RNA–Protein interactions for RNA: ENST00000517940.1

AP3B1-203, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 2

Gene AP3B1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-203ENST00000517940 BCL11BQ9C0K0 894 aaPredicted RBP15.61■□□□□ 0.09
AP3B1-203ENST00000517940 NFATC2IPQ8NCF5 419 aa15.6■□□□□ 0.09
AP3B1-203ENST00000517940 CICQ96RK0 1608 aaPredicted RBP15.6■□□□□ 0.09
AP3B1-203ENST00000517940 CCDC27Q2M243 656 aa15.59■□□□□ 0.09
AP3B1-203ENST00000517940 WWC1Q8IX03 1113 aa15.59■□□□□ 0.09
AP3B1-203ENST00000517940 ASAP1Q9ULH1 1129 aa15.59■□□□□ 0.09
AP3B1-203ENST00000517940 TJP1Q07157 1748 aa15.59■□□□□ 0.09
AP3B1-203ENST00000517940 C5P01031 1676 aa15.58■□□□□ 0.08
AP3B1-203ENST00000517940 NUP188Q5SRE5 1749 aa15.58■□□□□ 0.08
AP3B1-203ENST00000517940 KCNQ3O43525 872 aa15.58■□□□□ 0.08
AP3B1-203ENST00000517940 NCBP3Q53F19 620 aaKnown RBP15.58■□□□□ 0.08
AP3B1-203ENST00000517940 SLC4A9Q96Q91 983 aa15.58■□□□□ 0.08
AP3B1-203ENST00000517940 ATG3Q9NT62 314 aa15.58■□□□□ 0.08
AP3B1-203ENST00000517940 TAF1LQ8IZX4 1826 aa15.58■□□□□ 0.08
AP3B1-203ENST00000517940 ZNF831Q5JPB2 1677 aa15.57■□□□□ 0.08
AP3B1-203ENST00000517940 NEFMP07197 916 aa15.57■□□□□ 0.08
AP3B1-203ENST00000517940 SLC39A6Q13433 755 aa15.57■□□□□ 0.08
AP3B1-203ENST00000517940 PROM2Q8N271 834 aa15.57■□□□□ 0.08
AP3B1-203ENST00000517940 SYTL4Q96C24 671 aaPredicted RBP15.57■□□□□ 0.08
AP3B1-203ENST00000517940 SPINK5Q9NQ38 1064 aaPredicted RBP15.57■□□□□ 0.08
AP3B1-203ENST00000517940 TMOD3Q9NYL9 352 aa15.57■□□□□ 0.08
AP3B1-203ENST00000517940 SALL2Q9Y467 1007 aaPredicted RBP15.57■□□□□ 0.08
AP3B1-203ENST00000517940 ZNF853P0CG23 659 aa15.56■□□□□ 0.08
AP3B1-203ENST00000517940 CABP4P57796 275 aa15.56■□□□□ 0.08
AP3B1-203ENST00000517940 DEFB132Q7Z7B7 95 aa15.56■□□□□ 0.08
AP3B1-203ENST00000517940 MIS18AQ9NYP9 233 aa15.56■□□□□ 0.08
AP3B1-203ENST00000517940 COL5A3P25940 1745 aaPredicted RBP15.56■□□□□ 0.08
AP3B1-203ENST00000517940 PALLDQ8WX93 1383 aa15.55■□□□□ 0.08
AP3B1-203ENST00000517940 RTF1Q92541 710 aaKnown RBP15.55■□□□□ 0.08
AP3B1-203ENST00000517940 LMOD3Q0VAK6 560 aa15.54■□□□□ 0.08
AP3B1-203ENST00000517940 CAMKK2Q96RR4 588 aa15.54■□□□□ 0.08
AP3B1-203ENST00000517940 HEG1Q9ULI3 1381 aa15.53■□□□□ 0.08
AP3B1-203ENST00000517940 CHL1O00533 1208 aa15.53■□□□□ 0.08
AP3B1-203ENST00000517940 APBA3O96018 575 aa15.53■□□□□ 0.08
AP3B1-203ENST00000517940 TEFQ10587 303 aa15.53■□□□□ 0.08
AP3B1-203ENST00000517940 LRRC4BQ9NT99 713 aa15.53■□□□□ 0.08
AP3B1-203ENST00000517940 MYH14Q7Z406 1995 aaKnown RBP15.53■□□□□ 0.08
AP3B1-203ENST00000517940 TUBGCP6Q96RT7 1819 aa15.52■□□□□ 0.08
AP3B1-203ENST00000517940 PLSCR1O15162 318 aa15.52■□□□□ 0.08
AP3B1-203ENST00000517940 KCNQ4P56696 695 aa15.52■□□□□ 0.08
AP3B1-203ENST00000517940 EN1Q05925 392 aaPredicted RBP15.52■□□□□ 0.08
AP3B1-203ENST00000517940 TAF7Q15545 349 aaPredicted RBP15.52■□□□□ 0.08
AP3B1-203ENST00000517940 EZH2Q15910 746 aaKnown RBP15.51■□□□□ 0.07
AP3B1-203ENST00000517940 ZNF790Q6PG37 636 aa15.51■□□□□ 0.07
AP3B1-203ENST00000517940 ZNF496Q96IT1 587 aaPredicted RBP15.51■□□□□ 0.07
AP3B1-203ENST00000517940 LAMB4A4D0S4 1761 aa15.51■□□□□ 0.07
AP3B1-203ENST00000517940 BTBD11A6QL63 1104 aa15.5■□□□□ 0.07
AP3B1-203ENST00000517940 HNRNPUQ00839 825 aaKnown RBP eCLIP15.5■□□□□ 0.07
AP3B1-203ENST00000517940 ITPK1Q13572 414 aa15.5■□□□□ 0.07
AP3B1-203ENST00000517940 KRT24Q2M2I5 525 aa15.5■□□□□ 0.07
AP3B1-203ENST00000517940 MBIPQ9NS73 344 aa15.5■□□□□ 0.07
AP3B1-203ENST00000517940 IL16Q14005 1332 aa15.49■□□□□ 0.07
AP3B1-203ENST00000517940 PRAMEF22A3QJZ6 481 aa15.49■□□□□ 0.07
AP3B1-203ENST00000517940 CCDC125Q86Z20 511 aa15.49■□□□□ 0.07
AP3B1-203ENST00000517940 WDR63Q8IWG1 891 aa15.49■□□□□ 0.07
AP3B1-203ENST00000517940 NGEFQ8N5V2 710 aa15.49■□□□□ 0.07
AP3B1-203ENST00000517940 CDCA7LQ96GN5 454 aa15.49■□□□□ 0.07
AP3B1-203ENST00000517940 CFAP44Q96MT7 982 aa15.49■□□□□ 0.07
AP3B1-203ENST00000517940 IFT57Q9NWB7 429 aa15.49■□□□□ 0.07
AP3B1-203ENST00000517940 C4BP0C0L5 1744 aa15.48■□□□□ 0.07
AP3B1-203ENST00000517940 LOC102724428A0A0B4J2F2 783 aa15.48■□□□□ 0.07
AP3B1-203ENST00000517940 PTCD1O75127 700 aaKnown RBP15.48■□□□□ 0.07
AP3B1-203ENST00000517940 SIK1P57059 783 aa15.48■□□□□ 0.07
AP3B1-203ENST00000517940 EIF4A1P60842 406 aaKnown RBP15.48■□□□□ 0.07
AP3B1-203ENST00000517940 TXNRD1Q16881 649 aa15.48■□□□□ 0.07
AP3B1-203ENST00000517940 TSR2Q969E8 191 aaKnown RBP15.48■□□□□ 0.07
AP3B1-203ENST00000517940 FANCIQ9NVI1 1328 aa15.47■□□□□ 0.07
AP3B1-203ENST00000517940 SOCS7O14512 581 aa15.47■□□□□ 0.07
AP3B1-203ENST00000517940 AMIGO3Q86WK7 504 aa15.47■□□□□ 0.07
AP3B1-203ENST00000517940 TRMT2AQ8IZ69 625 aaKnown RBP15.47■□□□□ 0.07
AP3B1-203ENST00000517940 ANO8Q9HCE9 1232 aaPredicted RBP15.47■□□□□ 0.07
AP3B1-203ENST00000517940 BABAM1Q9NWV8 329 aa15.47■□□□□ 0.07
AP3B1-203ENST00000517940 TSPYL4Q9UJ04 414 aa15.47■□□□□ 0.07
AP3B1-203ENST00000517940 ZBED9Q6R2W3 1325 aa15.46■□□□□ 0.07
AP3B1-203ENST00000517940 UBR3Q6ZT12 1888 aa15.46■□□□□ 0.07
AP3B1-203ENST00000517940 LINC00116Q8NCU8 138 aa15.46■□□□□ 0.07
AP3B1-203ENST00000517940 SMARCC1Q92922 1105 aaPredicted RBP15.46■□□□□ 0.07
AP3B1-203ENST00000517940 BAG6P46379 1132 aa15.45■□□□□ 0.06
AP3B1-203ENST00000517940 DNAJC10Q8IXB1 793 aa15.45■□□□□ 0.06
AP3B1-203ENST00000517940 LAS1LQ9Y4W2 734 aaKnown RBP15.45■□□□□ 0.06
AP3B1-203ENST00000517940 GNAI1P63096 354 aa15.44■□□□□ 0.06
AP3B1-203ENST00000517940 SLFN5Q08AF3 891 aa15.44■□□□□ 0.06
AP3B1-203ENST00000517940 ZNF827Q17R98 1081 aa15.44■□□□□ 0.06
AP3B1-203ENST00000517940 RBM42Q9BTD8 480 aaKnown RBP15.44■□□□□ 0.06
AP3B1-203ENST00000517940 CCNL1Q9UK58 526 aaPredicted RBP15.44■□□□□ 0.06
AP3B1-203ENST00000517940 QSER1Q2KHR3 1735 aa15.43■□□□□ 0.06
AP3B1-203ENST00000517940 GIGYF1O75420 1035 aaPredicted RBP15.43■□□□□ 0.06
AP3B1-203ENST00000517940 SLC27A3Q5K4L6 730 aa15.43■□□□□ 0.06
AP3B1-203ENST00000517940 TSPYL6Q8N831 410 aa15.43■□□□□ 0.06
AP3B1-203ENST00000517940 C8orf58Q8NAV2 365 aa15.43■□□□□ 0.06
AP3B1-203ENST00000517940 ATP6V1AP38606 617 aa15.42■□□□□ 0.06
AP3B1-203ENST00000517940 CALD1Q05682 793 aaKnown RBP15.42■□□□□ 0.06
AP3B1-203ENST00000517940 GOLGA2Q08379 1002 aa15.42■□□□□ 0.06
AP3B1-203ENST00000517940 SF3B2Q13435 895 aaKnown RBP15.42■□□□□ 0.06
AP3B1-203ENST00000517940 DUSP27Q5VZP5 1158 aa15.42■□□□□ 0.06
AP3B1-203ENST00000517940 VSIG10Q8N0Z9 540 aa15.42■□□□□ 0.06
AP3B1-203ENST00000517940 FMNL2Q96PY5 1086 aa15.42■□□□□ 0.06
AP3B1-203ENST00000517940 USP16Q9Y5T5 823 aa15.42■□□□□ 0.06
AP3B1-203ENST00000517940 C4AP0C0L4 1744 aa15.42■□□□□ 0.06
AP3B1-203ENST00000517940 CYP19A1P11511 503 aaPredicted RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms