RNA–Protein interactions for RNA: ENST00000400907.6

RERE-203, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 5 BASIC

Gene RERE, Length 2,973 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-203ENST00000400907 C22orf23Q9BZE7 217 aa9.91□□□□□ -0.82
RERE-203ENST00000400907 TOM1L2Q6ZVM7 507 aa9.9□□□□□ -0.82
RERE-203ENST00000400907 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.9□□□□□ -0.82
RERE-203ENST00000400907 TRIM44Q96DX7 344 aaPredicted RBP9.9□□□□□ -0.82
RERE-203ENST00000400907 BTG4Q9NY30 223 aa9.9□□□□□ -0.82
RERE-203ENST00000400907 CDK12Q9NYV4 1490 aaPredicted RBP9.9□□□□□ -0.82
RERE-203ENST00000400907 PDIA4P13667 645 aaKnown RBP9.9□□□□□ -0.83
RERE-203ENST00000400907 HSPA1LP34931 641 aa9.9□□□□□ -0.83
RERE-203ENST00000400907 CIZ1Q9ULV3 898 aaPredicted RBP9.9□□□□□ -0.83
RERE-203ENST00000400907 U3KPZ7 1027 aaPredicted RBP9.9□□□□□ -0.83
RERE-203ENST00000400907 KIAA1211Q6ZU35 1233 aa9.89□□□□□ -0.83
RERE-203ENST00000400907 WDR63Q8IWG1 891 aa9.89□□□□□ -0.83
RERE-203ENST00000400907 COL3A1P02461 1466 aaPredicted RBP9.89□□□□□ -0.83
RERE-203ENST00000400907 KIF1AQ12756 1690 aa9.89□□□□□ -0.83
RERE-203ENST00000400907 ITPRIPQ8IWB1 547 aa9.89□□□□□ -0.83
RERE-203ENST00000400907 CCDC9Q9Y3X0 531 aaKnown RBP9.89□□□□□ -0.83
RERE-203ENST00000400907 RARSP54136 660 aaKnown RBP9.88□□□□□ -0.83
RERE-203ENST00000400907 PDCL3Q9H2J4 239 aa9.88□□□□□ -0.83
RERE-203ENST00000400907 SMC4Q9NTJ3 1288 aa9.88□□□□□ -0.83
RERE-203ENST00000400907 ROBO1Q9Y6N7 1651 aa9.88□□□□□ -0.83
RERE-203ENST00000400907 DDX11L8A8MPP1 907 aa9.88□□□□□ -0.83
RERE-203ENST00000400907 GTPBP6O43824 516 aaPredicted RBP9.88□□□□□ -0.83
RERE-203ENST00000400907 IGSF3O75054 1194 aa9.88□□□□□ -0.83
RERE-203ENST00000400907 MTHFSDQ2M296 383 aaKnown RBP9.88□□□□□ -0.83
RERE-203ENST00000400907 MCM10Q7L590 875 aa9.88□□□□□ -0.83
RERE-203ENST00000400907 ERBB3P21860 1342 aa9.88□□□□□ -0.83
RERE-203ENST00000400907 LARP1Q6PKG0 1096 aaKnown RBP9.87□□□□□ -0.83
RERE-203ENST00000400907 TNPO1Q92973 898 aaKnown RBP9.87□□□□□ -0.83
RERE-203ENST00000400907 C8orf37Q96NL8 207 aa9.87□□□□□ -0.83
RERE-203ENST00000400907 MED1Q15648 1581 aaPredicted RBP9.87□□□□□ -0.83
RERE-203ENST00000400907 TPM2P07951 284 aa9.87□□□□□ -0.83
RERE-203ENST00000400907 RBM10P98175 930 aaKnown RBP9.87□□□□□ -0.83
RERE-203ENST00000400907 EXOSC9Q06265 439 aaKnown RBP9.87□□□□□ -0.83
RERE-203ENST00000400907 IGSF1Q8N6C5 1336 aa9.87□□□□□ -0.83
RERE-203ENST00000400907 DDIT3P35638 169 aa9.87□□□□□ -0.83
RERE-203ENST00000400907 NFE2L2Q16236 605 aa9.87□□□□□ -0.83
RERE-203ENST00000400907 TRIM35Q9UPQ4 493 aa9.87□□□□□ -0.83
RERE-203ENST00000400907 PEAK1Q9H792 1746 aa9.86□□□□□ -0.83
RERE-203ENST00000400907 RAPGEF4Q8WZA2 1011 aa9.86□□□□□ -0.83
RERE-203ENST00000400907 NGLY1Q96IV0 654 aa9.86□□□□□ -0.83
RERE-203ENST00000400907 AAMPQ13685 434 aa9.86□□□□□ -0.83
RERE-203ENST00000400907 HSCBQ8IWL3 235 aa9.86□□□□□ -0.83
RERE-203ENST00000400907 KCNV2Q8TDN2 545 aa9.86□□□□□ -0.83
RERE-203ENST00000400907 ZNF428Q96B54 188 aa9.86□□□□□ -0.83
RERE-203ENST00000400907 MIS18AQ9NYP9 233 aa9.86□□□□□ -0.83
RERE-203ENST00000400907 TRPM3Q9HCF6 1732 aaPredicted RBP9.85□□□□□ -0.83
RERE-203ENST00000400907 NFAT5O94916 1531 aa9.85□□□□□ -0.83
RERE-203ENST00000400907 CT47B1P0C2W7 299 aaPredicted RBP9.85□□□□□ -0.83
RERE-203ENST00000400907 RTF1Q92541 710 aaKnown RBP9.85□□□□□ -0.83
RERE-203ENST00000400907 RWDD1Q9H446 243 aaPredicted RBP9.85□□□□□ -0.83
RERE-203ENST00000400907 ISY1Q9ULR0 285 aaKnown RBP9.85□□□□□ -0.83
RERE-203ENST00000400907 MEX3CQ5U5Q3 659 aaKnown RBP9.84□□□□□ -0.83
RERE-203ENST00000400907 APBB1O00213 710 aa9.84□□□□□ -0.83
RERE-203ENST00000400907 ZNF530Q6P9A1 599 aaPredicted RBP9.84□□□□□ -0.83
RERE-203ENST00000400907 PRDM4Q9UKN5 801 aa9.84□□□□□ -0.83
RERE-203ENST00000400907 RTL1A6NKG5 1358 aa9.84□□□□□ -0.83
RERE-203ENST00000400907 A0A0G2JS52 829 aa9.84□□□□□ -0.83
RERE-203ENST00000400907 MPRIPQ6WCQ1 1025 aa9.84□□□□□ -0.83
RERE-203ENST00000400907 DDX54Q8TDD1 881 aaKnown RBP9.84□□□□□ -0.83
RERE-203ENST00000400907 GPBP1L1Q9HC44 474 aaPredicted RBP9.84□□□□□ -0.83
RERE-203ENST00000400907 KIF24Q5T7B8 1368 aa9.83□□□□□ -0.84
RERE-203ENST00000400907 IL16Q14005 1332 aa9.83□□□□□ -0.84
RERE-203ENST00000400907 TATP17735 454 aaPredicted RBP9.83□□□□□ -0.84
RERE-203ENST00000400907 ALS2Q96Q42 1657 aa9.83□□□□□ -0.84
RERE-203ENST00000400907 SLIT3O75094 1523 aa9.82□□□□□ -0.84
RERE-203ENST00000400907 CD2BP2O95400 341 aaKnown RBP9.82□□□□□ -0.84
RERE-203ENST00000400907 PLEKHO1Q53GL0 409 aaPredicted RBP9.82□□□□□ -0.84
RERE-203ENST00000400907 GAS2L2Q8NHY3 880 aa9.82□□□□□ -0.84
RERE-203ENST00000400907 C1orf141Q5JVX7 400 aa9.82□□□□□ -0.84
RERE-203ENST00000400907 SSH1Q8WYL5 1049 aa9.82□□□□□ -0.84
RERE-203ENST00000400907 LNPKQ9C0E8 428 aa9.82□□□□□ -0.84
RERE-203ENST00000400907 LGR6Q9HBX8 967 aa9.82□□□□□ -0.84
RERE-203ENST00000400907 NOB1Q9ULX3 412 aaKnown RBP9.82□□□□□ -0.84
RERE-203ENST00000400907 OFD1O75665 1012 aa9.81□□□□□ -0.84
RERE-203ENST00000400907 NASPP49321 788 aaPredicted RBP9.81□□□□□ -0.84
RERE-203ENST00000400907 MVPQ14764 893 aaKnown RBP9.81□□□□□ -0.84
RERE-203ENST00000400907 RAB3GAP1Q15042 981 aa9.81□□□□□ -0.84
RERE-203ENST00000400907 ZSCAN30Q86W11 494 aa9.81□□□□□ -0.84
RERE-203ENST00000400907 FAM13BQ9NYF5 915 aa9.81□□□□□ -0.84
RERE-203ENST00000400907 MARF1Q9Y4F3 1742 aaKnown RBP9.81□□□□□ -0.84
RERE-203ENST00000400907 CPDO75976 1380 aa9.81□□□□□ -0.84
RERE-203ENST00000400907 WDR17Q8IZU2 1322 aa9.81□□□□□ -0.84
RERE-203ENST00000400907 GNAT3A8MTJ3 354 aa9.81□□□□□ -0.84
RERE-203ENST00000400907 CALD1Q05682 793 aaKnown RBP9.81□□□□□ -0.84
RERE-203ENST00000400907 DZIP1LQ8IYY4 767 aaKnown RBP9.81□□□□□ -0.84
RERE-203ENST00000400907 PPP1R9BQ96SB3 815 aa9.81□□□□□ -0.84
RERE-203ENST00000400907 AK9Q5TCS8 1911 aa9.81□□□□□ -0.84
RERE-203ENST00000400907 SMC5Q8IY18 1101 aa9.81□□□□□ -0.84
RERE-203ENST00000400907 LTN1O94822 1766 aa9.8□□□□□ -0.84
RERE-203ENST00000400907 CAMTA1Q9Y6Y1 1673 aa9.8□□□□□ -0.84
RERE-203ENST00000400907 LMOD3Q0VAK6 560 aa9.8□□□□□ -0.84
RERE-203ENST00000400907 CCDC173Q0VFZ6 552 aa9.8□□□□□ -0.84
RERE-203ENST00000400907 ZKSCAN2Q63HK3 967 aa9.8□□□□□ -0.84
RERE-203ENST00000400907 HS6ST3Q8IZP7 471 aa9.8□□□□□ -0.84
RERE-203ENST00000400907 GBP4Q96PP9 640 aa9.8□□□□□ -0.84
RERE-203ENST00000400907 JCADQ9P266 1359 aa9.8□□□□□ -0.84
RERE-203ENST00000400907 HSP90AB1P08238 724 aaKnown RBP9.8□□□□□ -0.84
RERE-203ENST00000400907 KRT24Q2M2I5 525 aa9.8□□□□□ -0.84
RERE-203ENST00000400907 IL17REQ8NFR9 667 aa9.8□□□□□ -0.84
RERE-203ENST00000400907 R3HCC1Q9Y3T6 440 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms