RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 TRIM47Q96LD4 638 aa8.87□□□□□ -0.99
SPTA1-202ENST00000461624 CCDC18Q5T9S5 1454 aa8.87□□□□□ -0.99
SPTA1-202ENST00000461624 SHPRHQ149N8 1683 aa8.87□□□□□ -0.99
SPTA1-202ENST00000461624 RTEL1-TNFRSF6BF6WH68 1400 aa8.87□□□□□ -0.99
SPTA1-202ENST00000461624 TIAM1Q13009 1591 aa8.86□□□□□ -0.99
SPTA1-202ENST00000461624 LTKP29376 864 aa8.86□□□□□ -0.99
SPTA1-202ENST00000461624 ZBTB3Q9H5J0 574 aa8.86□□□□□ -0.99
SPTA1-202ENST00000461624 ATP1B4Q9UN42 357 aaPredicted RBP8.86□□□□□ -0.99
SPTA1-202ENST00000461624 WASF2Q9Y6W5 498 aa8.86□□□□□ -0.99
SPTA1-202ENST00000461624 FGD6Q6ZV73 1430 aa8.86□□□□□ -0.99
SPTA1-202ENST00000461624 NWD1Q149M9 1564 aa8.86□□□□□ -0.99
SPTA1-202ENST00000461624 ERVK-7P63135 1459 aa8.85□□□□□ -0.99
SPTA1-202ENST00000461624 CAMSAP2Q08AD1 1489 aa8.85□□□□□ -0.99
SPTA1-202ENST00000461624 ZNF772Q68DY9 489 aaPredicted RBP8.85□□□□□ -0.99
SPTA1-202ENST00000461624 LYPD8Q6UX82 237 aa8.85□□□□□ -0.99
SPTA1-202ENST00000461624 ZNF511Q8NB15 262 aa8.85□□□□□ -0.99
SPTA1-202ENST00000461624 CASKIN1Q8WXD9 1431 aa8.85□□□□□ -0.99
SPTA1-202ENST00000461624 ABCC3O15438 1527 aa8.85□□□□□ -0.99
SPTA1-202ENST00000461624 PRDM15P57071 1507 aaPredicted RBP8.85□□□□□ -0.99
SPTA1-202ENST00000461624 RGS12O14924 1447 aa8.84□□□□□ -0.99
SPTA1-202ENST00000461624 VARSP26640 1264 aaKnown RBP8.84□□□□□ -0.99
SPTA1-202ENST00000461624 MPNDQ8N594 471 aa8.84□□□□□ -0.99
SPTA1-202ENST00000461624 ZNF777Q9ULD5 760 aaPredicted RBP8.84□□□□□ -0.99
SPTA1-202ENST00000461624 AHDC1Q5TGY3 1603 aaPredicted RBP8.83□□□□□ -1
SPTA1-202ENST00000461624 NKTRP30414 1462 aaKnown RBP8.83□□□□□ -1
SPTA1-202ENST00000461624 SPATA31A6Q5VVP1 1343 aa8.83□□□□□ -1
SPTA1-202ENST00000461624 DIP2AQ14689 1571 aa8.83□□□□□ -1
SPTA1-202ENST00000461624 HRCP23327 699 aa8.83□□□□□ -1
SPTA1-202ENST00000461624 LINC01559Q495D7 138 aa8.83□□□□□ -1
SPTA1-202ENST00000461624 RIC3Q7Z5B4 369 aa8.83□□□□□ -1
SPTA1-202ENST00000461624 BAP1Q92560 729 aa8.83□□□□□ -1
SPTA1-202ENST00000461624 SLC24A3Q9HC58 644 aa8.83□□□□□ -1
SPTA1-202ENST00000461624 PCDHB15Q9Y5E8 787 aa8.83□□□□□ -1
SPTA1-202ENST00000461624 TET3O43151 1660 aa8.83□□□□□ -1
SPTA1-202ENST00000461624 PLEKHG3A1L390 1219 aa8.82□□□□□ -1
SPTA1-202ENST00000461624 CFAP99D6REC4 459 aa8.82□□□□□ -1
SPTA1-202ENST00000461624 WFS1O76024 890 aa8.82□□□□□ -1
SPTA1-202ENST00000461624 SNRPBP14678 240 aaKnown RBP8.82□□□□□ -1
SPTA1-202ENST00000461624 PDE4DQ08499 809 aa8.82□□□□□ -1
SPTA1-202ENST00000461624 TUSC1Q2TAM9 212 aa8.82□□□□□ -1
SPTA1-202ENST00000461624 MROH1Q8NDA8 1641 aa8.82□□□□□ -1
SPTA1-202ENST00000461624 KDM5AP29375 1690 aaKnown RBP8.81□□□□□ -1
SPTA1-202ENST00000461624 WASHC2CQ9Y4E1 1318 aa8.81□□□□□ -1
SPTA1-202ENST00000461624 KIF3BO15066 747 aa8.81□□□□□ -1
SPTA1-202ENST00000461624 F12P00748 615 aaPredicted RBP8.81□□□□□ -1
SPTA1-202ENST00000461624 PRKCSHP14314 528 aaPredicted RBP8.81□□□□□ -1
SPTA1-202ENST00000461624 RXRBP28702 533 aa8.81□□□□□ -1
SPTA1-202ENST00000461624 CTHP32929 405 aa8.81□□□□□ -1
SPTA1-202ENST00000461624 CAPN5O15484 640 aaPredicted RBP8.8□□□□□ -1
SPTA1-202ENST00000461624 NFX1Q12986 1120 aaKnown RBP8.8□□□□□ -1
SPTA1-202ENST00000461624 TLL2Q9Y6L7 1015 aa8.8□□□□□ -1
SPTA1-202ENST00000461624 LRP5O75197 1615 aa8.8□□□□□ -1
SPTA1-202ENST00000461624 ZNF644Q9H582 1327 aaPredicted RBP8.8□□□□□ -1
SPTA1-202ENST00000461624 FYCO1Q9BQS8 1478 aa8.79□□□□□ -1
SPTA1-202ENST00000461624 KCNA6P17658 529 aa8.79□□□□□ -1
SPTA1-202ENST00000461624 MYSM1Q5VVJ2 828 aa8.79□□□□□ -1
SPTA1-202ENST00000461624 SLAIN2Q9P270 581 aa8.79□□□□□ -1
SPTA1-202ENST00000461624 CFDP1Q9UEE9 299 aaPredicted RBP8.79□□□□□ -1
SPTA1-202ENST00000461624 FAM174AQ8TBP5 190 aa8.78□□□□□ -1
SPTA1-202ENST00000461624 CABLES1Q8TDN4 633 aa8.78□□□□□ -1
SPTA1-202ENST00000461624 CFAP65Q6ZU64 1925 aaKnown RBP8.78□□□□□ -1
SPTA1-202ENST00000461624 MAST1Q9Y2H9 1570 aa8.78□□□□□ -1
SPTA1-202ENST00000461624 PIK3C2BO00750 1634 aa8.77□□□□□ -1.01
SPTA1-202ENST00000461624 TMEM2Q9UHN6 1383 aa8.77□□□□□ -1.01
SPTA1-202ENST00000461624 TERTO14746 1132 aaKnown RBP8.77□□□□□ -1.01
SPTA1-202ENST00000461624 TXNDC2Q86VQ3 553 aa8.77□□□□□ -1.01
SPTA1-202ENST00000461624 MAP10Q9P2G4 905 aa8.77□□□□□ -1.01
SPTA1-202ENST00000461624 AFF2P51816 1311 aa8.77□□□□□ -1.01
SPTA1-202ENST00000461624 CEP152O94986 1710 aa8.77□□□□□ -1.01
SPTA1-202ENST00000461624 CCDC141Q6ZP82 1450 aa8.77□□□□□ -1.01
SPTA1-202ENST00000461624 MSH6P52701 1360 aa8.76□□□□□ -1.01
SPTA1-202ENST00000461624 CCNB3Q8WWL7 1395 aa8.76□□□□□ -1.01
SPTA1-202ENST00000461624 WIPF1O43516 503 aa8.76□□□□□ -1.01
SPTA1-202ENST00000461624 NNTQ13423 1086 aa8.76□□□□□ -1.01
SPTA1-202ENST00000461624 CSPP1Q1MSJ5 1256 aa8.76□□□□□ -1.01
SPTA1-202ENST00000461624 TRIM46Q7Z4K8 759 aa8.76□□□□□ -1.01
SPTA1-202ENST00000461624 LIMD1Q9UGP4 676 aa8.76□□□□□ -1.01
SPTA1-202ENST00000461624 LILRB3O75022 631 aa8.75□□□□□ -1.01
SPTA1-202ENST00000461624 BMP1P13497 986 aa8.75□□□□□ -1.01
SPTA1-202ENST00000461624 MEX3CQ5U5Q3 659 aaKnown RBP8.75□□□□□ -1.01
SPTA1-202ENST00000461624 PROSER2Q86WR7 435 aaPredicted RBP8.75□□□□□ -1.01
SPTA1-202ENST00000461624 EIF2AK4Q9P2K8 1649 aaKnown RBP8.75□□□□□ -1.01
SPTA1-202ENST00000461624 CHD2O14647 1828 aaKnown RBP8.75□□□□□ -1.01
SPTA1-202ENST00000461624 ATAD2Q6PL18 1390 aa8.74□□□□□ -1.01
SPTA1-202ENST00000461624 ARHGAP31Q2M1Z3 1444 aa8.74□□□□□ -1.01
SPTA1-202ENST00000461624 NUTM2BA6NNL0 878 aaPredicted RBP8.74□□□□□ -1.01
SPTA1-202ENST00000461624 NUTM2EB1AL46 878 aaPredicted RBP8.74□□□□□ -1.01
SPTA1-202ENST00000461624 ADH1CP00326 375 aa8.74□□□□□ -1.01
SPTA1-202ENST00000461624 QPCTQ16769 361 aa8.74□□□□□ -1.01
SPTA1-202ENST00000461624 NUTM2DQ5VT03 806 aaPredicted RBP8.74□□□□□ -1.01
SPTA1-202ENST00000461624 NUTM2AQ8IVF1 878 aaPredicted RBP8.74□□□□□ -1.01
SPTA1-202ENST00000461624 ARMC2Q8NEN0 867 aa8.74□□□□□ -1.01
SPTA1-202ENST00000461624 HELBQ8NG08 1087 aaPredicted RBP8.74□□□□□ -1.01
SPTA1-202ENST00000461624 CDK15Q96Q40 435 aa8.74□□□□□ -1.01
SPTA1-202ENST00000461624 CEP350Q5VT06 3117 aa8.74□□□□□ -1.01
SPTA1-202ENST00000461624 PER1O15534 1290 aaPredicted RBP8.73□□□□□ -1.01
SPTA1-202ENST00000461624 CLK2P49760 499 aaKnown RBP8.73□□□□□ -1.01
SPTA1-202ENST00000461624 RBM6P78332 1123 aaKnown RBP8.73□□□□□ -1.01
SPTA1-202ENST00000461624 BPHLQ86WA6 291 aaPredicted RBP8.73□□□□□ -1.01
SPTA1-202ENST00000461624 FOXJ1Q92949 421 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms