RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 SDSP20132 328 aa16.01■□□□□ 0.15
NFKB1-202ENST00000394820 CEBPZQ03701 1054 aaKnown RBP16.01■□□□□ 0.15
NFKB1-202ENST00000394820 RAB3GAP1Q15042 981 aa16.01■□□□□ 0.15
NFKB1-202ENST00000394820 EYA1Q99502 592 aa16.01■□□□□ 0.15
NFKB1-202ENST00000394820 RICTORQ6R327 1708 aa16.01■□□□□ 0.15
NFKB1-202ENST00000394820 SURF6O75683 361 aaKnown RBP16■□□□□ 0.15
NFKB1-202ENST00000394820 PSME1Q06323 249 aa16■□□□□ 0.15
NFKB1-202ENST00000394820 THEMISQ8N1K5 641 aaPredicted RBP16■□□□□ 0.15
NFKB1-202ENST00000394820 TTC12Q9H892 705 aaPredicted RBP16■□□□□ 0.15
NFKB1-202ENST00000394820 CIZ1Q9ULV3 898 aaPredicted RBP16■□□□□ 0.15
NFKB1-202ENST00000394820 FAM135BQ49AJ0 1406 aa16■□□□□ 0.15
NFKB1-202ENST00000394820 SPDYE4A6NLX3 237 aa16■□□□□ 0.15
NFKB1-202ENST00000394820 ANXA1P04083 346 aa16■□□□□ 0.15
NFKB1-202ENST00000394820 CPS1P31327 1500 aa16■□□□□ 0.15
NFKB1-202ENST00000394820 TSPY26PQ9H489 355 aa15.99■□□□□ 0.15
NFKB1-202ENST00000394820 A0A0G2JS52 829 aa15.99■□□□□ 0.15
NFKB1-202ENST00000394820 ERC2O15083 957 aa15.99■□□□□ 0.15
NFKB1-202ENST00000394820 CAMK4Q16566 473 aa15.99■□□□□ 0.15
NFKB1-202ENST00000394820 KDM4AO75164 1064 aa15.99■□□□□ 0.15
NFKB1-202ENST00000394820 JARID2Q92833 1246 aaPredicted RBP15.99■□□□□ 0.15
NFKB1-202ENST00000394820 COL3A1P02461 1466 aaPredicted RBP15.98■□□□□ 0.15
NFKB1-202ENST00000394820 NLRP1Q9C000 1473 aa15.98■□□□□ 0.15
NFKB1-202ENST00000394820 HAP1P54257 671 aaPredicted RBP15.98■□□□□ 0.15
NFKB1-202ENST00000394820 STK3Q13188 491 aa15.98■□□□□ 0.15
NFKB1-202ENST00000394820 KLHL40Q2TBA0 621 aa15.98■□□□□ 0.15
NFKB1-202ENST00000394820 SMC3Q9UQE7 1217 aa15.98■□□□□ 0.15
NFKB1-202ENST00000394820 ZRSR1Q15695 479 aaKnown RBP15.97■□□□□ 0.15
NFKB1-202ENST00000394820 ZBTB9Q96C00 473 aa15.97■□□□□ 0.15
NFKB1-202ENST00000394820 FSD2A1L4K1 749 aa15.97■□□□□ 0.15
NFKB1-202ENST00000394820 ZNF853P0CG23 659 aa15.97■□□□□ 0.15
NFKB1-202ENST00000394820 HCLS1P14317 486 aaPredicted RBP15.96■□□□□ 0.15
NFKB1-202ENST00000394820 CWC27Q6UX04 472 aaKnown RBP15.96■□□□□ 0.15
NFKB1-202ENST00000394820 CCDC39Q9UFE4 941 aa15.96■□□□□ 0.15
NFKB1-202ENST00000394820 RIMBP3CA6NJZ7 1639 aa15.96■□□□□ 0.15
NFKB1-202ENST00000394820 RIMBP3BA6NNM3 1639 aa15.96■□□□□ 0.15
NFKB1-202ENST00000394820 RIMBP3Q9UFD9 1639 aa15.96■□□□□ 0.15
NFKB1-202ENST00000394820 HSP90B1P14625 803 aaKnown RBP15.96■□□□□ 0.15
NFKB1-202ENST00000394820 ARHGAP45Q92619 1136 aa15.96■□□□□ 0.15
NFKB1-202ENST00000394820 CPA1P15085 419 aa15.96■□□□□ 0.14
NFKB1-202ENST00000394820 CHL1O00533 1208 aa15.95■□□□□ 0.14
NFKB1-202ENST00000394820 TCEANC2Q96MN5 208 aa15.95■□□□□ 0.14
NFKB1-202ENST00000394820 ATP7BP35670 1465 aa15.95■□□□□ 0.14
NFKB1-202ENST00000394820 DIAPH3Q9NSV4 1193 aa15.95■□□□□ 0.14
NFKB1-202ENST00000394820 ZNF330Q9Y3S2 320 aaPredicted RBP15.95■□□□□ 0.14
NFKB1-202ENST00000394820 PLEKHM2Q8IWE5 1019 aa15.95■□□□□ 0.14
NFKB1-202ENST00000394820 AIMP1Q12904 312 aaKnown RBP15.94■□□□□ 0.14
NFKB1-202ENST00000394820 NCBP3Q53F19 620 aaKnown RBP15.94■□□□□ 0.14
NFKB1-202ENST00000394820 LRRC59Q96AG4 307 aaKnown RBP15.94■□□□□ 0.14
NFKB1-202ENST00000394820 SPG7Q9UQ90 795 aa15.94■□□□□ 0.14
NFKB1-202ENST00000394820 TMX3Q96JJ7 454 aa15.94■□□□□ 0.14
NFKB1-202ENST00000394820 MSH6P52701 1360 aa15.94■□□□□ 0.14
NFKB1-202ENST00000394820 PDCL3Q9H2J4 239 aa15.93■□□□□ 0.14
NFKB1-202ENST00000394820 CPSF1Q10570 1443 aaKnown RBP15.93■□□□□ 0.14
NFKB1-202ENST00000394820 HDGFL1Q5TGJ6 251 aa15.93■□□□□ 0.14
NFKB1-202ENST00000394820 GNAT3A8MTJ3 354 aa15.93■□□□□ 0.14
NFKB1-202ENST00000394820 TTC22Q5TAA0 569 aa15.93■□□□□ 0.14
NFKB1-202ENST00000394820 CEP85Q6P2H3 762 aa15.93■□□□□ 0.14
NFKB1-202ENST00000394820 PLEKHG3A1L390 1219 aa15.92■□□□□ 0.14
NFKB1-202ENST00000394820 ABCC4O15439 1325 aa15.92■□□□□ 0.14
NFKB1-202ENST00000394820 PHF14O94880 888 aa15.92■□□□□ 0.14
NFKB1-202ENST00000394820 GSPT1P15170 499 aaKnown RBP15.92■□□□□ 0.14
NFKB1-202ENST00000394820 GIMAP6Q6P9H5 292 aa15.92■□□□□ 0.14
NFKB1-202ENST00000394820 ZNF771Q7L3S4 317 aaPredicted RBP15.92■□□□□ 0.14
NFKB1-202ENST00000394820 BICD2Q8TD16 824 aa15.92■□□□□ 0.14
NFKB1-202ENST00000394820 NSFL1CQ9UNZ2 370 aaKnown RBP15.92■□□□□ 0.14
NFKB1-202ENST00000394820 TEFQ10587 303 aa15.92■□□□□ 0.14
NFKB1-202ENST00000394820 MPRIPQ6WCQ1 1025 aa15.92■□□□□ 0.14
NFKB1-202ENST00000394820 CSPP1Q1MSJ5 1256 aa15.91■□□□□ 0.14
NFKB1-202ENST00000394820 TMEM63CQ9P1W3 806 aa15.91■□□□□ 0.14
NFKB1-202ENST00000394820 DIP2BQ9P265 1576 aa15.91■□□□□ 0.14
NFKB1-202ENST00000394820 MAP2P11137 1827 aaKnown RBP15.91■□□□□ 0.14
NFKB1-202ENST00000394820 RBM25P49756 843 aaKnown RBP15.91■□□□□ 0.14
NFKB1-202ENST00000394820 FLIIQ13045 1269 aa15.91■□□□□ 0.14
NFKB1-202ENST00000394820 CKAP2LQ8IYA6 745 aa15.91■□□□□ 0.14
NFKB1-202ENST00000394820 CCDC83Q8IWF9 413 aa15.91■□□□□ 0.14
NFKB1-202ENST00000394820 SNX21Q969T3 373 aa15.91■□□□□ 0.14
NFKB1-202ENST00000394820 FMNL2Q96PY5 1086 aa15.91■□□□□ 0.14
NFKB1-202ENST00000394820 SIL1Q9H173 461 aa15.91■□□□□ 0.14
NFKB1-202ENST00000394820 PHF8Q9UPP1 1060 aa15.91■□□□□ 0.14
NFKB1-202ENST00000394820 ANKRD44Q8N8A2 993 aa15.9■□□□□ 0.14
NFKB1-202ENST00000394820 GNAI2P04899 355 aa15.9■□□□□ 0.14
NFKB1-202ENST00000394820 UBTFL1P0CB47 393 aaPredicted RBP15.9■□□□□ 0.14
NFKB1-202ENST00000394820 CCDC30Q5VVM6 783 aa15.9■□□□□ 0.14
NFKB1-202ENST00000394820 DCTPP1Q9H773 170 aa15.9■□□□□ 0.14
NFKB1-202ENST00000394820 PHAXQ9H814 394 aaKnown RBP15.9■□□□□ 0.14
NFKB1-202ENST00000394820 TFIP11Q9UBB9 837 aaKnown RBP15.9■□□□□ 0.14
NFKB1-202ENST00000394820 ISY1Q9ULR0 285 aaKnown RBP15.9■□□□□ 0.14
NFKB1-202ENST00000394820 LRRFIP2Q9Y608 721 aaKnown RBP15.9■□□□□ 0.14
NFKB1-202ENST00000394820 ZC3H6P61129 1189 aaKnown RBP15.9■□□□□ 0.14
NFKB1-202ENST00000394820 GADD45BO75293 160 aaPredicted RBP15.89■□□□□ 0.13
NFKB1-202ENST00000394820 MBD3O95983 291 aa15.89■□□□□ 0.13
NFKB1-202ENST00000394820 RPAP2Q8IXW5 612 aaPredicted RBP15.89■□□□□ 0.13
NFKB1-202ENST00000394820 LRRCC1Q9C099 1032 aa15.89■□□□□ 0.13
NFKB1-202ENST00000394820 AATKQ6ZMQ8 1374 aa15.89■□□□□ 0.13
NFKB1-202ENST00000394820 HOXC9P31274 260 aa15.89■□□□□ 0.13
NFKB1-202ENST00000394820 TRIM5Q9C035 493 aa15.89■□□□□ 0.13
NFKB1-202ENST00000394820 CNPY2Q9Y2B0 182 aa15.89■□□□□ 0.13
NFKB1-202ENST00000394820 STK11IPQ8N1F8 1099 aa15.89■□□□□ 0.13
NFKB1-202ENST00000394820 USP26Q9BXU7 913 aa15.88■□□□□ 0.13
NFKB1-202ENST00000394820 C9orf78Q9NZ63 289 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms