RNA–Protein interactions for RNA: ENST00000369528.9

SIKE1-203, Transcript of suppressor of IKBKE 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SIKE1, Length 5,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIKE1-203ENST00000369528 USP25Q9UHP3 1055 aa18.23■□□□□ 0.51
SIKE1-203ENST00000369528 CASKIN1Q8WXD9 1431 aa18.23■□□□□ 0.51
SIKE1-203ENST00000369528 YEATS4O95619 227 aa18.23■□□□□ 0.51
SIKE1-203ENST00000369528 CAVIN2O95810 425 aa18.23■□□□□ 0.51
SIKE1-203ENST00000369528 HDGFL1Q5TGJ6 251 aa18.23■□□□□ 0.51
SIKE1-203ENST00000369528 CWC27Q6UX04 472 aaKnown RBP18.23■□□□□ 0.51
SIKE1-203ENST00000369528 KLHL34Q8N239 644 aa18.23■□□□□ 0.51
SIKE1-203ENST00000369528 RAI14Q9P0K7 980 aa18.23■□□□□ 0.51
SIKE1-203ENST00000369528 HFM1A2PYH4 1435 aa18.22■□□□□ 0.51
SIKE1-203ENST00000369528 TATP17735 454 aaPredicted RBP18.22■□□□□ 0.51
SIKE1-203ENST00000369528 AACSQ86V21 672 aa18.22■□□□□ 0.51
SIKE1-203ENST00000369528 FGFR1OPO95684 399 aaKnown RBP18.22■□□□□ 0.51
SIKE1-203ENST00000369528 MAP4K4O95819 1239 aaPredicted RBP18.22■□□□□ 0.51
SIKE1-203ENST00000369528 UBAC1Q9BSL1 405 aa18.22■□□□□ 0.51
SIKE1-203ENST00000369528 TAOK3Q9H2K8 898 aa18.22■□□□□ 0.51
SIKE1-203ENST00000369528 SNW1Q13573 536 aaKnown RBP18.21■□□□□ 0.51
SIKE1-203ENST00000369528 PHAXQ9H814 394 aaKnown RBP18.21■□□□□ 0.51
SIKE1-203ENST00000369528 TNPO1Q92973 898 aaKnown RBP18.21■□□□□ 0.51
SIKE1-203ENST00000369528 CLCN1P35523 988 aa18.21■□□□□ 0.51
SIKE1-203ENST00000369528 TSG101Q99816 390 aa18.21■□□□□ 0.51
SIKE1-203ENST00000369528 SSBP05455 408 aaKnown RBP eCLIP18.21■□□□□ 0.5
SIKE1-203ENST00000369528 CCDC178Q5BJE1 867 aa18.21■□□□□ 0.5
SIKE1-203ENST00000369528 RBM42Q9BTD8 480 aaKnown RBP18.21■□□□□ 0.5
SIKE1-203ENST00000369528 CCDC171Q6TFL3 1326 aa18.2■□□□□ 0.5
SIKE1-203ENST00000369528 CFAP70Q5T0N1 1121 aa18.2■□□□□ 0.5
SIKE1-203ENST00000369528 ALS2CR12Q96Q35 445 aa18.2■□□□□ 0.5
SIKE1-203ENST00000369528 SPECC1Q5M775 1068 aa18.2■□□□□ 0.5
SIKE1-203ENST00000369528 C6orf163Q5TEZ5 329 aa18.2■□□□□ 0.5
SIKE1-203ENST00000369528 CEP135Q66GS9 1140 aa18.2■□□□□ 0.5
SIKE1-203ENST00000369528 CACNA2D4Q7Z3S7 1137 aa18.2■□□□□ 0.5
SIKE1-203ENST00000369528 CCDC150Q8NCX0 1101 aa18.2■□□□□ 0.5
SIKE1-203ENST00000369528 ADCY5O95622 1261 aa18.2■□□□□ 0.5
SIKE1-203ENST00000369528 BCCIPQ9P287 314 aaKnown RBP eCLIP18.2■□□□□ 0.5
SIKE1-203ENST00000369528 GSTTP1A0A1W2PQM5 241 aa18.19■□□□□ 0.5
SIKE1-203ENST00000369528 TRMT1Q9NXH9 659 aaKnown RBP18.19■□□□□ 0.5
SIKE1-203ENST00000369528 KIF21BO75037 1637 aa18.19■□□□□ 0.5
SIKE1-203ENST00000369528 FAM177BA6PVY3 158 aa18.19■□□□□ 0.5
SIKE1-203ENST00000369528 STX1AQ16623 288 aa18.19■□□□□ 0.5
SIKE1-203ENST00000369528 ESCO1Q5FWF5 840 aa18.19■□□□□ 0.5
SIKE1-203ENST00000369528 GTPBP4Q9BZE4 634 aaKnown RBP18.19■□□□□ 0.5
SIKE1-203ENST00000369528 SSR1P43307 286 aaKnown RBP18.18■□□□□ 0.5
SIKE1-203ENST00000369528 GOPCQ9HD26 462 aa18.18■□□□□ 0.5
SIKE1-203ENST00000369528 SPDYE4A6NLX3 237 aa18.18■□□□□ 0.5
SIKE1-203ENST00000369528 SSFA2P28290 1259 aa18.18■□□□□ 0.5
SIKE1-203ENST00000369528 HSPA4P34932 840 aa18.18■□□□□ 0.5
SIKE1-203ENST00000369528 NUP88Q99567 741 aaPredicted RBP18.17■□□□□ 0.5
SIKE1-203ENST00000369528 SRGAP3O43295 1099 aa18.17■□□□□ 0.5
SIKE1-203ENST00000369528 NEBLO76041 1014 aa18.17■□□□□ 0.5
SIKE1-203ENST00000369528 FERMT3Q86UX7 667 aa18.17■□□□□ 0.5
SIKE1-203ENST00000369528 ZNF692Q9BU19 519 aaPredicted RBP18.17■□□□□ 0.5
SIKE1-203ENST00000369528 RAD54L2Q9Y4B4 1467 aa18.17■□□□□ 0.5
SIKE1-203ENST00000369528 CEP112Q8N8E3 955 aa18.17■□□□□ 0.5
SIKE1-203ENST00000369528 TBC1D2Q9BYX2 928 aa18.17■□□□□ 0.5
SIKE1-203ENST00000369528 PRAM1Q96QH2 718 aa18.16■□□□□ 0.5
SIKE1-203ENST00000369528 SIL1Q9H173 461 aa18.16■□□□□ 0.5
SIKE1-203ENST00000369528 U3KPZ7 1027 aaPredicted RBP18.16■□□□□ 0.5
SIKE1-203ENST00000369528 RAB11FIP3O75154 756 aa18.16■□□□□ 0.5
SIKE1-203ENST00000369528 KLHL40Q2TBA0 621 aa18.16■□□□□ 0.5
SIKE1-203ENST00000369528 ANKRD18BA2A2Z9 1011 aa18.16■□□□□ 0.5
SIKE1-203ENST00000369528 SLFN5Q08AF3 891 aa18.16■□□□□ 0.5
SIKE1-203ENST00000369528 EHBP1Q8NDI1 1231 aa18.16■□□□□ 0.5
SIKE1-203ENST00000369528 TUBB4AP04350 444 aa18.16■□□□□ 0.5
SIKE1-203ENST00000369528 HOOK3Q86VS8 718 aa18.16■□□□□ 0.5
SIKE1-203ENST00000369528 HMGB1P09429 215 aaKnown RBP18.15■□□□□ 0.5
SIKE1-203ENST00000369528 SYNJ2O15056 1496 aa18.15■□□□□ 0.5
SIKE1-203ENST00000369528 TXNDC2Q86VQ3 553 aa18.15■□□□□ 0.5
SIKE1-203ENST00000369528 TDO2P48775 406 aa18.15■□□□□ 0.5
SIKE1-203ENST00000369528 TMC6Q7Z403 805 aa18.15■□□□□ 0.5
SIKE1-203ENST00000369528 UBE4AQ14139 1066 aa18.15■□□□□ 0.5
SIKE1-203ENST00000369528 HLTFQ14527 1009 aaKnown RBP eCLIP18.15■□□□□ 0.5
SIKE1-203ENST00000369528 GLRX3O76003 335 aaKnown RBP18.15■□□□□ 0.5
SIKE1-203ENST00000369528 KIF20AO95235 890 aa18.15■□□□□ 0.5
SIKE1-203ENST00000369528 HSF2BPO75031 334 aa18.14■□□□□ 0.49
SIKE1-203ENST00000369528 CABP4P57796 275 aa18.14■□□□□ 0.49
SIKE1-203ENST00000369528 ANAPC15P60006 121 aa18.14■□□□□ 0.49
SIKE1-203ENST00000369528 LIMCH1Q9UPQ0 1083 aa18.14■□□□□ 0.49
SIKE1-203ENST00000369528 DHX29Q7Z478 1369 aaKnown RBP18.14■□□□□ 0.49
SIKE1-203ENST00000369528 SPG7Q9UQ90 795 aa18.14■□□□□ 0.49
SIKE1-203ENST00000369528 MX1P20591 662 aa18.13■□□□□ 0.49
SIKE1-203ENST00000369528 SULT6B1Q6IMI4 303 aa18.13■□□□□ 0.49
SIKE1-203ENST00000369528 MAATS1Q7Z4T9 603 aa18.13■□□□□ 0.49
SIKE1-203ENST00000369528 ANKRD30BQ9BXX2 1392 aa18.13■□□□□ 0.49
SIKE1-203ENST00000369528 POLA1P09884 1462 aaPredicted RBP18.13■□□□□ 0.49
SIKE1-203ENST00000369528 CKAP4Q07065 602 aaKnown RBP18.13■□□□□ 0.49
SIKE1-203ENST00000369528 KLHL10Q6JEL2 608 aa18.13■□□□□ 0.49
SIKE1-203ENST00000369528 BBXQ8WY36 941 aaPredicted RBP18.13■□□□□ 0.49
SIKE1-203ENST00000369528 PLEKHH2Q8IVE3 1493 aa18.13■□□□□ 0.49
SIKE1-203ENST00000369528 CCDC196A0A1B0GTZ2 297 aa18.13■□□□□ 0.49
SIKE1-203ENST00000369528 FKBP4Q02790 459 aaKnown RBP eCLIP18.13■□□□□ 0.49
SIKE1-203ENST00000369528 LARP1Q6PKG0 1096 aaKnown RBP18.13■□□□□ 0.49
SIKE1-203ENST00000369528 PROSER2Q86WR7 435 aaPredicted RBP18.13■□□□□ 0.49
SIKE1-203ENST00000369528 KIF1BPQ96EK5 621 aa18.13■□□□□ 0.49
SIKE1-203ENST00000369528 C8orf76Q96K31 380 aa18.13■□□□□ 0.49
SIKE1-203ENST00000369528 ATP2B2Q01814 1243 aa18.12■□□□□ 0.49
SIKE1-203ENST00000369528 ZNF530Q6P9A1 599 aaPredicted RBP18.12■□□□□ 0.49
SIKE1-203ENST00000369528 TMEM57Q8N5G2 664 aa18.12■□□□□ 0.49
SIKE1-203ENST00000369528 NSRP1Q9H0G5 558 aaKnown RBP18.12■□□□□ 0.49
SIKE1-203ENST00000369528 CEP126Q9P2H0 1117 aa18.12■□□□□ 0.49
SIKE1-203ENST00000369528 TRIM21P19474 475 aaKnown RBP18.12■□□□□ 0.49
SIKE1-203ENST00000369528 DNAI2Q9GZS0 605 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms