RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 PPP1R42Q7Z4L9 355 aa15.4■□□□□ 0.06
PPP4R1-202ENST00000400555 PTMSP20962 102 aa15.4■□□□□ 0.06
PPP4R1-202ENST00000400555 PSME1Q06323 249 aa15.4■□□□□ 0.06
PPP4R1-202ENST00000400555 MYO5BQ9ULV0 1848 aa15.39■□□□□ 0.05
PPP4R1-202ENST00000400555 ESCO1Q5FWF5 840 aa15.39■□□□□ 0.05
PPP4R1-202ENST00000400555 SIL1Q9H173 461 aa15.39■□□□□ 0.05
PPP4R1-202ENST00000400555 A2ML1A8K2U0 1454 aa15.39■□□□□ 0.05
PPP4R1-202ENST00000400555 KLHL40Q2TBA0 621 aa15.39■□□□□ 0.05
PPP4R1-202ENST00000400555 LRRC59Q96AG4 307 aaKnown RBP15.39■□□□□ 0.05
PPP4R1-202ENST00000400555 TNRQ92752 1358 aa15.39■□□□□ 0.05
PPP4R1-202ENST00000400555 PTCH1Q13635 1447 aa15.39■□□□□ 0.05
PPP4R1-202ENST00000400555 PI4KAP2A4QPH2 592 aa15.38■□□□□ 0.05
PPP4R1-202ENST00000400555 PI4KAP1Q8N8J0 262 aa15.38■□□□□ 0.05
PPP4R1-202ENST00000400555 JARID2Q92833 1246 aaPredicted RBP15.38■□□□□ 0.05
PPP4R1-202ENST00000400555 ESYT1Q9BSJ8 1104 aa15.38■□□□□ 0.05
PPP4R1-202ENST00000400555 SRCIN1Q9C0H9 1055 aa15.38■□□□□ 0.05
PPP4R1-202ENST00000400555 AK9Q5TCS8 1911 aa15.38■□□□□ 0.05
PPP4R1-202ENST00000400555 KCNQ3O43525 872 aa15.38■□□□□ 0.05
PPP4R1-202ENST00000400555 NSFL1CQ9UNZ2 370 aaKnown RBP15.38■□□□□ 0.05
PPP4R1-202ENST00000400555 PIK3R4Q99570 1358 aa15.38■□□□□ 0.05
PPP4R1-202ENST00000400555 RBM10P98175 930 aaKnown RBP15.38■□□□□ 0.05
PPP4R1-202ENST00000400555 LGR6Q9HBX8 967 aa15.38■□□□□ 0.05
PPP4R1-202ENST00000400555 IL17REQ8NFR9 667 aa15.37■□□□□ 0.05
PPP4R1-202ENST00000400555 RBSNQ9H1K0 784 aa15.37■□□□□ 0.05
PPP4R1-202ENST00000400555 HSP90AA2PQ14568 343 aaPredicted RBP15.37■□□□□ 0.05
PPP4R1-202ENST00000400555 DIAPH3Q9NSV4 1193 aa15.37■□□□□ 0.05
PPP4R1-202ENST00000400555 R3HCC1Q9Y3T6 440 aaKnown RBP15.37■□□□□ 0.05
PPP4R1-202ENST00000400555 ADGRB2O60241 1585 aa15.37■□□□□ 0.05
PPP4R1-202ENST00000400555 MAP2P11137 1827 aaKnown RBP15.37■□□□□ 0.05
PPP4R1-202ENST00000400555 FIBPO43427 364 aa15.37■□□□□ 0.05
PPP4R1-202ENST00000400555 CLCN1P35523 988 aa15.37■□□□□ 0.05
PPP4R1-202ENST00000400555 CHPF2Q9P2E5 772 aa15.37■□□□□ 0.05
PPP4R1-202ENST00000400555 ZNF530Q6P9A1 599 aaPredicted RBP15.36■□□□□ 0.05
PPP4R1-202ENST00000400555 LMBRD1Q9NUN5 540 aa15.36■□□□□ 0.05
PPP4R1-202ENST00000400555 NEURL4Q96JN8 1562 aa15.36■□□□□ 0.05
PPP4R1-202ENST00000400555 VPS37CA5D8V6 355 aaPredicted RBP15.36■□□□□ 0.05
PPP4R1-202ENST00000400555 NBPF7P0C2Y1 421 aaPredicted RBP15.36■□□□□ 0.05
PPP4R1-202ENST00000400555 CWC22Q9HCG8 908 aaKnown RBP15.36■□□□□ 0.05
PPP4R1-202ENST00000400555 NAP1L2Q9ULW6 460 aaPredicted RBP15.36■□□□□ 0.05
PPP4R1-202ENST00000400555 PA2G4Q9UQ80 394 aaKnown RBP15.36■□□□□ 0.05
PPP4R1-202ENST00000400555 KCNA6P17658 529 aa15.35■□□□□ 0.05
PPP4R1-202ENST00000400555 CHMLP26374 656 aa15.35■□□□□ 0.05
PPP4R1-202ENST00000400555 DDIT3P35638 169 aa15.35■□□□□ 0.05
PPP4R1-202ENST00000400555 ATP7BP35670 1465 aa15.35■□□□□ 0.05
PPP4R1-202ENST00000400555 ATP8B2P98198 1209 aa15.35■□□□□ 0.05
PPP4R1-202ENST00000400555 PIP4K2AP48426 406 aaPredicted RBP15.34■□□□□ 0.05
PPP4R1-202ENST00000400555 CCDC173Q0VFZ6 552 aa15.34■□□□□ 0.05
PPP4R1-202ENST00000400555 TCEANC2Q96MN5 208 aa15.34■□□□□ 0.05
PPP4R1-202ENST00000400555 GPT2Q8TD30 523 aa15.34■□□□□ 0.05
PPP4R1-202ENST00000400555 USP44Q9H0E7 712 aa15.34■□□□□ 0.05
PPP4R1-202ENST00000400555 CPSF1Q10570 1443 aaKnown RBP15.34■□□□□ 0.05
PPP4R1-202ENST00000400555 AATKQ6ZMQ8 1374 aa15.33■□□□□ 0.05
PPP4R1-202ENST00000400555 IFIT2P09913 472 aaKnown RBP15.33■□□□□ 0.05
PPP4R1-202ENST00000400555 MED14O60244 1454 aa15.33■□□□□ 0.04
PPP4R1-202ENST00000400555 MYL6BP14649 208 aa15.33■□□□□ 0.04
PPP4R1-202ENST00000400555 FOSBP53539 338 aa15.33■□□□□ 0.04
PPP4R1-202ENST00000400555 BTBD11A6QL63 1104 aa15.33■□□□□ 0.04
PPP4R1-202ENST00000400555 HOXC9P31274 260 aa15.33■□□□□ 0.04
PPP4R1-202ENST00000400555 CFAP74Q9C0B2 1584 aa15.33■□□□□ 0.04
PPP4R1-202ENST00000400555 TMEM63CQ9P1W3 806 aa15.33■□□□□ 0.04
PPP4R1-202ENST00000400555 SETD1BQ9UPS6 1966 aaKnown RBP15.32■□□□□ 0.04
PPP4R1-202ENST00000400555 FAM13BQ9NYF5 915 aa15.32■□□□□ 0.04
PPP4R1-202ENST00000400555 C1orf141Q5JVX7 400 aa15.32■□□□□ 0.04
PPP4R1-202ENST00000400555 FERMT3Q86UX7 667 aa15.32■□□□□ 0.04
PPP4R1-202ENST00000400555 TMEM131LA2VDJ0 1609 aa15.32■□□□□ 0.04
PPP4R1-202ENST00000400555 RHPN1Q8TCX5 695 aa15.32■□□□□ 0.04
PPP4R1-202ENST00000400555 CCDC8Q9H0W5 538 aaPredicted RBP15.32■□□□□ 0.04
PPP4R1-202ENST00000400555 ZDHHC9Q9Y397 364 aa15.32■□□□□ 0.04
PPP4R1-202ENST00000400555 CDK12Q9NYV4 1490 aaPredicted RBP15.32■□□□□ 0.04
PPP4R1-202ENST00000400555 PLEKHG3A1L390 1219 aa15.31■□□□□ 0.04
PPP4R1-202ENST00000400555 CWF19L2Q2TBE0 894 aaKnown RBP15.31■□□□□ 0.04
PPP4R1-202ENST00000400555 SMC3Q9UQE7 1217 aa15.31■□□□□ 0.04
PPP4R1-202ENST00000400555 ZNF330Q9Y3S2 320 aaPredicted RBP15.31■□□□□ 0.04
PPP4R1-202ENST00000400555 GADD45BO75293 160 aaPredicted RBP15.31■□□□□ 0.04
PPP4R1-202ENST00000400555 CASTP20810 708 aaKnown RBP15.31■□□□□ 0.04
PPP4R1-202ENST00000400555 PPP6R1Q9UPN7 881 aa15.31■□□□□ 0.04
PPP4R1-202ENST00000400555 FLT4P35916 1363 aa15.31■□□□□ 0.04
PPP4R1-202ENST00000400555 TMEM2Q9UHN6 1383 aa15.31■□□□□ 0.04
PPP4R1-202ENST00000400555 ZC3H6P61129 1189 aaKnown RBP15.31■□□□□ 0.04
PPP4R1-202ENST00000400555 CCDC83Q8IWF9 413 aa15.31■□□□□ 0.04
PPP4R1-202ENST00000400555 ZNF830Q96NB3 372 aaPredicted RBP15.31■□□□□ 0.04
PPP4R1-202ENST00000400555 IL25Q9H293 177 aa15.31■□□□□ 0.04
PPP4R1-202ENST00000400555 PRPF40BQ6NWY9 871 aaKnown RBP15.3■□□□□ 0.04
PPP4R1-202ENST00000400555 BCL11BQ9C0K0 894 aaPredicted RBP15.3■□□□□ 0.04
PPP4R1-202ENST00000400555 PPFIA3O75145 1194 aa15.3■□□□□ 0.04
PPP4R1-202ENST00000400555 FGD1P98174 961 aa15.3■□□□□ 0.04
PPP4R1-202ENST00000400555 STK3Q13188 491 aa15.3■□□□□ 0.04
PPP4R1-202ENST00000400555 CLASRPQ8N2M8 674 aaKnown RBP15.3■□□□□ 0.04
PPP4R1-202ENST00000400555 CSB-PGBD3P0DP91 1061 aa15.3■□□□□ 0.04
PPP4R1-202ENST00000400555 ZSCAN30Q86W11 494 aa15.3■□□□□ 0.04
PPP4R1-202ENST00000400555 JAKMIP1Q96N16 626 aaKnown RBP15.3■□□□□ 0.04
PPP4R1-202ENST00000400555 AACSQ86V21 672 aa15.29■□□□□ 0.04
PPP4R1-202ENST00000400555 VSIG10Q8N0Z9 540 aa15.29■□□□□ 0.04
PPP4R1-202ENST00000400555 CNTROBQ8N137 903 aa15.29■□□□□ 0.04
PPP4R1-202ENST00000400555 DNAAF4Q8WXU2 420 aa15.29■□□□□ 0.04
PPP4R1-202ENST00000400555 ISY1Q9ULR0 285 aaKnown RBP15.29■□□□□ 0.04
PPP4R1-202ENST00000400555 ATP10DQ9P241 1426 aa15.29■□□□□ 0.04
PPP4R1-202ENST00000400555 NBPF6Q5VWK0 638 aa15.29■□□□□ 0.04
PPP4R1-202ENST00000400555 NECAB1Q8N987 351 aa15.29■□□□□ 0.04
PPP4R1-202ENST00000400555 NBPF4Q96M43 638 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms