RNA–Protein interactions for RNA: ENST00000368547.3

ECHS1-201, Transcript of enoyl-CoA hydratase, short chain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHS1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHS1-201ENST00000368547 NHSQ6T4R5 1651 aa38.63■■■■□ 3.77
ECHS1-201ENST00000368547 KCNQ2O43526 872 aa38.61■■■■□ 3.77
ECHS1-201ENST00000368547 CALD1Q05682 793 aaKnown RBP38.61■■■■□ 3.77
ECHS1-201ENST00000368547 WDR63Q8IWG1 891 aa38.61■■■■□ 3.77
ECHS1-201ENST00000368547 TMOD3Q9NYL9 352 aa38.61■■■■□ 3.77
ECHS1-201ENST00000368547 TAF7Q15545 349 aaPredicted RBP38.58■■■■□ 3.77
ECHS1-201ENST00000368547 PIGBQ92521 554 aa38.57■■■■□ 3.77
ECHS1-201ENST00000368547 LAS1LQ9Y4W2 734 aaKnown RBP38.56■■■■□ 3.76
ECHS1-201ENST00000368547 PTF1AQ7RTS3 328 aa38.55■■■■□ 3.76
ECHS1-201ENST00000368547 IL16Q14005 1332 aa38.54■■■■□ 3.76
ECHS1-201ENST00000368547 GOLGA2Q08379 1002 aa38.54■■■■□ 3.76
ECHS1-201ENST00000368547 MIS18AQ9NYP9 233 aa38.54■■■■□ 3.76
ECHS1-201ENST00000368547 CFAP44Q96MT7 982 aa38.53■■■■□ 3.76
ECHS1-201ENST00000368547 BTAF1O14981 1849 aa38.53■■■■□ 3.76
ECHS1-201ENST00000368547 BTBD11A6QL63 1104 aa38.52■■■■□ 3.76
ECHS1-201ENST00000368547 TRIM37O94972 964 aa38.52■■■■□ 3.76
ECHS1-201ENST00000368547 IFT57Q9NWB7 429 aa38.52■■■■□ 3.76
ECHS1-201ENST00000368547 SPINK5Q9NQ38 1064 aaPredicted RBP38.52■■■■□ 3.76
ECHS1-201ENST00000368547 GNAI1P63096 354 aa38.51■■■■□ 3.76
ECHS1-201ENST00000368547 KDM3BQ7LBC6 1761 aa38.5■■■■□ 3.75
ECHS1-201ENST00000368547 ZNF853P0CG23 659 aa38.5■■■■□ 3.75
ECHS1-201ENST00000368547 BCL11BQ9C0K0 894 aaPredicted RBP38.5■■■■□ 3.75
ECHS1-201ENST00000368547 PAPPAQ13219 1627 aa38.49■■■■□ 3.75
ECHS1-201ENST00000368547 CHL1O00533 1208 aa38.49■■■■□ 3.75
ECHS1-201ENST00000368547 CDCA7LQ96GN5 454 aa38.49■■■■□ 3.75
ECHS1-201ENST00000368547 TSPYL4Q9UJ04 414 aa38.49■■■■□ 3.75
ECHS1-201ENST00000368547 SLC39A6Q13433 755 aa38.47■■■■□ 3.75
ECHS1-201ENST00000368547 BABAM1Q9NWV8 329 aa38.47■■■■□ 3.75
ECHS1-201ENST00000368547 MBIPQ9NS73 344 aa38.45■■■■□ 3.75
ECHS1-201ENST00000368547 ASAP1Q9ULH1 1129 aa38.45■■■■□ 3.75
ECHS1-201ENST00000368547 ZNF790Q6PG37 636 aa38.44■■■■□ 3.74
ECHS1-201ENST00000368547 TSR2Q969E8 191 aaKnown RBP38.44■■■■□ 3.74
ECHS1-201ENST00000368547 ATG3Q9NT62 314 aa38.44■■■■□ 3.74
ECHS1-201ENST00000368547 E9PSI1 815 aa38.43■■■■□ 3.74
ECHS1-201ENST00000368547 KCNQ3O43525 872 aa38.43■■■■□ 3.74
ECHS1-201ENST00000368547 SLFN5Q08AF3 891 aa38.43■■■■□ 3.74
ECHS1-201ENST00000368547 TNS1Q9HBL0 1735 aaKnown RBP38.43■■■■□ 3.74
ECHS1-201ENST00000368547 MYH16Q9H6N6 1097 aa38.42■■■■□ 3.74
ECHS1-201ENST00000368547 UBR2Q8IWV8 1755 aa38.41■■■■□ 3.74
ECHS1-201ENST00000368547 TTC5Q8N0Z6 440 aa38.41■■■■□ 3.74
ECHS1-201ENST00000368547 FANCIQ9NVI1 1328 aa38.4■■■■□ 3.74
ECHS1-201ENST00000368547 KCPQ6ZWJ8 1503 aa38.36■■■■□ 3.73
ECHS1-201ENST00000368547 SMARCC1Q92922 1105 aaPredicted RBP38.36■■■■□ 3.73
ECHS1-201ENST00000368547 PALLDQ8WX93 1383 aa38.36■■■■□ 3.73
ECHS1-201ENST00000368547 TRMT2AQ8IZ69 625 aaKnown RBP38.35■■■■□ 3.73
ECHS1-201ENST00000368547 PTCD1O75127 700 aaKnown RBP38.34■■■■□ 3.73
ECHS1-201ENST00000368547 EIF4A1P60842 406 aaKnown RBP38.34■■■■□ 3.73
ECHS1-201ENST00000368547 ZNF496Q96IT1 587 aaPredicted RBP38.34■■■■□ 3.73
ECHS1-201ENST00000368547 APBA3O96018 575 aa38.32■■■■□ 3.73
ECHS1-201ENST00000368547 DUSP27Q5VZP5 1158 aa38.32■■■■□ 3.73
ECHS1-201ENST00000368547 LY75O60449 1722 aa38.32■■■■□ 3.72
ECHS1-201ENST00000368547 FMNL2Q96PY5 1086 aa38.3■■■■□ 3.72
ECHS1-201ENST00000368547 RBM42Q9BTD8 480 aaKnown RBP38.3■■■■□ 3.72
ECHS1-201ENST00000368547 KRT24Q2M2I5 525 aa38.29■■■■□ 3.72
ECHS1-201ENST00000368547 SOCS7O14512 581 aa38.27■■■■□ 3.72
ECHS1-201ENST00000368547 EXOSC9Q06265 439 aaKnown RBP38.27■■■■□ 3.72
ECHS1-201ENST00000368547 HEG1Q9ULI3 1381 aa38.26■■■■□ 3.72
ECHS1-201ENST00000368547 SF3B2Q13435 895 aaKnown RBP38.26■■■■□ 3.71
ECHS1-201ENST00000368547 LOC102724428A0A0B4J2F2 783 aa38.25■■■■□ 3.71
ECHS1-201ENST00000368547 SIK1P57059 783 aa38.25■■■■□ 3.71
ECHS1-201ENST00000368547 C8orf58Q8NAV2 365 aa38.25■■■■□ 3.71
ECHS1-201ENST00000368547 SLC4A9Q96Q91 983 aa38.24■■■■□ 3.71
ECHS1-201ENST00000368547 C5P01031 1676 aa38.24■■■■□ 3.71
ECHS1-201ENST00000368547 PLSCR1O15162 318 aa38.23■■■■□ 3.71
ECHS1-201ENST00000368547 CCDC125Q86Z20 511 aa38.23■■■■□ 3.71
ECHS1-201ENST00000368547 ZNF831Q5JPB2 1677 aa38.22■■■■□ 3.71
ECHS1-201ENST00000368547 RGPD3A6NKT7 1758 aaPredicted RBP38.22■■■■□ 3.71
ECHS1-201ENST00000368547 RGPD4Q7Z3J3 1758 aa38.22■■■■□ 3.71
ECHS1-201ENST00000368547 ELL2O00472 640 aaPredicted RBP38.22■■■■□ 3.71
ECHS1-201ENST00000368547 GIGYF1O75420 1035 aaPredicted RBP38.22■■■■□ 3.71
ECHS1-201ENST00000368547 VSIG10Q8N0Z9 540 aa38.21■■■■□ 3.71
ECHS1-201ENST00000368547 TSPYL6Q8N831 410 aa38.21■■■■□ 3.71
ECHS1-201ENST00000368547 TJP1Q07157 1748 aa38.21■■■■□ 3.71
ECHS1-201ENST00000368547 PRAMEF22A3QJZ6 481 aa38.2■■■■□ 3.71
ECHS1-201ENST00000368547 SNRPA1P09661 255 aaKnown RBP38.2■■■■□ 3.71
ECHS1-201ENST00000368547 ATP6V1AP38606 617 aa38.2■■■■□ 3.7
ECHS1-201ENST00000368547 CICQ96RK0 1608 aaPredicted RBP38.18■■■■□ 3.7
ECHS1-201ENST00000368547 KCNQ4P56696 695 aa38.18■■■■□ 3.7
ECHS1-201ENST00000368547 UPF1Q92900 1129 aaKnown RBP eCLIP38.18■■■■□ 3.73e-14■■■■■ 31.8
ECHS1-201ENST00000368547 CCNL1Q9UK58 526 aaPredicted RBP38.18■■■■□ 3.7
ECHS1-201ENST00000368547 LAMB4A4D0S4 1761 aa38.17■■■■□ 3.7
ECHS1-201ENST00000368547 TWISTNBQ3B726 338 aaPredicted RBP38.17■■■■□ 3.7
ECHS1-201ENST00000368547 BAG6P46379 1132 aa38.16■■■■□ 3.7
ECHS1-201ENST00000368547 EN1Q05925 392 aaPredicted RBP38.15■■■■□ 3.7
ECHS1-201ENST00000368547 TXNRD1Q16881 649 aa38.15■■■■□ 3.7
ECHS1-201ENST00000368547 DNAJC10Q8IXB1 793 aa38.15■■■■□ 3.7
ECHS1-201ENST00000368547 ITPK1Q13572 414 aa38.14■■■■□ 3.7
ECHS1-201ENST00000368547 PROM2Q8N271 834 aa38.14■■■■□ 3.7
ECHS1-201ENST00000368547 TAF1LQ8IZX4 1826 aa38.14■■■■□ 3.7
ECHS1-201ENST00000368547 HOXB7P09629 217 aa38.13■■■■□ 3.69
ECHS1-201ENST00000368547 DEFB132Q7Z7B7 95 aa38.13■■■■□ 3.69
ECHS1-201ENST00000368547 USP16Q9Y5T5 823 aa38.13■■■■□ 3.69
ECHS1-201ENST00000368547 COL5A3P25940 1745 aaPredicted RBP38.12■■■■□ 3.69
ECHS1-201ENST00000368547 SLC27A3Q5K4L6 730 aa38.12■■■■□ 3.69
ECHS1-201ENST00000368547 CAMKK2Q96RR4 588 aa38.12■■■■□ 3.69
ECHS1-201ENST00000368547 TEX13AQ9BXU3 409 aaPredicted RBP38.12■■■■□ 3.69
ECHS1-201ENST00000368547 LRRC4BQ9NT99 713 aa38.12■■■■□ 3.69
ECHS1-201ENST00000368547 SOS1Q07889 1333 aaPredicted RBP38.11■■■■□ 3.69
ECHS1-201ENST00000368547 VAMP4O75379 141 aa38.11■■■■□ 3.69
ECHS1-201ENST00000368547 EZH2Q15910 746 aaKnown RBP38.1■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms