RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 IRX3P78415 501 aaPredicted RBP6.35□□□□□ -1.39
CLDND1-208ENST00000503004 CERS3Q8IU89 383 aa6.35□□□□□ -1.39
CLDND1-208ENST00000503004 C16orf71Q8IYS4 520 aaPredicted RBP6.35□□□□□ -1.39
CLDND1-208ENST00000503004 BCCIPQ9P287 314 aaKnown RBP eCLIP6.35□□□□□ -1.39
CLDND1-208ENST00000503004 PEAK1Q9H792 1746 aa6.35□□□□□ -1.39
CLDND1-208ENST00000503004 SPDYE4A6NLX3 237 aa6.35□□□□□ -1.39
CLDND1-208ENST00000503004 F6X3S4 739 aa6.35□□□□□ -1.39
CLDND1-208ENST00000503004 AMPHP49418 695 aa6.35□□□□□ -1.39
CLDND1-208ENST00000503004 NLRP6P59044 892 aa6.35□□□□□ -1.39
CLDND1-208ENST00000503004 TBC1D9Q6ZT07 1266 aa6.35□□□□□ -1.39
CLDND1-208ENST00000503004 OTUD7AQ8TE49 926 aaPredicted RBP6.35□□□□□ -1.39
CLDND1-208ENST00000503004 EYA1Q99502 592 aa6.35□□□□□ -1.39
CLDND1-208ENST00000503004 MEIS3Q99687 375 aa6.35□□□□□ -1.39
CLDND1-208ENST00000503004 CD2BP2O95400 341 aaKnown RBP6.35□□□□□ -1.39
CLDND1-208ENST00000503004 GSPT1P15170 499 aaKnown RBP6.35□□□□□ -1.39
CLDND1-208ENST00000503004 KCNA6P17658 529 aa6.35□□□□□ -1.39
CLDND1-208ENST00000503004 SLC4A10Q6U841 1118 aa6.35□□□□□ -1.39
CLDND1-208ENST00000503004 G2E3Q7L622 706 aa6.35□□□□□ -1.39
CLDND1-208ENST00000503004 LTV1Q96GA3 475 aaPredicted RBP6.35□□□□□ -1.39
CLDND1-208ENST00000503004 RBM42Q9BTD8 480 aaKnown RBP6.35□□□□□ -1.39
CLDND1-208ENST00000503004 TSPYL4Q9UJ04 414 aa6.35□□□□□ -1.39
CLDND1-208ENST00000503004 MSH6P52701 1360 aa6.34□□□□□ -1.39
CLDND1-208ENST00000503004 RGS12O14924 1447 aa6.34□□□□□ -1.39
CLDND1-208ENST00000503004 SMARCA5O60264 1052 aaPredicted RBP6.34□□□□□ -1.39
CLDND1-208ENST00000503004 RBM25P49756 843 aaKnown RBP6.34□□□□□ -1.39
CLDND1-208ENST00000503004 TERF1P54274 439 aa6.34□□□□□ -1.39
CLDND1-208ENST00000503004 INTS3Q68E01 1043 aaKnown RBP6.34□□□□□ -1.39
CLDND1-208ENST00000503004 RTF1Q92541 710 aaKnown RBP6.34□□□□□ -1.39
CLDND1-208ENST00000503004 USP31Q70CQ4 1352 aa6.34□□□□□ -1.39
CLDND1-208ENST00000503004 SSH2Q76I76 1423 aa6.34□□□□□ -1.39
CLDND1-208ENST00000503004 NRKQ7Z2Y5 1582 aa6.34□□□□□ -1.39
CLDND1-208ENST00000503004 RAD21O60216 631 aa6.34□□□□□ -1.4
CLDND1-208ENST00000503004 HSCBQ8IWL3 235 aa6.34□□□□□ -1.4
CLDND1-208ENST00000503004 KIF2CQ99661 725 aa6.34□□□□□ -1.4
CLDND1-208ENST00000503004 CEP85Q6P2H3 762 aa6.33□□□□□ -1.4
CLDND1-208ENST00000503004 PLEKHM2Q8IWE5 1019 aa6.33□□□□□ -1.4
CLDND1-208ENST00000503004 GTPBP4Q9BZE4 634 aaKnown RBP6.33□□□□□ -1.4
CLDND1-208ENST00000503004 DCTPP1Q9H773 170 aa6.33□□□□□ -1.4
CLDND1-208ENST00000503004 TBX22Q9Y458 520 aa6.33□□□□□ -1.4
CLDND1-208ENST00000503004 FLT4P35916 1363 aa6.33□□□□□ -1.4
CLDND1-208ENST00000503004 CRB1P82279 1406 aa6.33□□□□□ -1.4
CLDND1-208ENST00000503004 RIMS1Q86UR5 1692 aaKnown RBP6.33□□□□□ -1.4
CLDND1-208ENST00000503004 ATP10DQ9P241 1426 aa6.33□□□□□ -1.4
CLDND1-208ENST00000503004 LETM1O95202 739 aaPredicted RBP6.33□□□□□ -1.4
CLDND1-208ENST00000503004 MRE11P49959 708 aa6.33□□□□□ -1.4
CLDND1-208ENST00000503004 DNTTIP2Q5QJE6 756 aaKnown RBP6.33□□□□□ -1.4
CLDND1-208ENST00000503004 THEMISQ8N1K5 641 aaPredicted RBP6.33□□□□□ -1.4
CLDND1-208ENST00000503004 USHBP1Q8N6Y0 703 aa6.33□□□□□ -1.4
CLDND1-208ENST00000503004 CCDC94Q9BW85 323 aaPredicted RBP6.33□□□□□ -1.4
CLDND1-208ENST00000503004 RGPD8O14715 1765 aaPredicted RBP6.33□□□□□ -1.4
CLDND1-208ENST00000503004 TOPAZ1Q8N9V7 1692 aa6.32□□□□□ -1.4
CLDND1-208ENST00000503004 CEP170BQ9Y4F5 1589 aaPredicted RBP6.32□□□□□ -1.4
CLDND1-208ENST00000503004 SBNO1A3KN83 1393 aa6.32□□□□□ -1.4
CLDND1-208ENST00000503004 RTL1A6NKG5 1358 aa6.32□□□□□ -1.4
CLDND1-208ENST00000503004 TTC21AQ8NDW8 1320 aa6.32□□□□□ -1.4
CLDND1-208ENST00000503004 ANKRD44Q8N8A2 993 aa6.32□□□□□ -1.4
CLDND1-208ENST00000503004 ABTB2Q8N961 1025 aa6.32□□□□□ -1.4
CLDND1-208ENST00000503004 SPOCK2Q92563 424 aa6.32□□□□□ -1.4
CLDND1-208ENST00000503004 GRPEL1Q9HAV7 217 aa6.32□□□□□ -1.4
CLDND1-208ENST00000503004 R3HCC1Q9Y3T6 440 aaKnown RBP6.32□□□□□ -1.4
CLDND1-208ENST00000503004 KIAA0232Q92628 1395 aa6.32□□□□□ -1.4
CLDND1-208ENST00000503004 IGSF1Q8N6C5 1336 aa6.32□□□□□ -1.4
CLDND1-208ENST00000503004 TRAK2O60296 914 aa6.32□□□□□ -1.4
CLDND1-208ENST00000503004 MCM4P33991 863 aa6.32□□□□□ -1.4
CLDND1-208ENST00000503004 POTEHQ6S545 545 aa6.32□□□□□ -1.4
CLDND1-208ENST00000503004 CHMP5Q9NZZ3 219 aa6.32□□□□□ -1.4
CLDND1-208ENST00000503004 KDRP35968 1356 aa6.32□□□□□ -1.4
CLDND1-208ENST00000503004 UQCRHLA0A096LP55 91 aa6.31□□□□□ -1.4
CLDND1-208ENST00000503004 UQCRHP07919 91 aa6.31□□□□□ -1.4
CLDND1-208ENST00000503004 HOXC9P31274 260 aa6.31□□□□□ -1.4
CLDND1-208ENST00000503004 MMP14P50281 582 aa6.31□□□□□ -1.4
CLDND1-208ENST00000503004 IRX5P78411 483 aaPredicted RBP6.31□□□□□ -1.4
CLDND1-208ENST00000503004 MTERF4Q7Z6M4 381 aaKnown RBP6.31□□□□□ -1.4
CLDND1-208ENST00000503004 ARHGEF10O15013 1369 aa6.31□□□□□ -1.4
CLDND1-208ENST00000503004 PTPRCP08575 1304 aa6.31□□□□□ -1.4
CLDND1-208ENST00000503004 DIP2AQ14689 1571 aa6.31□□□□□ -1.4
CLDND1-208ENST00000503004 CDC45O75419 566 aa6.31□□□□□ -1.4
CLDND1-208ENST00000503004 HSP90AB1P08238 724 aaKnown RBP6.31□□□□□ -1.4
CLDND1-208ENST00000503004 TSHZ3Q63HK5 1081 aa6.31□□□□□ -1.4
CLDND1-208ENST00000503004 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.31□□□□□ -1.4
CLDND1-208ENST00000503004 RPAP2Q8IXW5 612 aaPredicted RBP6.31□□□□□ -1.4
CLDND1-208ENST00000503004 CGNQ9P2M7 1197 aaKnown RBP6.31□□□□□ -1.4
CLDND1-208ENST00000503004 RGPD1P0DJD0 1748 aa6.31□□□□□ -1.4
CLDND1-208ENST00000503004 NALCNQ8IZF0 1738 aa6.31□□□□□ -1.4
CLDND1-208ENST00000503004 FKBP5Q13451 457 aaPredicted RBP6.31□□□□□ -1.4
CLDND1-208ENST00000503004 TTC22Q5TAA0 569 aa6.31□□□□□ -1.4
CLDND1-208ENST00000503004 IL17REQ8NFR9 667 aa6.31□□□□□ -1.4
CLDND1-208ENST00000503004 CHMP4CQ96CF2 233 aa6.31□□□□□ -1.4
CLDND1-208ENST00000503004 EXOC6BQ9Y2D4 811 aa6.31□□□□□ -1.4
CLDND1-208ENST00000503004 SLIT1O75093 1534 aa6.3□□□□□ -1.4
CLDND1-208ENST00000503004 ARHGAP23Q9P227 1491 aa6.3□□□□□ -1.4
CLDND1-208ENST00000503004 SDSP20132 328 aa6.3□□□□□ -1.4
CLDND1-208ENST00000503004 PSEN1P49768 467 aa6.3□□□□□ -1.4
CLDND1-208ENST00000503004 GAS2L2Q8NHY3 880 aa6.3□□□□□ -1.4
CLDND1-208ENST00000503004 KIF24Q5T7B8 1368 aa6.3□□□□□ -1.4
CLDND1-208ENST00000503004 PIK3C2AO00443 1686 aa6.3□□□□□ -1.4
CLDND1-208ENST00000503004 GNAT3A8MTJ3 354 aa6.3□□□□□ -1.4
CLDND1-208ENST00000503004 FLIIQ13045 1269 aa6.3□□□□□ -1.4
CLDND1-208ENST00000503004 SNX21Q969T3 373 aa6.3□□□□□ -1.4
CLDND1-208ENST00000503004 ZBTB9Q96C00 473 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms