10.02□□□□□ -0.81
PCM1-212ENST00000519253 FANCAO15360 1455 aa10.02□□□□□ -0.81
PCM1-212ENST00000519253 KDM5AP29375 1690 aaKnown RBP10.02□□□□□ -0.81
PCM1-212ENST00000519253 GPT2Q8TD30 523 aa10.02□□□□□ -0.81
PCM1-212ENST00000519253 PHACTR3Q96KR7 559 aa10.02□□□□□ -0.81
PCM1-212ENST00000519253 TTC37Q6PGP7 1564 aa10.02□□□□□ -0.81
PCM1-212ENST00000519253 TSR1Q2NL82 804 aaKnown RBP10.02□□□□□ -0.81
PCM1-212ENST00000519253 AACSQ86V21 672 aa10.02□□□□□ -0.81
PCM1-212ENST00000519253 KLHL34Q8N239 644 aa10.02□□□□□ -0.81
PCM1-212ENST00000519253 JMYQ8N9B5 988 aa10.02□□□□□ -0.81
PCM1-212ENST00000519253 ERCC4Q92889 916 aaPredicted RBP10.02□□□□□ -0.81
PCM1-212ENST00000519253 TSHZ3Q63HK5 1081 aa10.02□□□□□ -0.81
PCM1-212ENST00000519253 CCDC70Q6NSX1 233 aa10.02□□□□□ -0.81
PCM1-212ENST00000519253 TRPM1Q7Z4N2 1603 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms