RNA–Protein interactions for RNA: ENST00000451834.5

CNOT4-207, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNOT4, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-207ENST00000451834 TRIM37O94972 964 aa10.72□□□□□ -0.69
CNOT4-207ENST00000451834 NBPF6Q5VWK0 638 aa10.72□□□□□ -0.69
CNOT4-207ENST00000451834 NBPF4Q96M43 638 aa10.72□□□□□ -0.69
CNOT4-207ENST00000451834 APBA3O96018 575 aa10.71□□□□□ -0.69
CNOT4-207ENST00000451834 IL13P35225 146 aa10.71□□□□□ -0.69
CNOT4-207ENST00000451834 ZCRB1Q8TBF4 217 aaKnown RBP10.71□□□□□ -0.69
CNOT4-207ENST00000451834 SENP3Q9H4L4 574 aaPredicted RBP10.71□□□□□ -0.69
CNOT4-207ENST00000451834 SCN4AP35499 1836 aa10.71□□□□□ -0.69
CNOT4-207ENST00000451834 EIF4G2P78344 907 aaKnown RBP eCLIP10.71□□□□□ -0.69
CNOT4-207ENST00000451834 FANCIQ9NVI1 1328 aa10.71□□□□□ -0.7
CNOT4-207ENST00000451834 AMOTQ4VCS5 1084 aa10.71□□□□□ -0.7
CNOT4-207ENST00000451834 LMOD2Q6P5Q4 547 aa10.7□□□□□ -0.7
CNOT4-207ENST00000451834 HSP90AB1P08238 724 aaKnown RBP10.7□□□□□ -0.7
CNOT4-207ENST00000451834 SSFA2P28290 1259 aa10.7□□□□□ -0.7
CNOT4-207ENST00000451834 SNED1Q8TER0 1413 aa10.7□□□□□ -0.7
CNOT4-207ENST00000451834 DDX10Q13206 875 aaKnown RBP10.7□□□□□ -0.7
CNOT4-207ENST00000451834 VSIG10Q8N0Z9 540 aa10.7□□□□□ -0.7
CNOT4-207ENST00000451834 KIF7Q2M1P5 1343 aa10.69□□□□□ -0.7
CNOT4-207ENST00000451834 PHKG2P15735 406 aa10.69□□□□□ -0.7
CNOT4-207ENST00000451834 LRRC4BQ9NT99 713 aa10.69□□□□□ -0.7
CNOT4-207ENST00000451834 SPON1Q9HCB6 807 aa10.68□□□□□ -0.7
CNOT4-207ENST00000451834 CYP27B1O15528 508 aa10.68□□□□□ -0.7
CNOT4-207ENST00000451834 PALLDQ8WX93 1383 aa10.68□□□□□ -0.7
CNOT4-207ENST00000451834 ARAP2Q8WZ64 1704 aa10.68□□□□□ -0.7
CNOT4-207ENST00000451834 HSPA5P11021 654 aaKnown RBP10.67□□□□□ -0.7
CNOT4-207ENST00000451834 STRN4Q9NRL3 753 aa10.67□□□□□ -0.7
CNOT4-207ENST00000451834 ZNF827Q17R98 1081 aa10.67□□□□□ -0.7
CNOT4-207ENST00000451834 CD2APQ9Y5K6 639 aa10.67□□□□□ -0.7
CNOT4-207ENST00000451834 ZNF609O15014 1411 aa10.67□□□□□ -0.7
CNOT4-207ENST00000451834 EIF4A2Q14240 407 aaKnown RBP10.67□□□□□ -0.7
CNOT4-207ENST00000451834 HTATSF1O43719 755 aaKnown RBP10.66□□□□□ -0.7
CNOT4-207ENST00000451834 STK32BQ9NY57 414 aa10.66□□□□□ -0.7
CNOT4-207ENST00000451834 SPG7Q9UQ90 795 aa10.66□□□□□ -0.7
CNOT4-207ENST00000451834 ZC3H4Q9UPT8 1303 aaKnown RBP10.66□□□□□ -0.7
CNOT4-207ENST00000451834 TATP17735 454 aaPredicted RBP10.66□□□□□ -0.7
CNOT4-207ENST00000451834 PODXL2Q9NZ53 605 aa10.66□□□□□ -0.7
CNOT4-207ENST00000451834 DCAF5Q96JK2 942 aa10.65□□□□□ -0.7
CNOT4-207ENST00000451834 EYA1Q99502 592 aa10.65□□□□□ -0.7
CNOT4-207ENST00000451834 NUTM2GQ5VZR2 741 aa10.64□□□□□ -0.71
CNOT4-207ENST00000451834 BABAM1Q9NWV8 329 aa10.63□□□□□ -0.71
CNOT4-207ENST00000451834 PTF1AQ7RTS3 328 aa10.63□□□□□ -0.71
CNOT4-207ENST00000451834 CCDC88AQ3V6T2 1871 aa10.63□□□□□ -0.71
CNOT4-207ENST00000451834 IFNL2Q8IZJ0 200 aa10.63□□□□□ -0.71
CNOT4-207ENST00000451834 ATP10DQ9P241 1426 aa10.62□□□□□ -0.71
CNOT4-207ENST00000451834 AKAP4Q5JQC9 854 aa10.62□□□□□ -0.71
CNOT4-207ENST00000451834 KAT6BQ8WYB5 2073 aa10.61□□□□□ -0.71
CNOT4-207ENST00000451834 HSP90AB2PQ58FF8 381 aa10.61□□□□□ -0.71
CNOT4-207ENST00000451834 NOP58Q9Y2X3 529 aaKnown RBP10.61□□□□□ -0.71
CNOT4-207ENST00000451834 R3HDM1Q15032 1099 aaKnown RBP10.61□□□□□ -0.71
CNOT4-207ENST00000451834 PKNOX2Q96KN3 472 aa10.61□□□□□ -0.71
CNOT4-207ENST00000451834 PDZRN3Q9UPQ7 1066 aa10.61□□□□□ -0.71
CNOT4-207ENST00000451834 CCDC9Q9Y3X0 531 aaKnown RBP10.61□□□□□ -0.71
CNOT4-207ENST00000451834 ECM29Q5VYK3 1845 aa10.61□□□□□ -0.71
CNOT4-207ENST00000451834 MYH3P11055 1940 aa10.61□□□□□ -0.71
CNOT4-207ENST00000451834 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.6□□□□□ -0.717e-7■■■■□ 23.2
CNOT4-207ENST00000451834 CACNA1SQ13698 1873 aa10.6□□□□□ -0.71
CNOT4-207ENST00000451834 B4GALNT3Q6L9W6 998 aa10.59□□□□□ -0.71
CNOT4-207ENST00000451834 AMPHP49418 695 aa10.59□□□□□ -0.71
CNOT4-207ENST00000451834 ATG3Q9NT62 314 aa10.58□□□□□ -0.72
CNOT4-207ENST00000451834 EMILIN1Q9Y6C2 1016 aa10.58□□□□□ -0.72
CNOT4-207ENST00000451834 PAPPA2Q9BXP8 1791 aa10.58□□□□□ -0.72
CNOT4-207ENST00000451834 ERICH6BQ5W0A0 696 aa10.58□□□□□ -0.72
CNOT4-207ENST00000451834 PIGBQ92521 554 aa10.58□□□□□ -0.72
CNOT4-207ENST00000451834 GGNBP2Q9H3C7 697 aa10.58□□□□□ -0.72
CNOT4-207ENST00000451834 NLRP2Q9NX02 1062 aa10.58□□□□□ -0.72
CNOT4-207ENST00000451834 SOS1Q07889 1333 aaPredicted RBP10.57□□□□□ -0.72
CNOT4-207ENST00000451834 RAPGEF4Q8WZA2 1011 aa10.57□□□□□ -0.72
CNOT4-207ENST00000451834 PANK3Q9H999 370 aa10.57□□□□□ -0.72
CNOT4-207ENST00000451834 COL4A1P02462 1669 aa10.57□□□□□ -0.72
CNOT4-207ENST00000451834 TGFB2P61812 414 aa10.57□□□□□ -0.72
CNOT4-207ENST00000451834 RTL5Q5HYW3 569 aaPredicted RBP10.57□□□□□ -0.72
CNOT4-207ENST00000451834 LTBP3Q9NS15 1303 aa10.57□□□□□ -0.72
CNOT4-207ENST00000451834 PLEKHO1Q53GL0 409 aaPredicted RBP10.57□□□□□ -0.72
CNOT4-207ENST00000451834 KLRG2A4D1S0 409 aaPredicted RBP10.56□□□□□ -0.72
CNOT4-207ENST00000451834 RPS6KA4O75676 772 aa10.55□□□□□ -0.72
CNOT4-207ENST00000451834 TRPM7Q96QT4 1865 aa10.55□□□□□ -0.72
CNOT4-207ENST00000451834 LINC00116Q8NCU8 138 aa10.55□□□□□ -0.72
CNOT4-207ENST00000451834 TMC1Q8TDI8 760 aa10.55□□□□□ -0.72
CNOT4-207ENST00000451834 SLC4A9Q96Q91 983 aa10.55□□□□□ -0.72
CNOT4-207ENST00000451834 ERBB4Q15303 1308 aa10.55□□□□□ -0.72
CNOT4-207ENST00000451834 RRS1Q15050 365 aaKnown RBP10.55□□□□□ -0.72
CNOT4-207ENST00000451834 BRPF3Q9ULD4 1205 aa10.55□□□□□ -0.72
CNOT4-207ENST00000451834 TM4SF1P30408 202 aa10.54□□□□□ -0.72
CNOT4-207ENST00000451834 COL23A1Q86Y22 540 aaPredicted RBP10.54□□□□□ -0.72
CNOT4-207ENST00000451834 TAF1P21675 1872 aa10.54□□□□□ -0.72
CNOT4-207ENST00000451834 CSB-PGBD3P0DP91 1061 aa10.54□□□□□ -0.72
CNOT4-207ENST00000451834 PRIM1P49642 420 aaKnown RBP10.54□□□□□ -0.72
CNOT4-207ENST00000451834 ARXQ96QS3 562 aa10.54□□□□□ -0.72
CNOT4-207ENST00000451834 RSPH6AQ9H0K4 717 aa10.54□□□□□ -0.72
CNOT4-207ENST00000451834 SLC52A2Q9HAB3 445 aa10.54□□□□□ -0.72
CNOT4-207ENST00000451834 SYT17Q9BSW7 474 aa10.53□□□□□ -0.72
CNOT4-207ENST00000451834 PLEKHF1Q96S99 279 aa10.53□□□□□ -0.72
CNOT4-207ENST00000451834 USP42Q9H9J4 1324 aaKnown RBP10.53□□□□□ -0.72
CNOT4-207ENST00000451834 LOC102724428A0A0B4J2F2 783 aa10.53□□□□□ -0.72
CNOT4-207ENST00000451834 SIK1P57059 783 aa10.53□□□□□ -0.72
CNOT4-207ENST00000451834 RNF123Q5XPI4 1314 aa10.53□□□□□ -0.72
CNOT4-207ENST00000451834 ITPK1Q13572 414 aa10.52□□□□□ -0.73
CNOT4-207ENST00000451834 CCNL1Q9UK58 526 aaPredicted RBP10.52□□□□□ -0.73
CNOT4-207ENST00000451834 LAS1LQ9Y4W2 734 aaKnown RBP10.52□□□□□ -0.73
CNOT4-207ENST00000451834 INTS5Q6P9B9 1019 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms