RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 GOLGA6L4A6NEF3 574 aa9.01□□□□□ -0.97
CNOT4-206ENST00000428680 ARHGEF25Q86VW2 580 aa9.01□□□□□ -0.97
CNOT4-206ENST00000428680 PRM3Q9NNZ6 103 aa9.01□□□□□ -0.97
CNOT4-206ENST00000428680 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.01□□□□□ -0.975e-9■■■■■ 32.1
CNOT4-206ENST00000428680 ZPR1O75312 459 aa9.01□□□□□ -0.97
CNOT4-206ENST00000428680 GRM1Q13255 1194 aa9.01□□□□□ -0.97
CNOT4-206ENST00000428680 BRWD3Q6RI45 1802 aa9.01□□□□□ -0.97
CNOT4-206ENST00000428680 ANKRD36BQ8N2N9 1353 aa9.01□□□□□ -0.97
CNOT4-206ENST00000428680 RASSF8Q8NHQ8 419 aa9.01□□□□□ -0.97
CNOT4-206ENST00000428680 TTLL12Q14166 644 aaPredicted RBP9.01□□□□□ -0.97
CNOT4-206ENST00000428680 BICDL1Q6ZP65 573 aa9.01□□□□□ -0.97
CNOT4-206ENST00000428680 GGNBP2Q9H3C7 697 aa9□□□□□ -0.97
CNOT4-206ENST00000428680 RALBP1Q15311 655 aa9□□□□□ -0.97
CNOT4-206ENST00000428680 IRX6P78412 446 aaPredicted RBP9□□□□□ -0.97
CNOT4-206ENST00000428680 RGPD8O14715 1765 aaPredicted RBP9□□□□□ -0.97
CNOT4-206ENST00000428680 RGS3P49796 1198 aa9□□□□□ -0.97
CNOT4-206ENST00000428680 RBM5P52756 815 aaKnown RBP eCLIP9□□□□□ -0.97
CNOT4-206ENST00000428680 BECN1Q14457 450 aa9□□□□□ -0.97
CNOT4-206ENST00000428680 IP6K1Q92551 441 aa9□□□□□ -0.97
CNOT4-206ENST00000428680 DDX17Q92841 729 aaKnown RBP9□□□□□ -0.97
CNOT4-206ENST00000428680 LRRC37A3O60309 1634 aa8.99□□□□□ -0.97
CNOT4-206ENST00000428680 PCDH11XQ9BZA7 1347 aa8.99□□□□□ -0.97
CNOT4-206ENST00000428680 PCDH11YQ9BZA8 1340 aa8.99□□□□□ -0.97
CNOT4-206ENST00000428680 NUP188Q5SRE5 1749 aa8.99□□□□□ -0.97
CNOT4-206ENST00000428680 PLIN1O60240 522 aa8.99□□□□□ -0.97
CNOT4-206ENST00000428680 ANP32EQ9BTT0 268 aa8.99□□□□□ -0.97
CNOT4-206ENST00000428680 AK7Q96M32 723 aa8.99□□□□□ -0.97
CNOT4-206ENST00000428680 TSPYL4Q9UJ04 414 aa8.99□□□□□ -0.97
CNOT4-206ENST00000428680 IKQ13123 557 aaPredicted RBP8.98□□□□□ -0.97
CNOT4-206ENST00000428680 ZNF530Q6P9A1 599 aaPredicted RBP8.98□□□□□ -0.97
CNOT4-206ENST00000428680 CLEC11AQ9Y240 323 aa8.98□□□□□ -0.97
CNOT4-206ENST00000428680 TRIM6-TRIM34B2RNG4 842 aa8.98□□□□□ -0.97
CNOT4-206ENST00000428680 APPP05067 770 aa8.98□□□□□ -0.97
CNOT4-206ENST00000428680 BEGAINQ9BUH8 593 aa8.98□□□□□ -0.97
CNOT4-206ENST00000428680 PANK3Q9H999 370 aa8.98□□□□□ -0.97
CNOT4-206ENST00000428680 TMOD2Q9NZR1 351 aa8.98□□□□□ -0.97
CNOT4-206ENST00000428680 FKBP5Q13451 457 aaPredicted RBP8.97□□□□□ -0.97
CNOT4-206ENST00000428680 CCDC27Q2M243 656 aa8.97□□□□□ -0.97
CNOT4-206ENST00000428680 CABP1Q9NZU7 370 aa8.97□□□□□ -0.97
CNOT4-206ENST00000428680 CCDC146Q8IYE0 955 aa8.97□□□□□ -0.97
CNOT4-206ENST00000428680 GAS2L2Q8NHY3 880 aa8.97□□□□□ -0.97
CNOT4-206ENST00000428680 SLC4A3P48751 1232 aa8.97□□□□□ -0.97
CNOT4-206ENST00000428680 MTHFSP49914 203 aa8.97□□□□□ -0.97
CNOT4-206ENST00000428680 PEAK1Q9H792 1746 aa8.97□□□□□ -0.97
CNOT4-206ENST00000428680 MAP3K19Q56UN5 1328 aa8.97□□□□□ -0.97
CNOT4-206ENST00000428680 NFAT5O94916 1531 aa8.97□□□□□ -0.97
CNOT4-206ENST00000428680 HMOX1P09601 288 aa8.96□□□□□ -0.97
CNOT4-206ENST00000428680 AKAP17AQ02040 695 aaKnown RBP8.96□□□□□ -0.97
CNOT4-206ENST00000428680 AMER1Q5JTC6 1135 aaPredicted RBP8.96□□□□□ -0.97
CNOT4-206ENST00000428680 ZNF219Q9P2Y4 722 aaPredicted RBP8.96□□□□□ -0.97
CNOT4-206ENST00000428680 FLT4P35916 1363 aa8.96□□□□□ -0.97
CNOT4-206ENST00000428680 ADRA2BP18089 450 aa8.96□□□□□ -0.97
CNOT4-206ENST00000428680 STARD3NLO95772 234 aa8.96□□□□□ -0.98
CNOT4-206ENST00000428680 CCDC43Q96MW1 224 aaKnown RBP8.96□□□□□ -0.98
CNOT4-206ENST00000428680 ZNF652Q9Y2D9 606 aa8.96□□□□□ -0.98
CNOT4-206ENST00000428680 TMOD3Q9NYL9 352 aa8.96□□□□□ -0.98
CNOT4-206ENST00000428680 TRIM37O94972 964 aa8.95□□□□□ -0.98
CNOT4-206ENST00000428680 EN1Q05925 392 aaPredicted RBP8.95□□□□□ -0.98
CNOT4-206ENST00000428680 NBR1Q14596 966 aa8.95□□□□□ -0.98
CNOT4-206ENST00000428680 CCDC34Q96HJ3 373 aa8.95□□□□□ -0.98
CNOT4-206ENST00000428680 SYNE3Q6ZMZ3 975 aa8.95□□□□□ -0.98
CNOT4-206ENST00000428680 PIK3C2AO00443 1686 aa8.95□□□□□ -0.98
CNOT4-206ENST00000428680 SLC15A2Q16348 729 aa8.95□□□□□ -0.98
CNOT4-206ENST00000428680 AMOTQ4VCS5 1084 aa8.95□□□□□ -0.98
CNOT4-206ENST00000428680 USP47Q96K76 1375 aa8.95□□□□□ -0.98
CNOT4-206ENST00000428680 G3BP1Q13283 466 aaKnown RBP eCLIP8.94□□□□□ -0.98
CNOT4-206ENST00000428680 CABLES1Q8TDN4 633 aa8.94□□□□□ -0.98
CNOT4-206ENST00000428680 CD2APQ9Y5K6 639 aa8.94□□□□□ -0.98
CNOT4-206ENST00000428680 YY1P25490 414 aa8.94□□□□□ -0.98
CNOT4-206ENST00000428680 ERBB3P21860 1342 aa8.94□□□□□ -0.98
CNOT4-206ENST00000428680 INSRP06213 1382 aa8.94□□□□□ -0.98
CNOT4-206ENST00000428680 PTCD1O75127 700 aaKnown RBP8.94□□□□□ -0.98
CNOT4-206ENST00000428680 MPRIPQ6WCQ1 1025 aa8.94□□□□□ -0.98
CNOT4-206ENST00000428680 ZSCAN29Q8IWY8 852 aaPredicted RBP8.94□□□□□ -0.98
CNOT4-206ENST00000428680 CLUAP1Q96AJ1 413 aa8.94□□□□□ -0.98
CNOT4-206ENST00000428680 COL18A1P39060 1754 aa8.93□□□□□ -0.98
CNOT4-206ENST00000428680 FYB1O15117 783 aa8.93□□□□□ -0.98
CNOT4-206ENST00000428680 RGL2O15211 777 aa8.93□□□□□ -0.98
CNOT4-206ENST00000428680 R3HDM1Q15032 1099 aaKnown RBP8.93□□□□□ -0.98
CNOT4-206ENST00000428680 LARP1Q6PKG0 1096 aaKnown RBP8.93□□□□□ -0.98
CNOT4-206ENST00000428680 ANKRD24Q8TF21 1146 aa8.93□□□□□ -0.98
CNOT4-206ENST00000428680 GNL3LQ9NVN8 582 aaKnown RBP8.93□□□□□ -0.98
CNOT4-206ENST00000428680 ZC3H4Q9UPT8 1303 aaKnown RBP8.93□□□□□ -0.98
CNOT4-206ENST00000428680 ZCRB1Q8TBF4 217 aaKnown RBP8.93□□□□□ -0.98
CNOT4-206ENST00000428680 NEUROD6Q96NK8 337 aa8.93□□□□□ -0.98
CNOT4-206ENST00000428680 MPHOSPH8Q99549 860 aa8.93□□□□□ -0.98
CNOT4-206ENST00000428680 GPR162Q16538 588 aa8.92□□□□□ -0.98
CNOT4-206ENST00000428680 CD163L1Q9NR16 1453 aa8.92□□□□□ -0.98
CNOT4-206ENST00000428680 RIPK4P57078 832 aa8.92□□□□□ -0.98
CNOT4-206ENST00000428680 EZH2Q15910 746 aaKnown RBP8.92□□□□□ -0.98
CNOT4-206ENST00000428680 TXNRD1Q16881 649 aa8.92□□□□□ -0.98
CNOT4-206ENST00000428680 TFCP2L1Q9NZI6 479 aa8.92□□□□□ -0.98
CNOT4-206ENST00000428680 WWC1Q8IX03 1113 aa8.92□□□□□ -0.98
CNOT4-206ENST00000428680 ZNF622Q969S3 477 aaKnown RBP eCLIP8.92□□□□□ -0.982e-6■□□□□ 10.1
CNOT4-206ENST00000428680 R3HCC1Q9Y3T6 440 aaKnown RBP8.92□□□□□ -0.98
CNOT4-206ENST00000428680 A0A087WZG4 1122 aa8.92□□□□□ -0.98
CNOT4-206ENST00000428680 CASZ1Q86V15 1759 aa8.91□□□□□ -0.98
CNOT4-206ENST00000428680 CNNM1Q9NRU3 951 aa8.91□□□□□ -0.98
CNOT4-206ENST00000428680 ZNF831Q5JPB2 1677 aa8.91□□□□□ -0.98
CNOT4-206ENST00000428680 RFC4P35249 363 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms