RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 EDC4Q6P2E9 1401 aaKnown RBP9.82□□□□□ -0.84
RPUSD3-212ENST00000466141 ANKRD26Q9UPS8 1709 aa9.82□□□□□ -0.84
RPUSD3-212ENST00000466141 DNAJC5GQ8N7S2 189 aa9.82□□□□□ -0.84
RPUSD3-212ENST00000466141 RGPD2P0DJD1 1756 aa9.82□□□□□ -0.84
RPUSD3-212ENST00000466141 TOGARAM1Q9Y4F4 1720 aa9.82□□□□□ -0.84
RPUSD3-212ENST00000466141 FBLN1P23142 703 aa9.81□□□□□ -0.84
RPUSD3-212ENST00000466141 APLP1P51693 650 aa9.81□□□□□ -0.84
RPUSD3-212ENST00000466141 PRELPP51888 382 aa9.81□□□□□ -0.84
RPUSD3-212ENST00000466141 HTRA3P83110 453 aa9.81□□□□□ -0.84
RPUSD3-212ENST00000466141 COL13A1Q5TAT6 717 aaPredicted RBP9.81□□□□□ -0.84
RPUSD3-212ENST00000466141 ZCRB1Q8TBF4 217 aaKnown RBP9.81□□□□□ -0.84
RPUSD3-212ENST00000466141 TMC1Q8TDI8 760 aa9.81□□□□□ -0.84
RPUSD3-212ENST00000466141 IP6K1Q92551 441 aa9.81□□□□□ -0.84
RPUSD3-212ENST00000466141 PHF14O94880 888 aa9.8□□□□□ -0.84
RPUSD3-212ENST00000466141 TMF1P82094 1093 aa9.8□□□□□ -0.84
RPUSD3-212ENST00000466141 USHBP1Q8N6Y0 703 aa9.8□□□□□ -0.84
RPUSD3-212ENST00000466141 SLC12A5Q9H2X9 1139 aa9.8□□□□□ -0.84
RPUSD3-212ENST00000466141 TAF1LQ8IZX4 1826 aa9.79□□□□□ -0.84
RPUSD3-212ENST00000466141 PALLDQ8WX93 1383 aa9.79□□□□□ -0.84
RPUSD3-212ENST00000466141 A0A0U1RQG5 324 aaPredicted RBP9.79□□□□□ -0.84
RPUSD3-212ENST00000466141 HSPA5P11021 654 aaKnown RBP9.79□□□□□ -0.84
RPUSD3-212ENST00000466141 CCDC136Q96JN2 1154 aa9.79□□□□□ -0.84
RPUSD3-212ENST00000466141 NMRK2Q9NPI5 230 aa9.79□□□□□ -0.84
RPUSD3-212ENST00000466141 MAP3K19Q56UN5 1328 aa9.79□□□□□ -0.84
RPUSD3-212ENST00000466141 C4BP0C0L5 1744 aa9.79□□□□□ -0.84
RPUSD3-212ENST00000466141 CICQ96RK0 1608 aaPredicted RBP9.78□□□□□ -0.84
RPUSD3-212ENST00000466141 HOXC9P31274 260 aa9.78□□□□□ -0.84
RPUSD3-212ENST00000466141 EIF4G2P78344 907 aaKnown RBP eCLIP9.78□□□□□ -0.84
RPUSD3-212ENST00000466141 NECTIN2Q92692 538 aa9.78□□□□□ -0.84
RPUSD3-212ENST00000466141 PCDH10Q9P2E7 1040 aa9.78□□□□□ -0.84
RPUSD3-212ENST00000466141 WDR90Q96KV7 1748 aa9.78□□□□□ -0.84
RPUSD3-212ENST00000466141 TOMM70O94826 608 aa9.77□□□□□ -0.85
RPUSD3-212ENST00000466141 VASPP50552 380 aaPredicted RBP9.77□□□□□ -0.85
RPUSD3-212ENST00000466141 HDGFL2Q7Z4V5 671 aaPredicted RBP9.77□□□□□ -0.85
RPUSD3-212ENST00000466141 AK7Q96M32 723 aa9.77□□□□□ -0.85
RPUSD3-212ENST00000466141 UBR3Q6ZT12 1888 aa9.76□□□□□ -0.85
RPUSD3-212ENST00000466141 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.76□□□□□ -0.85
RPUSD3-212ENST00000466141 AMPHP49418 695 aa9.76□□□□□ -0.85
RPUSD3-212ENST00000466141 CDCA8Q53HL2 280 aa9.76□□□□□ -0.85
RPUSD3-212ENST00000466141 NBPF6Q5VWK0 638 aa9.76□□□□□ -0.85
RPUSD3-212ENST00000466141 MPRIPQ6WCQ1 1025 aa9.76□□□□□ -0.85
RPUSD3-212ENST00000466141 IFNLR1Q8IU57 520 aaPredicted RBP9.76□□□□□ -0.85
RPUSD3-212ENST00000466141 FLAD1Q8NFF5 587 aa9.76□□□□□ -0.85
RPUSD3-212ENST00000466141 NBPF4Q96M43 638 aa9.76□□□□□ -0.85
RPUSD3-212ENST00000466141 PXDNLA1KZ92 1463 aa9.76□□□□□ -0.85
RPUSD3-212ENST00000466141 KIAA1551Q9HCM1 1747 aa9.76□□□□□ -0.85
RPUSD3-212ENST00000466141 TNS4Q8IZW8 715 aa9.75□□□□□ -0.85
RPUSD3-212ENST00000466141 TERF2IPQ9NYB0 399 aa9.75□□□□□ -0.85
RPUSD3-212ENST00000466141 N4BP2Q86UW6 1770 aaPredicted RBP9.75□□□□□ -0.85
RPUSD3-212ENST00000466141 NSD3Q9BZ95 1437 aa9.74□□□□□ -0.85
RPUSD3-212ENST00000466141 DEKP35659 375 aaKnown RBP9.74□□□□□ -0.85
RPUSD3-212ENST00000466141 RRS1Q15050 365 aaKnown RBP9.74□□□□□ -0.85
RPUSD3-212ENST00000466141 TICAM2Q86XR7 235 aa9.74□□□□□ -0.85
RPUSD3-212ENST00000466141 LINC00116Q8NCU8 138 aa9.74□□□□□ -0.85
RPUSD3-212ENST00000466141 KLRG1Q96E93 195 aa9.74□□□□□ -0.85
RPUSD3-212ENST00000466141 BCS1LQ9Y276 419 aa9.74□□□□□ -0.85
RPUSD3-212ENST00000466141 A0A0G2JLW4 131 aa9.73□□□□□ -0.85
RPUSD3-212ENST00000466141 CYP27B1O15528 508 aa9.73□□□□□ -0.85
RPUSD3-212ENST00000466141 MMP10P09238 476 aa9.73□□□□□ -0.85
RPUSD3-212ENST00000466141 JMYQ8N9B5 988 aa9.73□□□□□ -0.85
RPUSD3-212ENST00000466141 RAPGEF4Q8WZA2 1011 aa9.73□□□□□ -0.85
RPUSD3-212ENST00000466141 ITGB4P16144 1822 aa9.72□□□□□ -0.85
RPUSD3-212ENST00000466141 TATP17735 454 aaPredicted RBP9.72□□□□□ -0.85
RPUSD3-212ENST00000466141 SSFA2P28290 1259 aa9.72□□□□□ -0.85
RPUSD3-212ENST00000466141 ARHGAP27Q6ZUM4 889 aa9.72□□□□□ -0.85
RPUSD3-212ENST00000466141 RBM46Q8TBY0 533 aaKnown RBP9.72□□□□□ -0.85
RPUSD3-212ENST00000466141 COG3Q96JB2 828 aa9.72□□□□□ -0.85
RPUSD3-212ENST00000466141 PCDH11XQ9BZA7 1347 aa9.72□□□□□ -0.85
RPUSD3-212ENST00000466141 PCDH11YQ9BZA8 1340 aa9.72□□□□□ -0.85
RPUSD3-212ENST00000466141 MAP2P11137 1827 aaKnown RBP9.72□□□□□ -0.85
RPUSD3-212ENST00000466141 GNPATO15228 680 aa9.71□□□□□ -0.86
RPUSD3-212ENST00000466141 ITPK1Q13572 414 aa9.71□□□□□ -0.86
RPUSD3-212ENST00000466141 PIGBQ92521 554 aa9.71□□□□□ -0.86
RPUSD3-212ENST00000466141 CGNL1Q0VF96 1302 aa9.71□□□□□ -0.86
RPUSD3-212ENST00000466141 KIF7Q2M1P5 1343 aa9.71□□□□□ -0.86
RPUSD3-212ENST00000466141 KCPQ6ZWJ8 1503 aa9.71□□□□□ -0.86
RPUSD3-212ENST00000466141 KIF13BQ9NQT8 1826 aa9.7□□□□□ -0.86
RPUSD3-212ENST00000466141 PCNTO95613 3336 aa9.7□□□□□ -0.86
RPUSD3-212ENST00000466141 LOC102724428A0A0B4J2F2 783 aa9.7□□□□□ -0.86
RPUSD3-212ENST00000466141 DPEP1P16444 411 aa9.7□□□□□ -0.86
RPUSD3-212ENST00000466141 SIK1P57059 783 aa9.7□□□□□ -0.86
RPUSD3-212ENST00000466141 C9orf131Q5VYM1 1079 aa9.7□□□□□ -0.86
RPUSD3-212ENST00000466141 C16orf71Q8IYS4 520 aaPredicted RBP9.7□□□□□ -0.86
RPUSD3-212ENST00000466141 SMARCC1Q92922 1105 aaPredicted RBP9.7□□□□□ -0.86
RPUSD3-212ENST00000466141 CARD14Q9BXL6 1004 aa9.7□□□□□ -0.86
RPUSD3-212ENST00000466141 RTL1A6NKG5 1358 aa9.7□□□□□ -0.86
RPUSD3-212ENST00000466141 C10orf71Q711Q0 1435 aa9.7□□□□□ -0.86
RPUSD3-212ENST00000466141 FCHSD2O94868 740 aa9.69□□□□□ -0.86
RPUSD3-212ENST00000466141 CLSTN1O94985 981 aa9.69□□□□□ -0.86
RPUSD3-212ENST00000466141 HSP90AB2PQ58FF8 381 aa9.69□□□□□ -0.86
RPUSD3-212ENST00000466141 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.69□□□□□ -0.86
RPUSD3-212ENST00000466141 SMG6Q86US8 1419 aaKnown RBP9.69□□□□□ -0.86
RPUSD3-212ENST00000466141 GGNBP2Q9H3C7 697 aa9.69□□□□□ -0.86
RPUSD3-212ENST00000466141 ASAP1Q9ULH1 1129 aa9.69□□□□□ -0.86
RPUSD3-212ENST00000466141 PKD1L3Q7Z443 1732 aa9.68□□□□□ -0.86
RPUSD3-212ENST00000466141 ECM2O94769 699 aaPredicted RBP9.68□□□□□ -0.86
RPUSD3-212ENST00000466141 TGFB2P61812 414 aa9.68□□□□□ -0.86
RPUSD3-212ENST00000466141 NEUROD2Q15784 382 aa9.68□□□□□ -0.86
RPUSD3-212ENST00000466141 RRAGCQ9HB90 399 aa9.68□□□□□ -0.86
RPUSD3-212ENST00000466141 BRCA1P38398 1863 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms