RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 APBB1O00213 710 aa13.64□□□□□ -0.23
CCDC40-203ENST00000374877 GNAI1P63096 354 aa13.64□□□□□ -0.23
CCDC40-203ENST00000374877 PKP1Q13835 747 aa13.64□□□□□ -0.23
CCDC40-203ENST00000374877 PLEKHM2Q8IWE5 1019 aa13.64□□□□□ -0.23
CCDC40-203ENST00000374877 MBIPQ9NS73 344 aa13.64□□□□□ -0.23
CCDC40-203ENST00000374877 ALS2Q96Q42 1657 aa13.64□□□□□ -0.23
CCDC40-203ENST00000374877 NFAT5O94916 1531 aa13.64□□□□□ -0.23
CCDC40-203ENST00000374877 PEAK1Q9H792 1746 aa13.64□□□□□ -0.23
CCDC40-203ENST00000374877 CLEC17AQ6ZS10 378 aa13.64□□□□□ -0.23
CCDC40-203ENST00000374877 SLAIN2Q9P270 581 aa13.64□□□□□ -0.23
CCDC40-203ENST00000374877 ABCC4O15439 1325 aa13.63□□□□□ -0.23
CCDC40-203ENST00000374877 MAP3K19Q56UN5 1328 aa13.63□□□□□ -0.23
CCDC40-203ENST00000374877 C16orf71Q8IYS4 520 aaPredicted RBP13.63□□□□□ -0.23
CCDC40-203ENST00000374877 ZSCAN23Q3MJ62 389 aa13.63□□□□□ -0.23
CCDC40-203ENST00000374877 BRINP3Q76B58 766 aa13.63□□□□□ -0.23
CCDC40-203ENST00000374877 IBTKQ9P2D0 1353 aaPredicted RBP13.62□□□□□ -0.23
CCDC40-203ENST00000374877 PHRF1Q9P1Y6 1649 aaKnown RBP13.62□□□□□ -0.23
CCDC40-203ENST00000374877 API5Q9BZZ5 524 aaKnown RBP13.62□□□□□ -0.23
CCDC40-203ENST00000374877 TNS3Q68CZ2 1445 aa13.62□□□□□ -0.23
CCDC40-203ENST00000374877 C8orf58Q8NAV2 365 aa13.62□□□□□ -0.23
CCDC40-203ENST00000374877 ZNF445P59923 1031 aa13.61□□□□□ -0.23
CCDC40-203ENST00000374877 TTC22Q5TAA0 569 aa13.61□□□□□ -0.23
CCDC40-203ENST00000374877 IFT57Q9NWB7 429 aa13.61□□□□□ -0.23
CCDC40-203ENST00000374877 PRPF40AO75400 957 aaKnown RBP13.61□□□□□ -0.23
CCDC40-203ENST00000374877 OFD1O75665 1012 aa13.61□□□□□ -0.23
CCDC40-203ENST00000374877 LMBRD1Q9NUN5 540 aa13.61□□□□□ -0.23
CCDC40-203ENST00000374877 INTS3Q68E01 1043 aaKnown RBP13.61□□□□□ -0.23
CCDC40-203ENST00000374877 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.61□□□□□ -0.23
CCDC40-203ENST00000374877 USP26Q9BXU7 913 aa13.61□□□□□ -0.23
CCDC40-203ENST00000374877 MED1Q15648 1581 aaPredicted RBP13.6□□□□□ -0.23
CCDC40-203ENST00000374877 ARHGEF10O15013 1369 aa13.6□□□□□ -0.23
CCDC40-203ENST00000374877 ZGPATQ8N5A5 531 aaKnown RBP13.6□□□□□ -0.23
CCDC40-203ENST00000374877 OTUD7AQ8TE49 926 aaPredicted RBP13.6□□□□□ -0.23
CCDC40-203ENST00000374877 RBSNQ9H1K0 784 aa13.6□□□□□ -0.23
CCDC40-203ENST00000374877 RBM27Q9P2N5 1060 aaKnown RBP13.6□□□□□ -0.23
CCDC40-203ENST00000374877 ST18O60284 1047 aa13.6□□□□□ -0.23
CCDC40-203ENST00000374877 PRIM1P49642 420 aaKnown RBP13.6□□□□□ -0.23
CCDC40-203ENST00000374877 FOXD4L5Q5VV16 416 aaPredicted RBP13.6□□□□□ -0.23
CCDC40-203ENST00000374877 NUTM2GQ5VZR2 741 aa13.6□□□□□ -0.23
CCDC40-203ENST00000374877 FOXD4L4Q8WXT5 416 aaPredicted RBP13.6□□□□□ -0.23
CCDC40-203ENST00000374877 CFAP44Q96MT7 982 aa13.6□□□□□ -0.23
CCDC40-203ENST00000374877 RBM10P98175 930 aaKnown RBP13.59□□□□□ -0.23
CCDC40-203ENST00000374877 XPCQ01831 940 aaPredicted RBP13.59□□□□□ -0.23
CCDC40-203ENST00000374877 EIF4A2Q14240 407 aaKnown RBP13.59□□□□□ -0.23
CCDC40-203ENST00000374877 CASC1Q6TDU7 716 aa13.59□□□□□ -0.23
CCDC40-203ENST00000374877 DCTPP1Q9H773 170 aa13.59□□□□□ -0.23
CCDC40-203ENST00000374877 R3HCC1Q9Y3T6 440 aaKnown RBP13.59□□□□□ -0.23
CCDC40-203ENST00000374877 SOS2Q07890 1332 aaPredicted RBP13.59□□□□□ -0.23
CCDC40-203ENST00000374877 FAM83GA6ND36 823 aa13.59□□□□□ -0.23
CCDC40-203ENST00000374877 RGPD1P0DJD0 1748 aa13.59□□□□□ -0.23
CCDC40-203ENST00000374877 AMPHP49418 695 aa13.59□□□□□ -0.23
CCDC40-203ENST00000374877 SPATA31A3Q5VYP0 1347 aa13.59□□□□□ -0.23
CCDC40-203ENST00000374877 DCTN1Q14203 1278 aa13.59□□□□□ -0.23
CCDC40-203ENST00000374877 CHAMP1Q96JM3 812 aa13.59□□□□□ -0.23
CCDC40-203ENST00000374877 PDCL3Q9H2J4 239 aa13.59□□□□□ -0.23
CCDC40-203ENST00000374877 SMARCA5O60264 1052 aaPredicted RBP13.58□□□□□ -0.24
CCDC40-203ENST00000374877 NHSL1Q5SYE7 1610 aa13.58□□□□□ -0.24
CCDC40-203ENST00000374877 CYP2E1P05181 493 aaPredicted RBP13.58□□□□□ -0.24
CCDC40-203ENST00000374877 HOXC9P31274 260 aa13.58□□□□□ -0.24
CCDC40-203ENST00000374877 SDSP20132 328 aa13.57□□□□□ -0.24
CCDC40-203ENST00000374877 HSP90AB2PQ58FF8 381 aa13.57□□□□□ -0.24
CCDC40-203ENST00000374877 CWC22Q9HCG8 908 aaKnown RBP13.57□□□□□ -0.24
CCDC40-203ENST00000374877 SOX12O15370 315 aa13.57□□□□□ -0.24
CCDC40-203ENST00000374877 GCP02774 474 aa13.57□□□□□ -0.24
CCDC40-203ENST00000374877 ZNF853P0CG23 659 aa13.57□□□□□ -0.24
CCDC40-203ENST00000374877 IP6K1Q92551 441 aa13.57□□□□□ -0.24
CCDC40-203ENST00000374877 GPT2Q8TD30 523 aa13.56□□□□□ -0.24
CCDC40-203ENST00000374877 ABCC6O95255 1503 aa13.56□□□□□ -0.24
CCDC40-203ENST00000374877 LMOD3Q0VAK6 560 aa13.56□□□□□ -0.24
CCDC40-203ENST00000374877 ARHGEF25Q86VW2 580 aa13.56□□□□□ -0.24
CCDC40-203ENST00000374877 FAM13BQ9NYF5 915 aa13.56□□□□□ -0.24
CCDC40-203ENST00000374877 SYCE3A1L190 88 aa13.55□□□□□ -0.24
CCDC40-203ENST00000374877 NOL7Q9UMY1 257 aaKnown RBP13.55□□□□□ -0.24
CCDC40-203ENST00000374877 LTN1O94822 1766 aa13.55□□□□□ -0.24
CCDC40-203ENST00000374877 ANKRD44Q8N8A2 993 aa13.55□□□□□ -0.24
CCDC40-203ENST00000374877 DDX17Q92841 729 aaKnown RBP13.55□□□□□ -0.24
CCDC40-203ENST00000374877 REC8O95072 547 aa13.54□□□□□ -0.24
CCDC40-203ENST00000374877 HS1BP3Q53T59 392 aa13.54□□□□□ -0.24
CCDC40-203ENST00000374877 RNF214Q8ND24 703 aa13.54□□□□□ -0.24
CCDC40-203ENST00000374877 ZDHHC9Q9Y397 364 aa13.54□□□□□ -0.24
CCDC40-203ENST00000374877 CRYBG1Q9Y4K1 1723 aa13.54□□□□□ -0.24
CCDC40-203ENST00000374877 KDRP35968 1356 aa13.54□□□□□ -0.24
CCDC40-203ENST00000374877 IGSF1Q8N6C5 1336 aa13.54□□□□□ -0.24
CCDC40-203ENST00000374877 KRT24Q2M2I5 525 aa13.54□□□□□ -0.24
CCDC40-203ENST00000374877 LMOD2Q6P5Q4 547 aa13.54□□□□□ -0.24
CCDC40-203ENST00000374877 TMEM63CQ9P1W3 806 aa13.54□□□□□ -0.24
CCDC40-203ENST00000374877 CEP85Q6P2H3 762 aa13.53□□□□□ -0.24
CCDC40-203ENST00000374877 AHDC1Q5TGY3 1603 aaPredicted RBP13.53□□□□□ -0.24
CCDC40-203ENST00000374877 PDLIM2Q96JY6 352 aa13.53□□□□□ -0.24
CCDC40-203ENST00000374877 RPAP2Q8IXW5 612 aaPredicted RBP13.53□□□□□ -0.24
CCDC40-203ENST00000374877 NSFL1CQ9UNZ2 370 aaKnown RBP13.53□□□□□ -0.24
CCDC40-203ENST00000374877 CPDO75976 1380 aa13.52□□□□□ -0.24
CCDC40-203ENST00000374877 LRSAM1Q6UWE0 723 aa13.52□□□□□ -0.25
CCDC40-203ENST00000374877 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.52□□□□□ -0.25
CCDC40-203ENST00000374877 UQCRHLA0A096LP55 91 aa13.52□□□□□ -0.25
CCDC40-203ENST00000374877 ERC2O15083 957 aa13.52□□□□□ -0.25
CCDC40-203ENST00000374877 UQCRHP07919 91 aa13.52□□□□□ -0.25
CCDC40-203ENST00000374877 NEK4P51957 841 aa13.52□□□□□ -0.25
CCDC40-203ENST00000374877 NOL8Q76FK4 1167 aaKnown RBP13.52□□□□□ -0.25
CCDC40-203ENST00000374877 MEIS3Q99687 375 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms