RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 CCDC102AQ96A19 550 aa9.87□□□□□ -0.83
BRCC3-208ENST00000453705 CDC42BPGQ6DT37 1551 aa9.87□□□□□ -0.83
BRCC3-208ENST00000453705 XRN1Q8IZH2 1706 aaKnown RBP9.87□□□□□ -0.83
BRCC3-208ENST00000453705 TCEAL1Q15170 157 aa9.87□□□□□ -0.83
BRCC3-208ENST00000453705 PROCA1Q8NCQ7 364 aaPredicted RBP9.87□□□□□ -0.83
BRCC3-208ENST00000453705 MRS2Q9HD23 443 aa9.87□□□□□ -0.83
BRCC3-208ENST00000453705 ATP7BP35670 1465 aa9.86□□□□□ -0.83
BRCC3-208ENST00000453705 USTQ9Y2C2 406 aa9.86□□□□□ -0.83
BRCC3-208ENST00000453705 FBXO31Q5XUX0 539 aaPredicted RBP9.86□□□□□ -0.83
BRCC3-208ENST00000453705 MAGEC2Q9UBF1 373 aaPredicted RBP9.86□□□□□ -0.83
BRCC3-208ENST00000453705 NRBP1Q9UHY1 535 aa9.86□□□□□ -0.83
BRCC3-208ENST00000453705 IQSEC3Q9UPP2 1182 aaPredicted RBP9.86□□□□□ -0.83
BRCC3-208ENST00000453705 TMEM88BA6NKF7 163 aa9.85□□□□□ -0.83
BRCC3-208ENST00000453705 VRTNQ9H8Y1 702 aa9.85□□□□□ -0.83
BRCC3-208ENST00000453705 RBM19Q9Y4C8 960 aaKnown RBP9.85□□□□□ -0.83
BRCC3-208ENST00000453705 ANKRD36BQ8N2N9 1353 aa9.85□□□□□ -0.83
BRCC3-208ENST00000453705 ITSN1Q15811 1721 aa9.85□□□□□ -0.83
BRCC3-208ENST00000453705 SRPK2P78362 688 aaKnown RBP9.85□□□□□ -0.83
BRCC3-208ENST00000453705 CCDC144BQ3MJ40 725 aa9.85□□□□□ -0.83
BRCC3-208ENST00000453705 C4orf46Q504U0 113 aa9.85□□□□□ -0.83
BRCC3-208ENST00000453705 PANK3Q9H999 370 aa9.85□□□□□ -0.83
BRCC3-208ENST00000453705 ATAD2Q6PL18 1390 aa9.85□□□□□ -0.83
BRCC3-208ENST00000453705 NRKQ7Z2Y5 1582 aa9.84□□□□□ -0.83
BRCC3-208ENST00000453705 LRRC7Q96NW7 1537 aa9.84□□□□□ -0.83
BRCC3-208ENST00000453705 PLEKHG1Q9ULL1 1385 aa9.84□□□□□ -0.83
BRCC3-208ENST00000453705 RNF123Q5XPI4 1314 aa9.84□□□□□ -0.83
BRCC3-208ENST00000453705 KCNB2Q92953 911 aa9.84□□□□□ -0.83
BRCC3-208ENST00000453705 GOPCQ9HD26 462 aa9.84□□□□□ -0.83
BRCC3-208ENST00000453705 TMA7Q9Y2S6 64 aaKnown RBP9.84□□□□□ -0.83
BRCC3-208ENST00000453705 POLR3AO14802 1390 aaPredicted RBP9.83□□□□□ -0.84
BRCC3-208ENST00000453705 TMEM2Q9UHN6 1383 aa9.83□□□□□ -0.84
BRCC3-208ENST00000453705 STK10O94804 968 aaKnown RBP9.83□□□□□ -0.84
BRCC3-208ENST00000453705 SMYD5Q6GMV2 418 aa9.83□□□□□ -0.84
BRCC3-208ENST00000453705 ADAMTS19Q8TE59 1207 aa9.83□□□□□ -0.84
BRCC3-208ENST00000453705 CD163L1Q9NR16 1453 aa9.83□□□□□ -0.84
BRCC3-208ENST00000453705 GOLGA6CA6NDK9 693 aa9.83□□□□□ -0.84
BRCC3-208ENST00000453705 GOLGA6BA6NDN3 693 aa9.83□□□□□ -0.84
BRCC3-208ENST00000453705 GOLGA6DP0CG33 693 aa9.83□□□□□ -0.84
BRCC3-208ENST00000453705 TSNAXIP1Q2TAA8 658 aa9.83□□□□□ -0.84
BRCC3-208ENST00000453705 NGEFQ8N5V2 710 aa9.83□□□□□ -0.84
BRCC3-208ENST00000453705 GOLGA6AQ9NYA3 693 aa9.83□□□□□ -0.84
BRCC3-208ENST00000453705 EVC2Q86UK5 1308 aa9.82□□□□□ -0.84
BRCC3-208ENST00000453705 FANCIQ9NVI1 1328 aa9.82□□□□□ -0.84
BRCC3-208ENST00000453705 GPR37O15354 613 aa9.82□□□□□ -0.84
BRCC3-208ENST00000453705 PDE3BQ13370 1112 aa9.82□□□□□ -0.84
BRCC3-208ENST00000453705 SF3A1Q15459 793 aaKnown RBP9.82□□□□□ -0.84
BRCC3-208ENST00000453705 ZKSCAN2Q63HK3 967 aa9.82□□□□□ -0.84
BRCC3-208ENST00000453705 SDE2Q6IQ49 451 aa9.82□□□□□ -0.84
BRCC3-208ENST00000453705 STAG1Q8WVM7 1258 aa9.82□□□□□ -0.84
BRCC3-208ENST00000453705 CTDP1Q9Y5B0 961 aaPredicted RBP9.82□□□□□ -0.84
BRCC3-208ENST00000453705 REPIN1Q9BWE0 567 aaKnown RBP9.82□□□□□ -0.84
BRCC3-208ENST00000453705 ARHGEF10LQ9HCE6 1279 aa9.82□□□□□ -0.84
BRCC3-208ENST00000453705 ADAMTS13Q76LX8 1427 aa9.82□□□□□ -0.84
BRCC3-208ENST00000453705 NALCNQ8IZF0 1738 aa9.81□□□□□ -0.84
BRCC3-208ENST00000453705 TLDC2A0PJX2 215 aa9.81□□□□□ -0.84
BRCC3-208ENST00000453705 HOXA2O43364 376 aa9.81□□□□□ -0.84
BRCC3-208ENST00000453705 HDGFP51858 240 aaKnown RBP9.81□□□□□ -0.84
BRCC3-208ENST00000453705 PPP4CP60510 307 aa9.81□□□□□ -0.84
BRCC3-208ENST00000453705 MKRN1Q9UHC7 482 aaKnown RBP9.81□□□□□ -0.84
BRCC3-208ENST00000453705 PTCH1Q13635 1447 aa9.81□□□□□ -0.84
BRCC3-208ENST00000453705 CEP170BQ9Y4F5 1589 aaPredicted RBP9.81□□□□□ -0.84
BRCC3-208ENST00000453705 SETD1BQ9UPS6 1966 aaKnown RBP9.81□□□□□ -0.84
BRCC3-208ENST00000453705 TBX4P57082 545 aa9.81□□□□□ -0.84
BRCC3-208ENST00000453705 CNGB1Q14028 1251 aaPredicted RBP9.81□□□□□ -0.84
BRCC3-208ENST00000453705 RPS6KC1Q96S38 1066 aa9.81□□□□□ -0.84
BRCC3-208ENST00000453705 MAP3K20Q9NYL2 800 aaKnown RBP9.81□□□□□ -0.84
BRCC3-208ENST00000453705 DMGDHQ9UI17 866 aaKnown RBP9.81□□□□□ -0.84
BRCC3-208ENST00000453705 KLF15Q9UIH9 416 aa9.81□□□□□ -0.84
BRCC3-208ENST00000453705 STAG3Q9UJ98 1225 aa9.81□□□□□ -0.84
BRCC3-208ENST00000453705 HDAC5Q9UQL6 1122 aa9.81□□□□□ -0.84
BRCC3-208ENST00000453705 EXOC5O00471 708 aa9.8□□□□□ -0.84
BRCC3-208ENST00000453705 WDR78Q5VTH9 848 aa9.8□□□□□ -0.84
BRCC3-208ENST00000453705 NPAS4Q8IUM7 802 aa9.8□□□□□ -0.84
BRCC3-208ENST00000453705 CXorf38Q8TB03 319 aa9.8□□□□□ -0.84
BRCC3-208ENST00000453705 WWC3Q9ULE0 1092 aa9.8□□□□□ -0.84
BRCC3-208ENST00000453705 TTC36A6NLP5 189 aa9.8□□□□□ -0.84
BRCC3-208ENST00000453705 SEMA3FQ13275 785 aa9.8□□□□□ -0.84
BRCC3-208ENST00000453705 TTLL12Q14166 644 aaPredicted RBP9.8□□□□□ -0.84
BRCC3-208ENST00000453705 RPUSD2Q8IZ73 545 aaKnown RBP9.8□□□□□ -0.84
BRCC3-208ENST00000453705 KNSTRNQ9Y448 316 aa9.8□□□□□ -0.84
BRCC3-208ENST00000453705 TBX22Q9Y458 520 aa9.8□□□□□ -0.84
BRCC3-208ENST00000453705 PIK3R4Q99570 1358 aa9.8□□□□□ -0.84
BRCC3-208ENST00000453705 HNRNPUQ00839 825 aaKnown RBP eCLIP9.79□□□□□ -0.84
BRCC3-208ENST00000453705 FBXO9Q9UK97 447 aaPredicted RBP9.79□□□□□ -0.84
BRCC3-208ENST00000453705 CHD2O14647 1828 aaKnown RBP9.79□□□□□ -0.84
BRCC3-208ENST00000453705 CFAP69A5D8W1 941 aa9.79□□□□□ -0.84
BRCC3-208ENST00000453705 ERCC5P28715 1186 aaPredicted RBP9.79□□□□□ -0.84
BRCC3-208ENST00000453705 NBPF11Q86T75 865 aa9.79□□□□□ -0.84
BRCC3-208ENST00000453705 TANGO6Q9C0B7 1094 aa9.79□□□□□ -0.84
BRCC3-208ENST00000453705 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.79□□□□□ -0.84
BRCC3-208ENST00000453705 PPP2R1AP30153 589 aa9.79□□□□□ -0.84
BRCC3-208ENST00000453705 TTC30BQ8N4P2 665 aa9.79□□□□□ -0.84
BRCC3-208ENST00000453705 TMC1Q8TDI8 760 aa9.79□□□□□ -0.84
BRCC3-208ENST00000453705 OXER1Q8TDS5 423 aa9.79□□□□□ -0.84
BRCC3-208ENST00000453705 COL3A1P02461 1466 aaPredicted RBP9.78□□□□□ -0.84
BRCC3-208ENST00000453705 IQSEC2Q5JU85 1478 aa9.78□□□□□ -0.84
BRCC3-208ENST00000453705 C7P10643 843 aa9.78□□□□□ -0.84
BRCC3-208ENST00000453705 NSD3Q9BZ95 1437 aa9.78□□□□□ -0.84
BRCC3-208ENST00000453705 CGNL1Q0VF96 1302 aa9.78□□□□□ -0.84
BRCC3-208ENST00000453705 SCP2P22307 547 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms