RNA–Protein interactions for RNA: ENST00000468965.2

SCAP-210, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-210ENST00000468965 CABP4P57796 275 aa17.19■□□□□ 0.34
SCAP-210ENST00000468965 WWC1Q8IX03 1113 aa17.19■□□□□ 0.34
SCAP-210ENST00000468965 NFATC2IPQ8NCF5 419 aa17.19■□□□□ 0.34
SCAP-210ENST00000468965 BCL11BQ9C0K0 894 aaPredicted RBP17.19■□□□□ 0.34
SCAP-210ENST00000468965 TMOD3Q9NYL9 352 aa17.19■□□□□ 0.34
SCAP-210ENST00000468965 LY75O60449 1722 aa17.18■□□□□ 0.34
SCAP-210ENST00000468965 TEFQ10587 303 aa17.18■□□□□ 0.34
SCAP-210ENST00000468965 NGEFQ8N5V2 710 aa17.18■□□□□ 0.34
SCAP-210ENST00000468965 ZNF521Q96K83 1311 aa17.18■□□□□ 0.34
SCAP-210ENST00000468965 RGPD3A6NKT7 1758 aaPredicted RBP17.17■□□□□ 0.34
SCAP-210ENST00000468965 RGPD4Q7Z3J3 1758 aa17.17■□□□□ 0.34
SCAP-210ENST00000468965 HNRNPUQ00839 825 aaKnown RBP eCLIP17.16■□□□□ 0.34
SCAP-210ENST00000468965 TAF7Q15545 349 aaPredicted RBP17.15■□□□□ 0.34
SCAP-210ENST00000468965 ATG3Q9NT62 314 aa17.15■□□□□ 0.34
SCAP-210ENST00000468965 ASAP1Q9ULH1 1129 aa17.15■□□□□ 0.34
SCAP-210ENST00000468965 SLC39A6Q13433 755 aa17.14■□□□□ 0.33
SCAP-210ENST00000468965 KCPQ6ZWJ8 1503 aa17.14■□□□□ 0.33
SCAP-210ENST00000468965 TAF1LQ8IZX4 1826 aa17.13■□□□□ 0.33
SCAP-210ENST00000468965 KCNQ3O43525 872 aa17.13■□□□□ 0.33
SCAP-210ENST00000468965 ZNF853P0CG23 659 aa17.13■□□□□ 0.33
SCAP-210ENST00000468965 UPF1Q92900 1129 aaKnown RBP eCLIP17.13■□□□□ 0.33
SCAP-210ENST00000468965 MIS18AQ9NYP9 233 aa17.13■□□□□ 0.33
SCAP-210ENST00000468965 BTBD11A6QL63 1104 aa17.12■□□□□ 0.33
SCAP-210ENST00000468965 APBA3O96018 575 aa17.12■□□□□ 0.33
SCAP-210ENST00000468965 WDR63Q8IWG1 891 aa17.12■□□□□ 0.33
SCAP-210ENST00000468965 PALLDQ8WX93 1383 aa17.12■□□□□ 0.33
SCAP-210ENST00000468965 C5P01031 1676 aa17.11■□□□□ 0.33
SCAP-210ENST00000468965 ZNF831Q5JPB2 1677 aa17.11■□□□□ 0.33
SCAP-210ENST00000468965 RREB1Q92766 1687 aa17.11■□□□□ 0.33
SCAP-210ENST00000468965 TJP1Q07157 1748 aa17.11■□□□□ 0.33
SCAP-210ENST00000468965 CHL1O00533 1208 aa17.11■□□□□ 0.33
SCAP-210ENST00000468965 CALD1Q05682 793 aaKnown RBP17.11■□□□□ 0.33
SCAP-210ENST00000468965 SPINK5Q9NQ38 1064 aaPredicted RBP17.11■□□□□ 0.33
SCAP-210ENST00000468965 IL16Q14005 1332 aa17.11■□□□□ 0.33
SCAP-210ENST00000468965 CICQ96RK0 1608 aaPredicted RBP17.1■□□□□ 0.33
SCAP-210ENST00000468965 ZNF790Q6PG37 636 aa17.1■□□□□ 0.33
SCAP-210ENST00000468965 CFAP44Q96MT7 982 aa17.1■□□□□ 0.33
SCAP-210ENST00000468965 YTHDC1Q96MU7 727 aaKnown RBP17.1■□□□□ 0.33
SCAP-210ENST00000468965 IFT57Q9NWB7 429 aa17.1■□□□□ 0.33
SCAP-210ENST00000468965 LAS1LQ9Y4W2 734 aaKnown RBP17.1■□□□□ 0.33
SCAP-210ENST00000468965 PLSCR1O15162 318 aa17.09■□□□□ 0.33
SCAP-210ENST00000468965 GNAI1P63096 354 aa17.09■□□□□ 0.33
SCAP-210ENST00000468965 CCDC125Q86Z20 511 aa17.09■□□□□ 0.33
SCAP-210ENST00000468965 SMARCC1Q92922 1105 aaPredicted RBP17.09■□□□□ 0.33
SCAP-210ENST00000468965 MBIPQ9NS73 344 aa17.09■□□□□ 0.33
SCAP-210ENST00000468965 BABAM1Q9NWV8 329 aa17.09■□□□□ 0.33
SCAP-210ENST00000468965 TSPYL4Q9UJ04 414 aa17.09■□□□□ 0.33
SCAP-210ENST00000468965 ZBED9Q6R2W3 1325 aa17.09■□□□□ 0.33
SCAP-210ENST00000468965 COL5A3P25940 1745 aaPredicted RBP17.09■□□□□ 0.33
SCAP-210ENST00000468965 NUP188Q5SRE5 1749 aa17.08■□□□□ 0.32
SCAP-210ENST00000468965 SF3B2Q13435 895 aaKnown RBP17.08■□□□□ 0.32
SCAP-210ENST00000468965 DEFB132Q7Z7B7 95 aa17.08■□□□□ 0.32
SCAP-210ENST00000468965 ZNF496Q96IT1 587 aaPredicted RBP17.08■□□□□ 0.32
SCAP-210ENST00000468965 SLC4A9Q96Q91 983 aa17.08■□□□□ 0.32
SCAP-210ENST00000468965 MYH14Q7Z406 1995 aaKnown RBP17.08■□□□□ 0.32
SCAP-210ENST00000468965 LAMB4A4D0S4 1761 aa17.07■□□□□ 0.32
SCAP-210ENST00000468965 PTCD1O75127 700 aaKnown RBP17.07■□□□□ 0.32
SCAP-210ENST00000468965 EN1Q05925 392 aaPredicted RBP17.07■□□□□ 0.32
SCAP-210ENST00000468965 GOLGA2Q08379 1002 aa17.07■□□□□ 0.32
SCAP-210ENST00000468965 CDCA7LQ96GN5 454 aa17.07■□□□□ 0.32
SCAP-210ENST00000468965 CAMKK2Q96RR4 588 aa17.07■□□□□ 0.32
SCAP-210ENST00000468965 LOC102724428A0A0B4J2F2 783 aa17.06■□□□□ 0.32
SCAP-210ENST00000468965 BAG6P46379 1132 aa17.06■□□□□ 0.32
SCAP-210ENST00000468965 SIK1P57059 783 aa17.06■□□□□ 0.32
SCAP-210ENST00000468965 EIF4A1P60842 406 aaKnown RBP17.06■□□□□ 0.32
SCAP-210ENST00000468965 TTC5Q8N0Z6 440 aa17.06■□□□□ 0.32
SCAP-210ENST00000468965 PROM2Q8N271 834 aa17.06■□□□□ 0.32
SCAP-210ENST00000468965 TSR2Q969E8 191 aaKnown RBP17.06■□□□□ 0.32
SCAP-210ENST00000468965 RBM42Q9BTD8 480 aaKnown RBP17.06■□□□□ 0.32
SCAP-210ENST00000468965 HEG1Q9ULI3 1381 aa17.05■□□□□ 0.32
SCAP-210ENST00000468965 FANCIQ9NVI1 1328 aa17.05■□□□□ 0.32
SCAP-210ENST00000468965 KCNQ4P56696 695 aa17.05■□□□□ 0.32
SCAP-210ENST00000468965 EZH2Q15910 746 aaKnown RBP17.05■□□□□ 0.32
SCAP-210ENST00000468965 SLFN5Q08AF3 891 aa17.04■□□□□ 0.32
SCAP-210ENST00000468965 TXNRD1Q16881 649 aa17.04■□□□□ 0.32
SCAP-210ENST00000468965 KRT24Q2M2I5 525 aa17.04■□□□□ 0.32
SCAP-210ENST00000468965 FMNL2Q96PY5 1086 aa17.04■□□□□ 0.32
SCAP-210ENST00000468965 LRRC4BQ9NT99 713 aa17.04■□□□□ 0.32
SCAP-210ENST00000468965 E9PSI1 815 aa17.03■□□□□ 0.32
SCAP-210ENST00000468965 ITPK1Q13572 414 aa17.03■□□□□ 0.32
SCAP-210ENST00000468965 TRMT2AQ8IZ69 625 aaKnown RBP17.03■□□□□ 0.32
SCAP-210ENST00000468965 CCNL1Q9UK58 526 aaPredicted RBP17.03■□□□□ 0.32
SCAP-210ENST00000468965 TUBGCP6Q96RT7 1819 aa17.03■□□□□ 0.32
SCAP-210ENST00000468965 PRAMEF22A3QJZ6 481 aa17.02■□□□□ 0.32
SCAP-210ENST00000468965 MYH16Q9H6N6 1097 aa17.02■□□□□ 0.32
SCAP-210ENST00000468965 C4BP0C0L5 1744 aa17.01■□□□□ 0.31
SCAP-210ENST00000468965 ATP6V1AP38606 617 aa17.01■□□□□ 0.31
SCAP-210ENST00000468965 SLC27A3Q5K4L6 730 aa17.01■□□□□ 0.31
SCAP-210ENST00000468965 DNAJC10Q8IXB1 793 aa17.01■□□□□ 0.31
SCAP-210ENST00000468965 VSIG10Q8N0Z9 540 aa17.01■□□□□ 0.31
SCAP-210ENST00000468965 GIGYF1O75420 1035 aaPredicted RBP17■□□□□ 0.31
SCAP-210ENST00000468965 DUSP27Q5VZP5 1158 aa17■□□□□ 0.31
SCAP-210ENST00000468965 UBR3Q6ZT12 1888 aa17■□□□□ 0.31
SCAP-210ENST00000468965 C8orf58Q8NAV2 365 aa17■□□□□ 0.31
SCAP-210ENST00000468965 SNRPA1P09661 255 aaKnown RBP16.99■□□□□ 0.31
SCAP-210ENST00000468965 TSPYL6Q8N831 410 aa16.99■□□□□ 0.31
SCAP-210ENST00000468965 LINC00116Q8NCU8 138 aa16.99■□□□□ 0.31
SCAP-210ENST00000468965 CACNA1FO60840 1977 aa16.98■□□□□ 0.31
SCAP-210ENST00000468965 EXOSC9Q06265 439 aaKnown RBP16.98■□□□□ 0.31
SCAP-210ENST00000468965 USP16Q9Y5T5 823 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms