RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 MAMSTRQ6ZN01 415 aa8.08□□□□□ -1.12
TM9SF4-202ENST00000398022 ITFG2Q969R8 447 aa8.08□□□□□ -1.12
TM9SF4-202ENST00000398022 METTL14Q9HCE5 456 aaKnown RBP8.08□□□□□ -1.12
TM9SF4-202ENST00000398022 PPP4R3CPQ6ZMV5 832 aa8.08□□□□□ -1.12
TM9SF4-202ENST00000398022 ZNF662Q6ZS27 426 aa8.08□□□□□ -1.12
TM9SF4-202ENST00000398022 CENPQQ7L2Z9 268 aaPredicted RBP8.08□□□□□ -1.12
TM9SF4-202ENST00000398022 BLMP54132 1417 aaPredicted RBP8.08□□□□□ -1.12
TM9SF4-202ENST00000398022 ASXL1Q8IXJ9 1541 aa8.08□□□□□ -1.12
TM9SF4-202ENST00000398022 CDK12Q9NYV4 1490 aaPredicted RBP8.07□□□□□ -1.12
TM9SF4-202ENST00000398022 KIF3BO15066 747 aa8.07□□□□□ -1.12
TM9SF4-202ENST00000398022 GTPBP4Q9BZE4 634 aaKnown RBP8.07□□□□□ -1.12
TM9SF4-202ENST00000398022 CEP83Q9Y592 693 aa8.07□□□□□ -1.12
TM9SF4-202ENST00000398022 TRPM1Q7Z4N2 1603 aa8.07□□□□□ -1.12
TM9SF4-202ENST00000398022 PLIN1O60240 522 aa8.07□□□□□ -1.12
TM9SF4-202ENST00000398022 PUS10Q3MIT2 529 aaKnown RBP8.07□□□□□ -1.12
TM9SF4-202ENST00000398022 PLEKHG1Q9ULL1 1385 aa8.07□□□□□ -1.12
TM9SF4-202ENST00000398022 UTRNP46939 3433 aa8.07□□□□□ -1.12
TM9SF4-202ENST00000398022 CT47B1P0C2W7 299 aaPredicted RBP8.07□□□□□ -1.12
TM9SF4-202ENST00000398022 CCDC85AQ96PX6 553 aaPredicted RBP8.07□□□□□ -1.12
TM9SF4-202ENST00000398022 UVSSAQ2YD98 709 aa8.06□□□□□ -1.12
TM9SF4-202ENST00000398022 SMC5Q8IY18 1101 aa8.06□□□□□ -1.12
TM9SF4-202ENST00000398022 BRWD3Q6RI45 1802 aa8.06□□□□□ -1.12
TM9SF4-202ENST00000398022 GOLGA2Q08379 1002 aa8.06□□□□□ -1.12
TM9SF4-202ENST00000398022 FAM210AQ96ND0 272 aa8.06□□□□□ -1.12
TM9SF4-202ENST00000398022 ARHGEF10LQ9HCE6 1279 aa8.06□□□□□ -1.12
TM9SF4-202ENST00000398022 TESK2Q96S53 571 aa8.06□□□□□ -1.12
TM9SF4-202ENST00000398022 KCNA1Q09470 495 aa8.05□□□□□ -1.12
TM9SF4-202ENST00000398022 MTERF4Q7Z6M4 381 aaKnown RBP8.05□□□□□ -1.12
TM9SF4-202ENST00000398022 ANKLE2Q86XL3 938 aa8.05□□□□□ -1.12
TM9SF4-202ENST00000398022 RPAINQ86UA6 219 aa8.05□□□□□ -1.12
TM9SF4-202ENST00000398022 TMX4Q9H1E5 349 aaPredicted RBP8.05□□□□□ -1.12
TM9SF4-202ENST00000398022 ANAPC4Q9UJX5 808 aa8.05□□□□□ -1.12
TM9SF4-202ENST00000398022 KIF1BO60333 1816 aa8.05□□□□□ -1.12
TM9SF4-202ENST00000398022 NRAPQ86VF7 1730 aa8.05□□□□□ -1.12
TM9SF4-202ENST00000398022 ECM2O94769 699 aaPredicted RBP8.04□□□□□ -1.12
TM9SF4-202ENST00000398022 GSE1Q14687 1217 aa8.04□□□□□ -1.12
TM9SF4-202ENST00000398022 FAM161AQ3B820 660 aa8.04□□□□□ -1.12
TM9SF4-202ENST00000398022 POTEAQ6S8J7 498 aa8.04□□□□□ -1.12
TM9SF4-202ENST00000398022 DRC1Q96MC2 740 aa8.04□□□□□ -1.12
TM9SF4-202ENST00000398022 CCDC94Q9BW85 323 aaPredicted RBP8.04□□□□□ -1.12
TM9SF4-202ENST00000398022 EIF3AQ14152 1382 aaKnown RBP8.04□□□□□ -1.12
TM9SF4-202ENST00000398022 STK10O94804 968 aaKnown RBP8.04□□□□□ -1.12
TM9SF4-202ENST00000398022 NEXNQ0ZGT2 675 aa8.04□□□□□ -1.12
TM9SF4-202ENST00000398022 THEMISQ8N1K5 641 aaPredicted RBP8.04□□□□□ -1.12
TM9SF4-202ENST00000398022 BORCS6Q96GS4 357 aa8.04□□□□□ -1.12
TM9SF4-202ENST00000398022 ADAMTS8Q9UP79 889 aa8.04□□□□□ -1.12
TM9SF4-202ENST00000398022 SMC3Q9UQE7 1217 aa8.04□□□□□ -1.12
TM9SF4-202ENST00000398022 TMEM94Q12767 1356 aa8.04□□□□□ -1.12
TM9SF4-202ENST00000398022 MPHOSPH10O00566 681 aaKnown RBP8.04□□□□□ -1.12
TM9SF4-202ENST00000398022 HDGFL1Q5TGJ6 251 aa8.04□□□□□ -1.12
TM9SF4-202ENST00000398022 EP400NLQ6ZTU2 488 aa8.04□□□□□ -1.12
TM9SF4-202ENST00000398022 CHMP4CQ96CF2 233 aa8.04□□□□□ -1.12
TM9SF4-202ENST00000398022 MAF1Q9H063 256 aa8.04□□□□□ -1.12
TM9SF4-202ENST00000398022 VASPP50552 380 aaPredicted RBP8.03□□□□□ -1.12
TM9SF4-202ENST00000398022 KCNV2Q8TDN2 545 aa8.03□□□□□ -1.12
TM9SF4-202ENST00000398022 PIK3R5Q8WYR1 880 aa8.03□□□□□ -1.12
TM9SF4-202ENST00000398022 RGPD8O14715 1765 aaPredicted RBP8.03□□□□□ -1.12
TM9SF4-202ENST00000398022 DCCP43146 1447 aa8.03□□□□□ -1.12
TM9SF4-202ENST00000398022 TDO2P48775 406 aa8.03□□□□□ -1.12
TM9SF4-202ENST00000398022 NBPF3Q9H094 633 aa8.03□□□□□ -1.12
TM9SF4-202ENST00000398022 PPP2R1AP30153 589 aa8.03□□□□□ -1.12
TM9SF4-202ENST00000398022 CLCN1P35523 988 aa8.03□□□□□ -1.12
TM9SF4-202ENST00000398022 ZC3H15Q8WU90 426 aaKnown RBP8.03□□□□□ -1.12
TM9SF4-202ENST00000398022 CALR3Q96L12 384 aaKnown RBP8.03□□□□□ -1.12
TM9SF4-202ENST00000398022 USP32Q8NFA0 1604 aa8.03□□□□□ -1.12
TM9SF4-202ENST00000398022 APLP1P51693 650 aa8.03□□□□□ -1.12
TM9SF4-202ENST00000398022 MST1RQ04912 1400 aa8.02□□□□□ -1.12
TM9SF4-202ENST00000398022 TRPM3Q9HCF6 1732 aaPredicted RBP8.02□□□□□ -1.13
TM9SF4-202ENST00000398022 FMN2Q9NZ56 1722 aa8.02□□□□□ -1.13
TM9SF4-202ENST00000398022 SNRNP27Q8WVK2 155 aaKnown RBP8.02□□□□□ -1.13
TM9SF4-202ENST00000398022 KDM4CQ9H3R0 1056 aa8.02□□□□□ -1.13
TM9SF4-202ENST00000398022 SYNPO2Q9UMS6 1093 aa8.02□□□□□ -1.13
TM9SF4-202ENST00000398022 PPP1R1BQ9UD71 204 aaPredicted RBP8.02□□□□□ -1.13
TM9SF4-202ENST00000398022 TRAK2O60296 914 aa8.02□□□□□ -1.13
TM9SF4-202ENST00000398022 TOM1O60784 492 aa8.02□□□□□ -1.13
TM9SF4-202ENST00000398022 COPB2P35606 906 aa8.02□□□□□ -1.13
TM9SF4-202ENST00000398022 SPOCK3Q9BQ16 436 aa8.02□□□□□ -1.13
TM9SF4-202ENST00000398022 SUDS3Q9H7L9 328 aaPredicted RBP8.01□□□□□ -1.13
TM9SF4-202ENST00000398022 PLCH1Q4KWH8 1693 aa8.01□□□□□ -1.13
TM9SF4-202ENST00000398022 IDI1Q13907 227 aa8.01□□□□□ -1.13
TM9SF4-202ENST00000398022 DUSP27Q5VZP5 1158 aa8.01□□□□□ -1.13
TM9SF4-202ENST00000398022 MYCBPQ99417 103 aaPredicted RBP8.01□□□□□ -1.13
TM9SF4-202ENST00000398022 TSPYL1Q9H0U9 437 aa8.01□□□□□ -1.13
TM9SF4-202ENST00000398022 FAM13BQ9NYF5 915 aa8.01□□□□□ -1.13
TM9SF4-202ENST00000398022 CCDC172P0C7W6 258 aa8.01□□□□□ -1.13
TM9SF4-202ENST00000398022 KLHL42Q9P2K6 505 aa8.01□□□□□ -1.13
TM9SF4-202ENST00000398022 KDM2BQ8NHM5 1336 aa8□□□□□ -1.13
TM9SF4-202ENST00000398022 PMM1Q92871 262 aa8□□□□□ -1.13
TM9SF4-202ENST00000398022 CLUAP1Q96AJ1 413 aa8□□□□□ -1.13
TM9SF4-202ENST00000398022 JADE2Q9NQC1 790 aa8□□□□□ -1.13
TM9SF4-202ENST00000398022 TPX2Q9ULW0 747 aaKnown RBP8□□□□□ -1.13
TM9SF4-202ENST00000398022 COMMD10Q9Y6G5 202 aa8□□□□□ -1.13
TM9SF4-202ENST00000398022 LRP5O75197 1615 aa8□□□□□ -1.13
TM9SF4-202ENST00000398022 FAM200BP0CF97 657 aa8□□□□□ -1.13
TM9SF4-202ENST00000398022 NFKBIBQ15653 356 aa8□□□□□ -1.13
TM9SF4-202ENST00000398022 VTI1AQ96AJ9 217 aa8□□□□□ -1.13
TM9SF4-202ENST00000398022 RRAGDQ9NQL2 400 aaPredicted RBP8□□□□□ -1.13
TM9SF4-202ENST00000398022 TNS1Q9HBL0 1735 aaKnown RBP7.99□□□□□ -1.13
TM9SF4-202ENST00000398022 WDHD1O75717 1129 aaPredicted RBP7.99□□□□□ -1.13
TM9SF4-202ENST00000398022 KCNA6P17658 529 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms