RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 ABTB2Q8N961 1025 aa9.64□□□□□ -0.87
TRIM4-204ENST00000447480 UPF1Q92900 1129 aaKnown RBP eCLIP9.64□□□□□ -0.872e-10■□□□□ 10.2
TRIM4-204ENST00000447480 COG3Q96JB2 828 aa9.64□□□□□ -0.87
TRIM4-204ENST00000447480 SLC12A5Q9H2X9 1139 aa9.64□□□□□ -0.87
TRIM4-204ENST00000447480 UPF2Q9HAU5 1272 aaKnown RBP9.64□□□□□ -0.87
TRIM4-204ENST00000447480 ERBB3P21860 1342 aa9.63□□□□□ -0.87
TRIM4-204ENST00000447480 TRPM3Q9HCF6 1732 aaPredicted RBP9.63□□□□□ -0.87
TRIM4-204ENST00000447480 HS3ST6Q96QI5 342 aa9.63□□□□□ -0.87
TRIM4-204ENST00000447480 PANK3Q9H999 370 aa9.63□□□□□ -0.87
TRIM4-204ENST00000447480 BRPF3Q9ULD4 1205 aa9.63□□□□□ -0.87
TRIM4-204ENST00000447480 PXDNQ92626 1479 aa9.63□□□□□ -0.87
TRIM4-204ENST00000447480 COL16A1Q07092 1604 aaPredicted RBP9.63□□□□□ -0.87
TRIM4-204ENST00000447480 COL22A1Q8NFW1 1626 aaPredicted RBP9.63□□□□□ -0.87
TRIM4-204ENST00000447480 MED1Q15648 1581 aaPredicted RBP9.63□□□□□ -0.87
TRIM4-204ENST00000447480 SPATA31A3Q5VYP0 1347 aa9.62□□□□□ -0.87
TRIM4-204ENST00000447480 TTC21BQ7Z4L5 1316 aa9.62□□□□□ -0.87
TRIM4-204ENST00000447480 ALS2Q96Q42 1657 aa9.62□□□□□ -0.87
TRIM4-204ENST00000447480 CLCN1P35523 988 aa9.62□□□□□ -0.87
TRIM4-204ENST00000447480 DUSP27Q5VZP5 1158 aa9.62□□□□□ -0.87
TRIM4-204ENST00000447480 OXER1Q8TDS5 423 aa9.62□□□□□ -0.87
TRIM4-204ENST00000447480 NSD3Q9BZ95 1437 aa9.62□□□□□ -0.87
TRIM4-204ENST00000447480 KIF24Q5T7B8 1368 aa9.62□□□□□ -0.87
TRIM4-204ENST00000447480 USP31Q70CQ4 1352 aa9.62□□□□□ -0.87
TRIM4-204ENST00000447480 ABCC6O95255 1503 aa9.61□□□□□ -0.87
TRIM4-204ENST00000447480 E9PSI1 815 aa9.61□□□□□ -0.87
TRIM4-204ENST00000447480 SLFN5Q08AF3 891 aa9.61□□□□□ -0.87
TRIM4-204ENST00000447480 LMOD2Q6P5Q4 547 aa9.61□□□□□ -0.87
TRIM4-204ENST00000447480 CDAN1Q8IWY9 1227 aa9.61□□□□□ -0.87
TRIM4-204ENST00000447480 CD163L1Q9NR16 1453 aa9.6□□□□□ -0.87
TRIM4-204ENST00000447480 SSH2Q76I76 1423 aa9.6□□□□□ -0.87
TRIM4-204ENST00000447480 WDR43Q15061 677 aaKnown RBP eCLIP9.6□□□□□ -0.87
TRIM4-204ENST00000447480 VARS2Q5ST30 1063 aaKnown RBP9.6□□□□□ -0.87
TRIM4-204ENST00000447480 FSD2A1L4K1 749 aa9.59□□□□□ -0.87
TRIM4-204ENST00000447480 TBC1D12O60347 775 aa9.59□□□□□ -0.87
TRIM4-204ENST00000447480 FRAT2O75474 233 aaPredicted RBP9.59□□□□□ -0.87
TRIM4-204ENST00000447480 MRE11P49959 708 aa9.59□□□□□ -0.87
TRIM4-204ENST00000447480 TERF1P54274 439 aa9.59□□□□□ -0.87
TRIM4-204ENST00000447480 EMILIN3Q9NT22 766 aa9.59□□□□□ -0.87
TRIM4-204ENST00000447480 PIK3C2AO00443 1686 aa9.58□□□□□ -0.88
TRIM4-204ENST00000447480 MORC1Q86VD1 984 aa9.58□□□□□ -0.88
TRIM4-204ENST00000447480 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.58□□□□□ -0.88
TRIM4-204ENST00000447480 CDCA7LQ96GN5 454 aa9.58□□□□□ -0.88
TRIM4-204ENST00000447480 MARF1Q9Y4F3 1742 aaKnown RBP9.57□□□□□ -0.88
TRIM4-204ENST00000447480 GOLGA6L3A6NEY3 463 aa9.57□□□□□ -0.88
TRIM4-204ENST00000447480 CT47B1P0C2W7 299 aaPredicted RBP9.57□□□□□ -0.88
TRIM4-204ENST00000447480 SKOR2Q2VWA4 1001 aaPredicted RBP9.57□□□□□ -0.88
TRIM4-204ENST00000447480 CFAP53Q96M91 514 aa9.57□□□□□ -0.88
TRIM4-204ENST00000447480 ANTXR1Q9H6X2 564 aa9.57□□□□□ -0.88
TRIM4-204ENST00000447480 LHX6Q9UPM6 363 aa9.57□□□□□ -0.88
TRIM4-204ENST00000447480 RTL1A6NKG5 1358 aa9.57□□□□□ -0.88
TRIM4-204ENST00000447480 AATKQ6ZMQ8 1374 aa9.57□□□□□ -0.88
TRIM4-204ENST00000447480 USP19O94966 1318 aa9.56□□□□□ -0.88
TRIM4-204ENST00000447480 SLIT3O75094 1523 aa9.56□□□□□ -0.88
TRIM4-204ENST00000447480 PHRF1Q9P1Y6 1649 aaKnown RBP9.56□□□□□ -0.88
TRIM4-204ENST00000447480 PNPLA6Q8IY17 1366 aa9.56□□□□□ -0.88
TRIM4-204ENST00000447480 PNNQ9H307 717 aaKnown RBP9.56□□□□□ -0.88
TRIM4-204ENST00000447480 OVOS2A0A0J9YW53 1432 aa9.56□□□□□ -0.88
TRIM4-204ENST00000447480 OVOS2Q6IE36 1432 aa9.56□□□□□ -0.88
TRIM4-204ENST00000447480 FAM208AQ9UK61 1670 aaKnown RBP9.55□□□□□ -0.88
TRIM4-204ENST00000447480 CPDO75976 1380 aa9.55□□□□□ -0.88
TRIM4-204ENST00000447480 MAP2P11137 1827 aaKnown RBP9.55□□□□□ -0.88
TRIM4-204ENST00000447480 DDX11L8A8MPP1 907 aa9.55□□□□□ -0.88
TRIM4-204ENST00000447480 FYB1O15117 783 aa9.55□□□□□ -0.88
TRIM4-204ENST00000447480 TPM2P07951 284 aa9.55□□□□□ -0.88
TRIM4-204ENST00000447480 HSPA1LP34931 641 aa9.55□□□□□ -0.88
TRIM4-204ENST00000447480 CAMK2BQ13554 666 aa9.55□□□□□ -0.88
TRIM4-204ENST00000447480 MEX3CQ5U5Q3 659 aaKnown RBP9.55□□□□□ -0.88
TRIM4-204ENST00000447480 WDR70Q9NW82 654 aa9.55□□□□□ -0.88
TRIM4-204ENST00000447480 CHMP5Q9NZZ3 219 aa9.55□□□□□ -0.88
TRIM4-204ENST00000447480 PCDH10Q9P2E7 1040 aa9.55□□□□□ -0.88
TRIM4-204ENST00000447480 ADAMTS8Q9UP79 889 aa9.55□□□□□ -0.88
TRIM4-204ENST00000447480 ABCA3Q99758 1704 aa9.55□□□□□ -0.88
TRIM4-204ENST00000447480 COL14A1Q05707 1796 aaKnown RBP9.55□□□□□ -0.88
TRIM4-204ENST00000447480 NWD2Q9ULI1 1742 aa9.54□□□□□ -0.88
TRIM4-204ENST00000447480 GCP02774 474 aa9.54□□□□□ -0.88
TRIM4-204ENST00000447480 HSP90AA1P07900 732 aaKnown RBP9.54□□□□□ -0.88
TRIM4-204ENST00000447480 PPP2R1AP30153 589 aa9.54□□□□□ -0.88
TRIM4-204ENST00000447480 XPCQ01831 940 aaPredicted RBP9.54□□□□□ -0.88
TRIM4-204ENST00000447480 TBC1D32Q96NH3 1257 aa9.54□□□□□ -0.88
TRIM4-204ENST00000447480 LTN1O94822 1766 aa9.54□□□□□ -0.88
TRIM4-204ENST00000447480 CRYBG1Q9Y4K1 1723 aa9.53□□□□□ -0.88
TRIM4-204ENST00000447480 PLIN1O60240 522 aa9.53□□□□□ -0.88
TRIM4-204ENST00000447480 MAP3K9P80192 1104 aa9.53□□□□□ -0.88
TRIM4-204ENST00000447480 NME9Q86XW9 330 aa9.53□□□□□ -0.88
TRIM4-204ENST00000447480 CLUAP1Q96AJ1 413 aa9.53□□□□□ -0.88
TRIM4-204ENST00000447480 MAP7D2Q96T17 732 aa9.53□□□□□ -0.88
TRIM4-204ENST00000447480 CARD14Q9BXL6 1004 aa9.53□□□□□ -0.88
TRIM4-204ENST00000447480 RWDD1Q9H446 243 aaPredicted RBP9.53□□□□□ -0.88
TRIM4-204ENST00000447480 FLT4P35916 1363 aa9.52□□□□□ -0.88
TRIM4-204ENST00000447480 VIRMAQ69YN4 1812 aaKnown RBP9.52□□□□□ -0.89
TRIM4-204ENST00000447480 MCM4P33991 863 aa9.52□□□□□ -0.89
TRIM4-204ENST00000447480 AMPHP49418 695 aa9.52□□□□□ -0.89
TRIM4-204ENST00000447480 CCDC27Q2M243 656 aa9.52□□□□□ -0.89
TRIM4-204ENST00000447480 WDR63Q8IWG1 891 aa9.52□□□□□ -0.89
TRIM4-204ENST00000447480 GGNBP2Q9H3C7 697 aa9.52□□□□□ -0.89
TRIM4-204ENST00000447480 PRDM11Q9NQV5 511 aa9.52□□□□□ -0.89
TRIM4-204ENST00000447480 PLEKHG2Q9H7P9 1386 aa9.51□□□□□ -0.89
TRIM4-204ENST00000447480 DPYSL4O14531 572 aa9.51□□□□□ -0.89
TRIM4-204ENST00000447480 EVI5O60447 810 aa9.51□□□□□ -0.89
TRIM4-204ENST00000447480 HSP90AA2PQ14568 343 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms