RNA–Protein interactions for RNA: ENST00000400907.6

RERE-203, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 5 BASIC

Gene RERE, Length 2,973 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-203ENST00000400907 NISCHQ9Y2I1 1504 aa17.08■□□□□ 0.32
RERE-203ENST00000400907 CHIC1Q5VXU3 224 aa15.47■□□□□ 0.07
RERE-203ENST00000400907 AEBP2Q6ZN18 517 aaPredicted RBP15.13■□□□□ 0.01
RERE-203ENST00000400907 CCDC180Q9P1Z9 1646 aa14.77□□□□□ -0.05
RERE-203ENST00000400907 DCAF8L2P0C7V8 631 aa14.64□□□□□ -0.07
RERE-203ENST00000400907 ABCC9O60706 1549 aa14.49□□□□□ -0.09
RERE-203ENST00000400907 ZCCHC6Q5VYS8 1495 aaKnown RBP14.27□□□□□ -0.13
RERE-203ENST00000400907 SHROOM4Q9ULL8 1493 aa14.19□□□□□ -0.14
RERE-203ENST00000400907 PHF23Q9BUL5 403 aaPredicted RBP14.12□□□□□ -0.15
RERE-203ENST00000400907 DCAF1Q9Y4B6 1507 aa13.95□□□□□ -0.18
RERE-203ENST00000400907 EHMT2Q96KQ7 1210 aa13.91□□□□□ -0.18
RERE-203ENST00000400907 NACADO15069 1562 aa13.89□□□□□ -0.19
RERE-203ENST00000400907 RB1CC1Q8TDY2 1594 aa13.85□□□□□ -0.19
RERE-203ENST00000400907 MYO15BQ96JP2 1530 aa13.83□□□□□ -0.2
RERE-203ENST00000400907 SCRIBQ14160 1630 aa13.82□□□□□ -0.2
RERE-203ENST00000400907 PABPN1Q86U42 306 aaKnown RBP eCLIP13.77□□□□□ -0.21
RERE-203ENST00000400907 SUPT5HO00267 1087 aaKnown RBP13.62□□□□□ -0.23
RERE-203ENST00000400907 SLC24A1O60721 1099 aa13.49□□□□□ -0.25
RERE-203ENST00000400907 UNC13AQ9UPW8 1703 aa13.48□□□□□ -0.25
RERE-203ENST00000400907 BICRAQ9NZM4 1560 aa13.43□□□□□ -0.26
RERE-203ENST00000400907 CECR2Q9BXF3 1484 aa13.41□□□□□ -0.26
RERE-203ENST00000400907 PLPPR3Q6T4P5 718 aa13.29□□□□□ -0.28
RERE-203ENST00000400907 HRCP23327 699 aa13.29□□□□□ -0.28
RERE-203ENST00000400907 RSF1Q96T23 1441 aaPredicted RBP13.27□□□□□ -0.29
RERE-203ENST00000400907 MROH2BQ7Z745 1585 aa13.25□□□□□ -0.29
RERE-203ENST00000400907 BAZ1AQ9NRL2 1556 aaPredicted RBP13.17□□□□□ -0.3
RERE-203ENST00000400907 KCNA4P22459 653 aa13.14□□□□□ -0.31
RERE-203ENST00000400907 SMARCA4P51532 1647 aa13.12□□□□□ -0.31
RERE-203ENST00000400907 WIZO95785 1651 aa13.11□□□□□ -0.31
RERE-203ENST00000400907 PPARGC1BQ86YN6 1023 aaKnown RBP13.1□□□□□ -0.31
RERE-203ENST00000400907 EIF4G1Q04637 1599 aaKnown RBP13.09□□□□□ -0.31
RERE-203ENST00000400907 PCGF6Q9BYE7 350 aa13.05□□□□□ -0.32
RERE-203ENST00000400907 ATAD2BQ9ULI0 1458 aa13.03□□□□□ -0.32
RERE-203ENST00000400907 DNAJC5BQ9UF47 199 aa13.01□□□□□ -0.33
RERE-203ENST00000400907 CSRNP3Q8WYN3 585 aa12.98□□□□□ -0.33
RERE-203ENST00000400907 BAZ1BQ9UIG0 1483 aaKnown RBP12.97□□□□□ -0.33
RERE-203ENST00000400907 CC2D2AQ9P2K1 1620 aa12.95□□□□□ -0.34
RERE-203ENST00000400907 SMARCA2P51531 1590 aa12.93□□□□□ -0.34
RERE-203ENST00000400907 RTN4Q9NQC3 1192 aaKnown RBP12.91□□□□□ -0.34
RERE-203ENST00000400907 TOP2AP11388 1531 aaKnown RBP12.89□□□□□ -0.35
RERE-203ENST00000400907 NCAPD3P42695 1498 aa12.89□□□□□ -0.35
RERE-203ENST00000400907 CCDC88BA6NC98 1476 aa12.87□□□□□ -0.35
RERE-203ENST00000400907 PEG3Q9GZU2 1588 aa12.86□□□□□ -0.35
RERE-203ENST00000400907 LOC105371045A0A1W2PR82 267 aa12.81□□□□□ -0.36
RERE-203ENST00000400907 ADRA2BP18089 450 aa12.78□□□□□ -0.36
RERE-203ENST00000400907 HMGXB3Q12766 1538 aa12.77□□□□□ -0.36
RERE-203ENST00000400907 TRIM41Q8WV44 630 aa12.72□□□□□ -0.37
RERE-203ENST00000400907 PELP1Q8IZL8 1130 aaKnown RBP12.71□□□□□ -0.37
RERE-203ENST00000400907 FAM9AQ8IZU1 332 aaPredicted RBP12.68□□□□□ -0.38
RERE-203ENST00000400907 NESP48681 1621 aa12.64□□□□□ -0.39
RERE-203ENST00000400907 CADPSQ9ULU8 1353 aa12.64□□□□□ -0.39
RERE-203ENST00000400907 SCAF1Q9H7N4 1312 aaKnown RBP12.62□□□□□ -0.39
RERE-203ENST00000400907 ABCC8Q09428 1581 aa12.6□□□□□ -0.39
RERE-203ENST00000400907 CFTRP13569 1480 aa12.58□□□□□ -0.4
RERE-203ENST00000400907 TRIM26Q12899 539 aaPredicted RBP12.57□□□□□ -0.4
RERE-203ENST00000400907 WRNQ14191 1432 aaPredicted RBP eCLIP12.52□□□□□ -0.41
RERE-203ENST00000400907 FANCD2Q9BXW9 1451 aa12.49□□□□□ -0.41
RERE-203ENST00000400907 PDS5BQ9NTI5 1447 aa12.46□□□□□ -0.41
RERE-203ENST00000400907 SLC4A1APQ9BWU0 796 aaKnown RBP12.44□□□□□ -0.42
RERE-203ENST00000400907 ERCC6Q03468 1493 aa12.43□□□□□ -0.42
RERE-203ENST00000400907 LAMC3Q9Y6N6 1575 aa12.42□□□□□ -0.42
RERE-203ENST00000400907 PRDM2Q13029 1718 aa12.41□□□□□ -0.42
RERE-203ENST00000400907 CEP164Q9UPV0 1460 aa12.41□□□□□ -0.42
RERE-203ENST00000400907 ZEB1P37275 1124 aaPredicted RBP12.4□□□□□ -0.42
RERE-203ENST00000400907 SYNJ1O43426 1573 aa12.4□□□□□ -0.42
RERE-203ENST00000400907 TTBK1Q5TCY1 1321 aaPredicted RBP12.39□□□□□ -0.43
RERE-203ENST00000400907 SOGA1O94964 1423 aa12.38□□□□□ -0.43
RERE-203ENST00000400907 CUX1P39880 1505 aa12.37□□□□□ -0.43
RERE-203ENST00000400907 RUSC2Q8N2Y8 1516 aa12.34□□□□□ -0.43
RERE-203ENST00000400907 URB2Q14146 1524 aaKnown RBP12.32□□□□□ -0.44
RERE-203ENST00000400907 KIF21AQ7Z4S6 1674 aa12.32□□□□□ -0.44
RERE-203ENST00000400907 TOPBP1Q92547 1522 aa12.3□□□□□ -0.44
RERE-203ENST00000400907 FGD5Q6ZNL6 1462 aa12.3□□□□□ -0.44
RERE-203ENST00000400907 RAD54L2Q9Y4B4 1467 aa12.3□□□□□ -0.44
RERE-203ENST00000400907 TOP2BQ02880 1626 aa12.29□□□□□ -0.44
RERE-203ENST00000400907 RANGAP1P46060 587 aaPredicted RBP12.27□□□□□ -0.45
RERE-203ENST00000400907 ZBTB22O15209 634 aa12.27□□□□□ -0.45
RERE-203ENST00000400907 NEUROD1Q13562 356 aa12.27□□□□□ -0.45
RERE-203ENST00000400907 AMER1Q5JTC6 1135 aaPredicted RBP12.27□□□□□ -0.45
RERE-203ENST00000400907 TDRD9Q8NDG6 1382 aaKnown RBP12.26□□□□□ -0.45
RERE-203ENST00000400907 MRC2Q9UBG0 1479 aa12.26□□□□□ -0.45
RERE-203ENST00000400907 ACIN1Q9UKV3 1341 aaKnown RBP12.26□□□□□ -0.45
RERE-203ENST00000400907 POLA1P09884 1462 aaPredicted RBP12.25□□□□□ -0.45
RERE-203ENST00000400907 UBTFP17480 764 aaKnown RBP12.25□□□□□ -0.45
RERE-203ENST00000400907 CUX2O14529 1486 aa12.25□□□□□ -0.45
RERE-203ENST00000400907 DNMBPQ6XZF7 1577 aa12.24□□□□□ -0.45
RERE-203ENST00000400907 PPP6R1Q9UPN7 881 aa12.23□□□□□ -0.45
RERE-203ENST00000400907 BIVM-ERCC5R4GMW8 1640 aa12.22□□□□□ -0.45
RERE-203ENST00000400907 KIF27Q86VH2 1401 aa12.21□□□□□ -0.46
RERE-203ENST00000400907 PRKCSHP14314 528 aaPredicted RBP12.19□□□□□ -0.46
RERE-203ENST00000400907 GTF3C3Q9Y5Q9 886 aa12.18□□□□□ -0.46
RERE-203ENST00000400907 EEA1Q15075 1411 aa12.18□□□□□ -0.46
RERE-203ENST00000400907 AQRO60306 1485 aaKnown RBP eCLIP12.17□□□□□ -0.464e-7■■■■■ 26.9
RERE-203ENST00000400907 MYT1Q01538 1121 aa12.17□□□□□ -0.46
RERE-203ENST00000400907 FBLN2P98095 1184 aa12.15□□□□□ -0.46
RERE-203ENST00000400907 IGF1RP08069 1367 aa12.14□□□□□ -0.47
RERE-203ENST00000400907 ZNF608Q9ULD9 1512 aaPredicted RBP12.13□□□□□ -0.47
RERE-203ENST00000400907 WDR62O43379 1518 aa12.13□□□□□ -0.47
RERE-203ENST00000400907 THOC2Q8NI27 1593 aaKnown RBP12.11□□□□□ -0.47
RERE-203ENST00000400907 ABCA10Q8WWZ4 1543 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms