RNA–Protein interactions for RNA: ENST00000379066.5

PRKD3-202, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRKD3, Length 6,111 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-202ENST00000379066 TOP2BQ02880 1626 aa4.27□□□□□ -1.73
PRKD3-202ENST00000379066 EPRSP07814 1512 aaKnown RBP4.27□□□□□ -1.73
PRKD3-202ENST00000379066 EIF3AQ14152 1382 aaKnown RBP4.27□□□□□ -1.73
PRKD3-202ENST00000379066 SHTN1A0MZ66 631 aa4.27□□□□□ -1.73
PRKD3-202ENST00000379066 RAPGEF4Q8WZA2 1011 aa4.27□□□□□ -1.73
PRKD3-202ENST00000379066 TRIM11Q96F44 468 aa4.27□□□□□ -1.73
PRKD3-202ENST00000379066 RASSF4Q9H2L5 321 aa4.27□□□□□ -1.73
PRKD3-202ENST00000379066 QTRT2Q9H974 415 aaKnown RBP4.27□□□□□ -1.73
PRKD3-202ENST00000379066 KLF15Q9UIH9 416 aa4.27□□□□□ -1.73
PRKD3-202ENST00000379066 CEP162Q5TB80 1403 aa4.27□□□□□ -1.73
PRKD3-202ENST00000379066 PPFIA3O75145 1194 aa4.27□□□□□ -1.73
PRKD3-202ENST00000379066 NEBLO76041 1014 aa4.27□□□□□ -1.73
PRKD3-202ENST00000379066 APBA3O96018 575 aa4.27□□□□□ -1.73
PRKD3-202ENST00000379066 FLT3P36888 993 aa4.27□□□□□ -1.73
PRKD3-202ENST00000379066 LMBRD2Q68DH5 695 aaPredicted RBP4.27□□□□□ -1.73
PRKD3-202ENST00000379066 SMG6Q86US8 1419 aaKnown RBP4.27□□□□□ -1.73
PRKD3-202ENST00000379066 KIF14Q15058 1648 aa4.27□□□□□ -1.73
PRKD3-202ENST00000379066 SKILP12757 684 aa4.27□□□□□ -1.73
PRKD3-202ENST00000379066 HMGB2P26583 209 aaKnown RBP4.27□□□□□ -1.73
PRKD3-202ENST00000379066 MAP2K2P36507 400 aa4.27□□□□□ -1.73
PRKD3-202ENST00000379066 AP1ARQ63HQ0 302 aa4.27□□□□□ -1.73
PRKD3-202ENST00000379066 C11orf96Q7Z7L8 435 aa4.27□□□□□ -1.73
PRKD3-202ENST00000379066 TRIM74Q86UV6 250 aa4.27□□□□□ -1.73
PRKD3-202ENST00000379066 TRIM73Q86UV7 250 aa4.27□□□□□ -1.73
PRKD3-202ENST00000379066 OGFOD1Q8N543 542 aa4.27□□□□□ -1.73
PRKD3-202ENST00000379066 SPC24Q8NBT2 197 aa4.27□□□□□ -1.73
PRKD3-202ENST00000379066 NEUROD6Q96NK8 337 aa4.27□□□□□ -1.73
PRKD3-202ENST00000379066 RANBP17Q9H2T7 1088 aaKnown RBP4.27□□□□□ -1.73
PRKD3-202ENST00000379066 UBAP1Q9NZ09 502 aa4.27□□□□□ -1.73
PRKD3-202ENST00000379066 PDZRN3Q9UPQ7 1066 aa4.27□□□□□ -1.73
PRKD3-202ENST00000379066 CDC37L1Q7L3B6 337 aa4.27□□□□□ -1.73
PRKD3-202ENST00000379066 TSPYL2Q9H2G4 693 aaPredicted RBP4.27□□□□□ -1.73
PRKD3-202ENST00000379066 FBXO9Q9UK97 447 aaPredicted RBP4.27□□□□□ -1.73
PRKD3-202ENST00000379066 ITM2BQ9Y287 266 aa4.27□□□□□ -1.73
PRKD3-202ENST00000379066 NBPF7P0C2Y1 421 aaPredicted RBP4.26□□□□□ -1.73
PRKD3-202ENST00000379066 HELBQ8NG08 1087 aaPredicted RBP4.26□□□□□ -1.73
PRKD3-202ENST00000379066 CCDC47Q96A33 483 aaKnown RBP4.26□□□□□ -1.73
PRKD3-202ENST00000379066 MRFAP1L1Q96HT8 127 aa4.26□□□□□ -1.73
PRKD3-202ENST00000379066 COG3Q96JB2 828 aa4.26□□□□□ -1.73
PRKD3-202ENST00000379066 USP5P45974 858 aa4.26□□□□□ -1.73
PRKD3-202ENST00000379066 CCDC15Q0P6D6 951 aa4.26□□□□□ -1.73
PRKD3-202ENST00000379066 ZSCAN26Q16670 478 aa4.26□□□□□ -1.73
PRKD3-202ENST00000379066 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.26□□□□□ -1.73
PRKD3-202ENST00000379066 CEP89Q96ST8 783 aa4.26□□□□□ -1.73
PRKD3-202ENST00000379066 XRCC6P12956 609 aaKnown RBP eCLIP4.26□□□□□ -1.73
PRKD3-202ENST00000379066 AKNAD1Q5T1N1 836 aa4.26□□□□□ -1.73
PRKD3-202ENST00000379066 KIF3CO14782 793 aa4.26□□□□□ -1.73
PRKD3-202ENST00000379066 GYS2P54840 703 aa4.26□□□□□ -1.73
PRKD3-202ENST00000379066 C10orf67Q8IYJ2 551 aa4.26□□□□□ -1.73
PRKD3-202ENST00000379066 CENPOQ9BU64 300 aa4.26□□□□□ -1.73
PRKD3-202ENST00000379066 TMEM165Q9HC07 324 aa4.26□□□□□ -1.73
PRKD3-202ENST00000379066 BRMS1Q9HCU9 246 aa4.26□□□□□ -1.73
PRKD3-202ENST00000379066 IQGAP2Q13576 1575 aa4.26□□□□□ -1.73
PRKD3-202ENST00000379066 HMGB1P1B2RPK0 211 aaPredicted RBP4.25□□□□□ -1.73
PRKD3-202ENST00000379066 IGHDP01880 384 aa4.25□□□□□ -1.73
PRKD3-202ENST00000379066 BDNFP23560 247 aa4.25□□□□□ -1.73
PRKD3-202ENST00000379066 DZIP1Q86YF9 867 aaKnown RBP4.25□□□□□ -1.73
PRKD3-202ENST00000379066 RPUSD2Q8IZ73 545 aaKnown RBP4.25□□□□□ -1.73
PRKD3-202ENST00000379066 TRAIPQ9BWF2 469 aa4.25□□□□□ -1.73
PRKD3-202ENST00000379066 CWC15Q9P013 229 aaKnown RBP4.25□□□□□ -1.73
PRKD3-202ENST00000379066 RRM1P23921 792 aa4.25□□□□□ -1.73
PRKD3-202ENST00000379066 E2F4Q16254 413 aa4.25□□□□□ -1.73
PRKD3-202ENST00000379066 TTLL5Q6EMB2 1281 aa4.25□□□□□ -1.73
PRKD3-202ENST00000379066 THOC1Q96FV9 657 aaKnown RBP4.25□□□□□ -1.73
PRKD3-202ENST00000379066 ACSBG1Q96GR2 724 aa4.25□□□□□ -1.73
PRKD3-202ENST00000379066 CCDC85AQ96PX6 553 aaPredicted RBP4.25□□□□□ -1.73
PRKD3-202ENST00000379066 MAGEC2Q9UBF1 373 aaPredicted RBP4.25□□□□□ -1.73
PRKD3-202ENST00000379066 TNRQ92752 1358 aa4.25□□□□□ -1.73
PRKD3-202ENST00000379066 JMYQ8N9B5 988 aa4.25□□□□□ -1.73
PRKD3-202ENST00000379066 DUSP9Q99956 384 aaKnown RBP4.25□□□□□ -1.73
PRKD3-202ENST00000379066 HECW1Q76N89 1606 aa4.25□□□□□ -1.73
PRKD3-202ENST00000379066 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.25□□□□□ -1.73
PRKD3-202ENST00000379066 KIF5CO60282 957 aa4.25□□□□□ -1.73
PRKD3-202ENST00000379066 OFD1O75665 1012 aa4.25□□□□□ -1.73
PRKD3-202ENST00000379066 ATP6V1AP38606 617 aa4.25□□□□□ -1.73
PRKD3-202ENST00000379066 ATP2B3Q16720 1220 aa4.25□□□□□ -1.73
PRKD3-202ENST00000379066 JAKMIP3Q5VZ66 844 aa4.25□□□□□ -1.73
PRKD3-202ENST00000379066 VPS37DQ86XT2 251 aa4.25□□□□□ -1.73
PRKD3-202ENST00000379066 ANKRD20A12PQ8NF67 263 aa4.25□□□□□ -1.73
PRKD3-202ENST00000379066 GPATCH3Q96I76 525 aa4.25□□□□□ -1.73
PRKD3-202ENST00000379066 RBM47A0AV96 593 aaKnown RBP4.25□□□□□ -1.73
PRKD3-202ENST00000379066 KLHL33A6NCF5 533 aa4.25□□□□□ -1.73
PRKD3-202ENST00000379066 VPS53Q5VIR6 699 aa4.25□□□□□ -1.73
PRKD3-202ENST00000379066 MED4Q9NPJ6 270 aa4.25□□□□□ -1.73
PRKD3-202ENST00000379066 MRFAP1Q9Y605 127 aa4.25□□□□□ -1.73
PRKD3-202ENST00000379066 ZPR1O75312 459 aa4.24□□□□□ -1.73
PRKD3-202ENST00000379066 HMMRO75330 724 aa4.24□□□□□ -1.73
PRKD3-202ENST00000379066 GUCY2CP25092 1073 aa4.24□□□□□ -1.73
PRKD3-202ENST00000379066 APLP1P51693 650 aa4.24□□□□□ -1.73
PRKD3-202ENST00000379066 ZC3H6P61129 1189 aaKnown RBP4.24□□□□□ -1.73
PRKD3-202ENST00000379066 BECN1Q14457 450 aa4.24□□□□□ -1.73
PRKD3-202ENST00000379066 MAP3K20Q9NYL2 800 aaKnown RBP4.24□□□□□ -1.73
PRKD3-202ENST00000379066 TFCP2L1Q9NZI6 479 aa4.24□□□□□ -1.73
PRKD3-202ENST00000379066 KIF6Q6ZMV9 814 aa4.24□□□□□ -1.73
PRKD3-202ENST00000379066 CCDC146Q8IYE0 955 aa4.24□□□□□ -1.73
PRKD3-202ENST00000379066 ROCK2O75116 1388 aaKnown RBP4.24□□□□□ -1.73
PRKD3-202ENST00000379066 TMF1P82094 1093 aa4.24□□□□□ -1.73
PRKD3-202ENST00000379066 ARMC9Q7Z3E5 817 aa4.24□□□□□ -1.73
PRKD3-202ENST00000379066 CDCA7Q9BWT1 371 aaPredicted RBP4.24□□□□□ -1.73
PRKD3-202ENST00000379066 NRBP1Q9UHY1 535 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms