RNA–Protein interactions for RNA: ENST00000472033.1

ABCA4-205, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 3

Gene ABCA4, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-205ENST00000472033 CC2D2BQ6DHV5 1058 aa10.28□□□□□ -0.76
ABCA4-205ENST00000472033 RNF135Q8IUD6 432 aa10.28□□□□□ -0.76
ABCA4-205ENST00000472033 CCDC85AQ96PX6 553 aaPredicted RBP10.28□□□□□ -0.76
ABCA4-205ENST00000472033 SAMD9Q5K651 1589 aa10.27□□□□□ -0.76
ABCA4-205ENST00000472033 SCTRP47872 440 aa10.27□□□□□ -0.77
ABCA4-205ENST00000472033 PROSER2Q86WR7 435 aaPredicted RBP10.27□□□□□ -0.77
ABCA4-205ENST00000472033 ESF1Q9H501 851 aaKnown RBP10.27□□□□□ -0.77
ABCA4-205ENST00000472033 EPRSP07814 1512 aaKnown RBP10.27□□□□□ -0.77
ABCA4-205ENST00000472033 WDR7Q9Y4E6 1490 aa10.26□□□□□ -0.77
ABCA4-205ENST00000472033 ARID3CA6NKF2 412 aa10.26□□□□□ -0.77
ABCA4-205ENST00000472033 POM121CA8CG34 1229 aa10.26□□□□□ -0.77
ABCA4-205ENST00000472033 SPINT1O43278 529 aa10.26□□□□□ -0.77
ABCA4-205ENST00000472033 PHTF2Q8N3S3 785 aa10.26□□□□□ -0.77
ABCA4-205ENST00000472033 ZNF395Q9H8N7 513 aaPredicted RBP10.26□□□□□ -0.77
ABCA4-205ENST00000472033 DOLKQ9UPQ8 538 aa10.26□□□□□ -0.77
ABCA4-205ENST00000472033 SOBPA7XYQ1 873 aa10.25□□□□□ -0.77
ABCA4-205ENST00000472033 MAN1A2O60476 641 aa10.25□□□□□ -0.77
ABCA4-205ENST00000472033 ZNF775Q96BV0 537 aaPredicted RBP10.25□□□□□ -0.77
ABCA4-205ENST00000472033 CDCA7Q9BWT1 371 aaPredicted RBP10.25□□□□□ -0.77
ABCA4-205ENST00000472033 ALG2Q9H553 416 aa10.25□□□□□ -0.77
ABCA4-205ENST00000472033 SOS2Q07890 1332 aaPredicted RBP10.25□□□□□ -0.77
ABCA4-205ENST00000472033 TTLL8A6PVC2 850 aa10.24□□□□□ -0.77
ABCA4-205ENST00000472033 ATP5J2-PTCD1G3V325 749 aa10.24□□□□□ -0.77
ABCA4-205ENST00000472033 PTGIRP43119 386 aa10.24□□□□□ -0.77
ABCA4-205ENST00000472033 KDF1Q8NAX2 398 aaPredicted RBP10.24□□□□□ -0.77
ABCA4-205ENST00000472033 INSM2Q96T92 566 aaPredicted RBP10.24□□□□□ -0.77
ABCA4-205ENST00000472033 KDM6BO15054 1643 aa10.24□□□□□ -0.77
ABCA4-205ENST00000472033 ATP10BO94823 1461 aa10.23□□□□□ -0.77
ABCA4-205ENST00000472033 TEX14Q8IWB6 1497 aa10.23□□□□□ -0.77
ABCA4-205ENST00000472033 EFCAB5A4FU69 1503 aa10.23□□□□□ -0.77
ABCA4-205ENST00000472033 MYCP01106 439 aaPredicted RBP10.23□□□□□ -0.77
ABCA4-205ENST00000472033 TSGA10IPQ3SY00 556 aa10.23□□□□□ -0.77
ABCA4-205ENST00000472033 CYP2U1Q7Z449 544 aa10.23□□□□□ -0.77
ABCA4-205ENST00000472033 POLMQ9NP87 494 aaPredicted RBP10.23□□□□□ -0.77
ABCA4-205ENST00000472033 FHOD3Q2V2M9 1422 aa10.23□□□□□ -0.77
ABCA4-205ENST00000472033 RAPGEF6Q8TEU7 1601 aa10.22□□□□□ -0.77
ABCA4-205ENST00000472033 PLEKHD1A6NEE1 506 aa10.22□□□□□ -0.77
ABCA4-205ENST00000472033 FNBP4Q8N3X1 1017 aaPredicted RBP10.22□□□□□ -0.77
ABCA4-205ENST00000472033 CD109Q6YHK3 1445 aa10.22□□□□□ -0.77
ABCA4-205ENST00000472033 MAP3K4Q9Y6R4 1608 aa10.22□□□□□ -0.77
ABCA4-205ENST00000472033 A6NJR5 290 aa10.21□□□□□ -0.77
ABCA4-205ENST00000472033 CTSOP43234 321 aaPredicted RBP10.21□□□□□ -0.77
ABCA4-205ENST00000472033 OXLD1Q5BKU9 147 aa10.21□□□□□ -0.77
ABCA4-205ENST00000472033 PLPP7Q8NBV4 271 aa10.21□□□□□ -0.77
ABCA4-205ENST00000472033 OSBPL3Q9H4L5 887 aa10.21□□□□□ -0.77
ABCA4-205ENST00000472033 DNMT3LQ9UJW3 386 aa10.21□□□□□ -0.77
ABCA4-205ENST00000472033 CHIC2Q9UKJ5 165 aa10.21□□□□□ -0.77
ABCA4-205ENST00000472033 FIGNL2A6NMB9 653 aa10.2□□□□□ -0.78
ABCA4-205ENST00000472033 PIK3CDO00329 1044 aa10.2□□□□□ -0.78
ABCA4-205ENST00000472033 TRAK2O60296 914 aa10.2□□□□□ -0.78
ABCA4-205ENST00000472033 ADAMTS19Q8TE59 1207 aa10.2□□□□□ -0.78
ABCA4-205ENST00000472033 MAP7D1Q3KQU3 841 aa10.19□□□□□ -0.78
ABCA4-205ENST00000472033 HDGFL1Q5TGJ6 251 aa10.19□□□□□ -0.78
ABCA4-205ENST00000472033 PPRC1Q5VV67 1664 aaKnown RBP10.18□□□□□ -0.78
ABCA4-205ENST00000472033 FMN1Q68DA7 1419 aa10.18□□□□□ -0.78
ABCA4-205ENST00000472033 A0A1W2PRU2 124 aa10.18□□□□□ -0.78
ABCA4-205ENST00000472033 MEN1O00255 615 aa10.18□□□□□ -0.78
ABCA4-205ENST00000472033 USP4Q13107 963 aa10.18□□□□□ -0.78
ABCA4-205ENST00000472033 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.18□□□□□ -0.78
ABCA4-205ENST00000472033 CFAP43Q8NDM7 1665 aa10.18□□□□□ -0.78
ABCA4-205ENST00000472033 MAGI3Q5TCQ9 1506 aa10.17□□□□□ -0.78
ABCA4-205ENST00000472033 NUP153P49790 1475 aaKnown RBP10.17□□□□□ -0.78
ABCA4-205ENST00000472033 SKIP12755 728 aa10.17□□□□□ -0.78
ABCA4-205ENST00000472033 FOXD4L5Q5VV16 416 aaPredicted RBP10.17□□□□□ -0.78
ABCA4-205ENST00000472033 RNF217Q8TC41 542 aa10.17□□□□□ -0.78
ABCA4-205ENST00000472033 ARHGEF10LQ9HCE6 1279 aa10.17□□□□□ -0.78
ABCA4-205ENST00000472033 GTF3C3Q9Y5Q9 886 aa10.17□□□□□ -0.78
ABCA4-205ENST00000472033 TERTO14746 1132 aaKnown RBP10.16□□□□□ -0.78
ABCA4-205ENST00000472033 NFATC2IPQ8NCF5 419 aa10.16□□□□□ -0.78
ABCA4-205ENST00000472033 GLMNQ92990 594 aa10.16□□□□□ -0.78
ABCA4-205ENST00000472033 SIRT1Q96EB6 747 aa10.16□□□□□ -0.78
ABCA4-205ENST00000472033 NXF1Q9UBU9 619 aaKnown RBP10.16□□□□□ -0.78
ABCA4-205ENST00000472033 CDK11AQ9UQ88 783 aaPredicted RBP10.16□□□□□ -0.78
ABCA4-205ENST00000472033 GNRH1P01148 92 aa10.15□□□□□ -0.78
ABCA4-205ENST00000472033 NLRP3Q96P20 1036 aa10.15□□□□□ -0.78
ABCA4-205ENST00000472033 RAB6BQ9NRW1 208 aa10.15□□□□□ -0.78
ABCA4-205ENST00000472033 ARHGAP35Q9NRY4 1499 aa10.15□□□□□ -0.78
ABCA4-205ENST00000472033 PHLDB1Q86UU1 1377 aa10.14□□□□□ -0.79
ABCA4-205ENST00000472033 COL17A1Q9UMD9 1497 aaPredicted RBP10.14□□□□□ -0.79
ABCA4-205ENST00000472033 VEGFBP49765 207 aa10.13□□□□□ -0.79
ABCA4-205ENST00000472033 RNF144AP50876 292 aaPredicted RBP10.13□□□□□ -0.79
ABCA4-205ENST00000472033 CLN3Q13286 438 aa10.13□□□□□ -0.79
ABCA4-205ENST00000472033 UCN2Q96RP3 112 aa10.13□□□□□ -0.79
ABCA4-205ENST00000472033 ABCA9Q8IUA7 1624 aa10.12□□□□□ -0.79
ABCA4-205ENST00000472033 USP17L5A8MUK1 530 aa10.12□□□□□ -0.79
ABCA4-205ENST00000472033 NFX1Q12986 1120 aaKnown RBP10.12□□□□□ -0.79
ABCA4-205ENST00000472033 EML3Q32P44 896 aa10.12□□□□□ -0.79
ABCA4-205ENST00000472033 TREML4Q6UXN2 200 aa10.12□□□□□ -0.79
ABCA4-205ENST00000472033 WFS1O76024 890 aa10.11□□□□□ -0.79
ABCA4-205ENST00000472033 GPC1P35052 558 aa10.11□□□□□ -0.79
ABCA4-205ENST00000472033 PTSQ03393 145 aa10.11□□□□□ -0.79
ABCA4-205ENST00000472033 LYSMD3Q7Z3D4 306 aa10.11□□□□□ -0.79
ABCA4-205ENST00000472033 STAU1O95793 577 aaKnown RBP10.1□□□□□ -0.79
ABCA4-205ENST00000472033 IL2RAP01589 272 aa10.1□□□□□ -0.79
ABCA4-205ENST00000472033 NCOA4Q13772 614 aa10.1□□□□□ -0.79
ABCA4-205ENST00000472033 ESCO1Q5FWF5 840 aa10.1□□□□□ -0.79
ABCA4-205ENST00000472033 SLC27A3Q5K4L6 730 aa10.1□□□□□ -0.79
ABCA4-205ENST00000472033 TBC1D9Q6ZT07 1266 aa10.1□□□□□ -0.79
ABCA4-205ENST00000472033 PRICKLE2Q7Z3G6 844 aa10.1□□□□□ -0.79
ABCA4-205ENST00000472033 NPAS3Q8IXF0 933 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms