RNA–Protein interactions for RNA: ENST00000349995.9

COG3-201, Transcript of component of oligomeric golgi complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COG3, Length 4,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG3-201ENST00000349995 CCDC9Q9Y3X0 531 aaKnown RBP17.85■□□□□ 0.45
COG3-201ENST00000349995 GIMAP6Q6P9H5 292 aa17.85■□□□□ 0.45
COG3-201ENST00000349995 CFAP65Q6ZU64 1925 aaKnown RBP17.85■□□□□ 0.45
COG3-201ENST00000349995 NFE2L2Q16236 605 aa17.84■□□□□ 0.45
COG3-201ENST00000349995 LRRFIP2Q9Y608 721 aaKnown RBP17.84■□□□□ 0.45
COG3-201ENST00000349995 ABCA8O94911 1581 aa17.84■□□□□ 0.45
COG3-201ENST00000349995 SLC4A2P04920 1241 aa17.84■□□□□ 0.45
COG3-201ENST00000349995 TICAM2Q86XR7 235 aa17.84■□□□□ 0.45
COG3-201ENST00000349995 TMEM57Q8N5G2 664 aa17.84■□□□□ 0.45
COG3-201ENST00000349995 CAGE1Q8TC20 777 aa17.84■□□□□ 0.45
COG3-201ENST00000349995 PCDHB15Q9Y5E8 787 aa17.84■□□□□ 0.45
COG3-201ENST00000349995 TTC31Q49AM3 519 aaPredicted RBP17.84■□□□□ 0.45
COG3-201ENST00000349995 KIF2AO00139 706 aaPredicted RBP17.83■□□□□ 0.45
COG3-201ENST00000349995 CTR9Q6PD62 1173 aa17.83■□□□□ 0.45
COG3-201ENST00000349995 NLRP2Q9NX02 1062 aa17.83■□□□□ 0.45
COG3-201ENST00000349995 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.83■□□□□ 0.457e-7■■■■■ 29.7
COG3-201ENST00000349995 C9orf78Q9NZ63 289 aaPredicted RBP17.83■□□□□ 0.44
COG3-201ENST00000349995 MCM10Q7L590 875 aa17.83■□□□□ 0.44
COG3-201ENST00000349995 ZNF397Q8NF99 534 aaPredicted RBP17.83■□□□□ 0.44
COG3-201ENST00000349995 NKTRP30414 1462 aaKnown RBP17.83■□□□□ 0.44
COG3-201ENST00000349995 RUFY2Q8WXA3 655 aa17.82■□□□□ 0.44
COG3-201ENST00000349995 ZNF428Q96B54 188 aa17.82■□□□□ 0.44
COG3-201ENST00000349995 PLEKHH1Q9ULM0 1364 aa17.82■□□□□ 0.44
COG3-201ENST00000349995 SERPINC1P01008 464 aa17.82■□□□□ 0.44
COG3-201ENST00000349995 LRPPRCP42704 1394 aaKnown RBP17.82■□□□□ 0.44
COG3-201ENST00000349995 ZBTB22O15209 634 aa17.82■□□□□ 0.44
COG3-201ENST00000349995 UVSSAQ2YD98 709 aa17.82■□□□□ 0.44
COG3-201ENST00000349995 KRBA2Q6ZNG9 492 aa17.82■□□□□ 0.44
COG3-201ENST00000349995 SPINK5Q9NQ38 1064 aaPredicted RBP17.82■□□□□ 0.44
COG3-201ENST00000349995 AMOTL2Q9Y2J4 779 aa17.81■□□□□ 0.44
COG3-201ENST00000349995 SFPQP23246 707 aaKnown RBP eCLIP17.81■□□□□ 0.44
COG3-201ENST00000349995 PROSER2Q86WR7 435 aaPredicted RBP17.81■□□□□ 0.44
COG3-201ENST00000349995 HDAC5Q9UQL6 1122 aa17.81■□□□□ 0.44
COG3-201ENST00000349995 ZNF500O60304 480 aaPredicted RBP17.81■□□□□ 0.44
COG3-201ENST00000349995 LARP1BQ659C4 914 aaKnown RBP17.81■□□□□ 0.44
COG3-201ENST00000349995 ASXL1Q8IXJ9 1541 aa17.81■□□□□ 0.44
COG3-201ENST00000349995 AIMP1Q12904 312 aaKnown RBP17.8■□□□□ 0.44
COG3-201ENST00000349995 BANK1Q8NDB2 785 aa17.8■□□□□ 0.44
COG3-201ENST00000349995 RASSF8Q8NHQ8 419 aa17.8■□□□□ 0.44
COG3-201ENST00000349995 ZSWIM4Q9H7M6 989 aa17.8■□□□□ 0.44
COG3-201ENST00000349995 NINLQ9Y2I6 1382 aa17.8■□□□□ 0.44
COG3-201ENST00000349995 SMC5Q8IY18 1101 aa17.8■□□□□ 0.44
COG3-201ENST00000349995 MICALL1Q8N3F8 863 aa17.8■□□□□ 0.44
COG3-201ENST00000349995 SRRTQ9BXP5 876 aaKnown RBP17.8■□□□□ 0.44
COG3-201ENST00000349995 LRRCC1Q9C099 1032 aa17.8■□□□□ 0.44
COG3-201ENST00000349995 COL17A1Q9UMD9 1497 aaPredicted RBP17.8■□□□□ 0.44
COG3-201ENST00000349995 GPRASP1Q5JY77 1395 aa17.8■□□□□ 0.44
COG3-201ENST00000349995 TBC1D9Q6ZT07 1266 aa17.8■□□□□ 0.44
COG3-201ENST00000349995 ZRANB1Q9UGI0 708 aa17.8■□□□□ 0.44
COG3-201ENST00000349995 PPP1R9BQ96SB3 815 aa17.79■□□□□ 0.44
COG3-201ENST00000349995 CLGNO14967 610 aa17.79■□□□□ 0.44
COG3-201ENST00000349995 CAPN2P17655 700 aa17.79■□□□□ 0.44
COG3-201ENST00000349995 PIBF1Q8WXW3 757 aa17.79■□□□□ 0.44
COG3-201ENST00000349995 PDCP20941 246 aa17.79■□□□□ 0.44
COG3-201ENST00000349995 SPATA32Q96LK8 384 aa17.79■□□□□ 0.44
COG3-201ENST00000349995 ATF3P18847 181 aa17.78■□□□□ 0.44
COG3-201ENST00000349995 PTGS1P23219 599 aa17.78■□□□□ 0.44
COG3-201ENST00000349995 RAPGEF4Q8WZA2 1011 aa17.78■□□□□ 0.44
COG3-201ENST00000349995 RNF123Q5XPI4 1314 aa17.78■□□□□ 0.44
COG3-201ENST00000349995 SNW1Q13573 536 aaKnown RBP17.78■□□□□ 0.44
COG3-201ENST00000349995 NCKAP5LQ9HCH0 1330 aa17.78■□□□□ 0.44
COG3-201ENST00000349995 MCM6Q14566 821 aa17.78■□□□□ 0.44
COG3-201ENST00000349995 FAM83GA6ND36 823 aa17.77■□□□□ 0.44
COG3-201ENST00000349995 JAKMIP3Q5VZ66 844 aa17.77■□□□□ 0.44
COG3-201ENST00000349995 BRPF1P55201 1214 aaPredicted RBP17.77■□□□□ 0.44
COG3-201ENST00000349995 ANKLE2Q86XL3 938 aa17.77■□□□□ 0.44
COG3-201ENST00000349995 PCMTD1Q96MG8 357 aaPredicted RBP17.77■□□□□ 0.44
COG3-201ENST00000349995 LARP6Q9BRS8 491 aaKnown RBP17.77■□□□□ 0.43
COG3-201ENST00000349995 TNNQ9UQP3 1299 aa17.76■□□□□ 0.43
COG3-201ENST00000349995 SMTNL1A8MU46 457 aa17.76■□□□□ 0.43
COG3-201ENST00000349995 SLU7O95391 586 aaKnown RBP17.76■□□□□ 0.43
COG3-201ENST00000349995 TRIM27P14373 513 aa17.76■□□□□ 0.43
COG3-201ENST00000349995 CEP57L1Q8IYX8 460 aa17.76■□□□□ 0.43
COG3-201ENST00000349995 TTC5Q8N0Z6 440 aa17.76■□□□□ 0.43
COG3-201ENST00000349995 SHTN1A0MZ66 631 aa17.76■□□□□ 0.43
COG3-201ENST00000349995 STK3Q13188 491 aa17.76■□□□□ 0.43
COG3-201ENST00000349995 ATP7AQ04656 1500 aa17.76■□□□□ 0.43
COG3-201ENST00000349995 OLFM4Q6UX06 510 aa17.76■□□□□ 0.43
COG3-201ENST00000349995 RRP12Q5JTH9 1297 aaKnown RBP17.75■□□□□ 0.43
COG3-201ENST00000349995 SNX21Q969T3 373 aa17.75■□□□□ 0.43
COG3-201ENST00000349995 SAMD9LQ8IVG5 1584 aa17.75■□□□□ 0.43
COG3-201ENST00000349995 ZNF165P49910 485 aa17.75■□□□□ 0.43
COG3-201ENST00000349995 SYNE3Q6ZMZ3 975 aa17.75■□□□□ 0.43
COG3-201ENST00000349995 ANKRD36BQ8N2N9 1353 aa17.75■□□□□ 0.43
COG3-201ENST00000349995 ARHGAP29Q52LW3 1261 aa17.74■□□□□ 0.43
COG3-201ENST00000349995 CRACR2AQ9BSW2 395 aa17.74■□□□□ 0.43
COG3-201ENST00000349995 ERCC6L2Q5T890 1561 aa17.74■□□□□ 0.43
COG3-201ENST00000349995 SKILP12757 684 aa17.74■□□□□ 0.43
COG3-201ENST00000349995 ME1P48163 572 aa17.74■□□□□ 0.43
COG3-201ENST00000349995 EVA1CP58658 441 aa17.74■□□□□ 0.43
COG3-201ENST00000349995 CCDC91Q7Z6B0 441 aa17.74■□□□□ 0.43
COG3-201ENST00000349995 A0A1B0GUL7 405 aa17.74■□□□□ 0.43
COG3-201ENST00000349995 UBTFL1P0CB47 393 aaPredicted RBP17.74■□□□□ 0.43
COG3-201ENST00000349995 RNF187Q5TA31 235 aaPredicted RBP17.74■□□□□ 0.43
COG3-201ENST00000349995 HDGFL1Q5TGJ6 251 aa17.74■□□□□ 0.43
COG3-201ENST00000349995 CCDC30Q5VVM6 783 aa17.74■□□□□ 0.43
COG3-201ENST00000349995 DMRT2Q9Y5R5 561 aa17.74■□□□□ 0.43
COG3-201ENST00000349995 ARFGAP3Q9NP61 516 aa17.73■□□□□ 0.43
COG3-201ENST00000349995 IVLP07476 585 aa17.73■□□□□ 0.43
COG3-201ENST00000349995 NEXNQ0ZGT2 675 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms