RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 CCDC83Q8IWF9 413 aa20.14■□□□□ 0.82
TRAPPC11-201ENST00000334690 AK7Q96M32 723 aa20.14■□□□□ 0.82
TRAPPC11-201ENST00000334690 LIMCH1Q9UPQ0 1083 aa20.14■□□□□ 0.82
TRAPPC11-201ENST00000334690 UNC13AQ9UPW8 1703 aa20.14■□□□□ 0.82
TRAPPC11-201ENST00000334690 IMMTQ16891 758 aaKnown RBP20.14■□□□□ 0.81
TRAPPC11-201ENST00000334690 ERCC4Q92889 916 aaPredicted RBP20.14■□□□□ 0.81
TRAPPC11-201ENST00000334690 XPCQ01831 940 aaPredicted RBP20.14■□□□□ 0.81
TRAPPC11-201ENST00000334690 SSFA2P28290 1259 aa20.14■□□□□ 0.81
TRAPPC11-201ENST00000334690 HYPKQ9NX55 129 aa20.14■□□□□ 0.81
TRAPPC11-201ENST00000334690 MAGEC2Q9UBF1 373 aaPredicted RBP20.14■□□□□ 0.81
TRAPPC11-201ENST00000334690 CDR1P51861 262 aa20.13■□□□□ 0.81
TRAPPC11-201ENST00000334690 EPS15P42566 896 aa20.13■□□□□ 0.81
TRAPPC11-201ENST00000334690 FERMT3Q86UX7 667 aa20.13■□□□□ 0.81
TRAPPC11-201ENST00000334690 AKAP2Q9Y2D5 859 aa20.13■□□□□ 0.81
TRAPPC11-201ENST00000334690 CBFA2T2O43439 604 aa20.13■□□□□ 0.81
TRAPPC11-201ENST00000334690 NUCB1Q02818 461 aa20.13■□□□□ 0.81
TRAPPC11-201ENST00000334690 BOLA2Q9H3K6 86 aa20.13■□□□□ 0.81
TRAPPC11-201ENST00000334690 ARHGEF12Q9NZN5 1544 aa20.12■□□□□ 0.81
TRAPPC11-201ENST00000334690 MPNDQ8N594 471 aa20.12■□□□□ 0.81
TRAPPC11-201ENST00000334690 NOL7Q9UMY1 257 aaKnown RBP20.12■□□□□ 0.81
TRAPPC11-201ENST00000334690 ECHDC1Q9NTX5 307 aa20.12■□□□□ 0.81
TRAPPC11-201ENST00000334690 STARD3NLO95772 234 aa20.11■□□□□ 0.81
TRAPPC11-201ENST00000334690 CCDC183Q5T5S1 534 aa20.11■□□□□ 0.81
TRAPPC11-201ENST00000334690 CDK5RAP3Q96JB5 506 aa20.11■□□□□ 0.81
TRAPPC11-201ENST00000334690 UBAC1Q9BSL1 405 aa20.11■□□□□ 0.81
TRAPPC11-201ENST00000334690 TTC22Q5TAA0 569 aa20.11■□□□□ 0.81
TRAPPC11-201ENST00000334690 MEX3CQ5U5Q3 659 aaKnown RBP20.11■□□□□ 0.81
TRAPPC11-201ENST00000334690 WASF1Q92558 559 aa20.11■□□□□ 0.81
TRAPPC11-201ENST00000334690 HMGB1P09429 215 aaKnown RBP20.11■□□□□ 0.81
TRAPPC11-201ENST00000334690 PIK3C2GO75747 1445 aa20.11■□□□□ 0.81
TRAPPC11-201ENST00000334690 DDX11Q96FC9 970 aa20.1■□□□□ 0.81
TRAPPC11-201ENST00000334690 TDO2P48775 406 aa20.1■□□□□ 0.81
TRAPPC11-201ENST00000334690 PPFIBP1Q86W92 1011 aa20.1■□□□□ 0.81
TRAPPC11-201ENST00000334690 BRPF1P55201 1214 aaPredicted RBP20.1■□□□□ 0.81
TRAPPC11-201ENST00000334690 STIM1Q13586 685 aa20.1■□□□□ 0.81
TRAPPC11-201ENST00000334690 CAGE1Q8TC20 777 aa20.1■□□□□ 0.81
TRAPPC11-201ENST00000334690 ZNHIT6Q9NWK9 470 aaKnown RBP20.1■□□□□ 0.81
TRAPPC11-201ENST00000334690 NUP133Q8WUM0 1156 aa20.09■□□□□ 0.81
TRAPPC11-201ENST00000334690 IDH1O75874 414 aaKnown RBP20.09■□□□□ 0.81
TRAPPC11-201ENST00000334690 FILIP1Q7Z7B0 1213 aa20.09■□□□□ 0.81
TRAPPC11-201ENST00000334690 CFAP43Q8NDM7 1665 aa20.09■□□□□ 0.81
TRAPPC11-201ENST00000334690 PER1O15534 1290 aaPredicted RBP20.09■□□□□ 0.81
TRAPPC11-201ENST00000334690 USHBP1Q8N6Y0 703 aa20.09■□□□□ 0.81
TRAPPC11-201ENST00000334690 SMTNL1A8MU46 457 aa20.08■□□□□ 0.81
TRAPPC11-201ENST00000334690 MPRIPQ6WCQ1 1025 aa20.08■□□□□ 0.81
TRAPPC11-201ENST00000334690 PIK3R4Q99570 1358 aa20.08■□□□□ 0.81
TRAPPC11-201ENST00000334690 FAM83GA6ND36 823 aa20.08■□□□□ 0.8
TRAPPC11-201ENST00000334690 MYD88Q99836 296 aa20.08■□□□□ 0.8
TRAPPC11-201ENST00000334690 SYCP2Q9BX26 1530 aa20.08■□□□□ 0.8
TRAPPC11-201ENST00000334690 TTLL5Q6EMB2 1281 aa20.08■□□□□ 0.8
TRAPPC11-201ENST00000334690 EVI5LQ96CN4 794 aa20.08■□□□□ 0.8
TRAPPC11-201ENST00000334690 ACEP12821 1306 aa20.08■□□□□ 0.8
TRAPPC11-201ENST00000334690 CTTNBP2Q8WZ74 1663 aa20.07■□□□□ 0.8
TRAPPC11-201ENST00000334690 IKQ13123 557 aaPredicted RBP20.07■□□□□ 0.8
TRAPPC11-201ENST00000334690 CCAR1Q8IX12 1150 aaKnown RBP20.07■□□□□ 0.8
TRAPPC11-201ENST00000334690 BCL11BQ9C0K0 894 aaPredicted RBP20.07■□□□□ 0.8
TRAPPC11-201ENST00000334690 RBM10P98175 930 aaKnown RBP20.07■□□□□ 0.8
TRAPPC11-201ENST00000334690 AIDAQ96BJ3 306 aa20.07■□□□□ 0.8
TRAPPC11-201ENST00000334690 SHANK2Q9UPX8 1470 aa20.07■□□□□ 0.8
TRAPPC11-201ENST00000334690 IFIT1P09914 478 aaKnown RBP20.07■□□□□ 0.8
TRAPPC11-201ENST00000334690 METTL24Q5JXM2 366 aa20.07■□□□□ 0.8
TRAPPC11-201ENST00000334690 FOXO3O43524 673 aa20.07■□□□□ 0.8
TRAPPC11-201ENST00000334690 PTCD1O75127 700 aaKnown RBP20.06■□□□□ 0.8
TRAPPC11-201ENST00000334690 BAG4O95429 457 aaKnown RBP20.06■□□□□ 0.8
TRAPPC11-201ENST00000334690 CCDC8Q9H0W5 538 aaPredicted RBP20.06■□□□□ 0.8
TRAPPC11-201ENST00000334690 EIF2AK4Q9P2K8 1649 aaKnown RBP20.06■□□□□ 0.8
TRAPPC11-201ENST00000334690 UQCRHLA0A096LP55 91 aa20.06■□□□□ 0.8
TRAPPC11-201ENST00000334690 UQCRHP07919 91 aa20.06■□□□□ 0.8
TRAPPC11-201ENST00000334690 LRP2BPQ9P2M1 347 aa20.06■□□□□ 0.8
TRAPPC11-201ENST00000334690 KLHL40Q2TBA0 621 aa20.06■□□□□ 0.8
TRAPPC11-201ENST00000334690 ANKRD44Q8N8A2 993 aa20.06■□□□□ 0.8
TRAPPC11-201ENST00000334690 A2MP01023 1474 aa20.05■□□□□ 0.8
TRAPPC11-201ENST00000334690 CT47A1Q5JQC4 288 aaPredicted RBP20.05■□□□□ 0.8
TRAPPC11-201ENST00000334690 IGHMBP2P38935 993 aaKnown RBP20.05■□□□□ 0.8
TRAPPC11-201ENST00000334690 PPP1R42Q7Z4L9 355 aa20.05■□□□□ 0.8
TRAPPC11-201ENST00000334690 WDR62O43379 1518 aa20.04■□□□□ 0.8
TRAPPC11-201ENST00000334690 C8orf34Q49A92 452 aa20.04■□□□□ 0.8
TRAPPC11-201ENST00000334690 PI4KAP2A4QPH2 592 aa20.03■□□□□ 0.8
TRAPPC11-201ENST00000334690 PI4KAP1Q8N8J0 262 aa20.03■□□□□ 0.8
TRAPPC11-201ENST00000334690 CCDC85AQ96PX6 553 aaPredicted RBP20.03■□□□□ 0.8
TRAPPC11-201ENST00000334690 LUC7LQ9NQ29 371 aaKnown RBP20.03■□□□□ 0.8
TRAPPC11-201ENST00000334690 ANO10Q9NW15 660 aa20.03■□□□□ 0.8
TRAPPC11-201ENST00000334690 TTC21AQ8NDW8 1320 aa20.03■□□□□ 0.8
TRAPPC11-201ENST00000334690 SOGA3Q5TF21 947 aa20.03■□□□□ 0.8
TRAPPC11-201ENST00000334690 RAI14Q9P0K7 980 aa20.03■□□□□ 0.8
TRAPPC11-201ENST00000334690 A0A087WZG4 1122 aa20.03■□□□□ 0.8
TRAPPC11-201ENST00000334690 SAMD1Q6SPF0 538 aaPredicted RBP20.03■□□□□ 0.8
TRAPPC11-201ENST00000334690 CCDC66A2RUB6 948 aa20.02■□□□□ 0.8
TRAPPC11-201ENST00000334690 KIF2AO00139 706 aaPredicted RBP20.02■□□□□ 0.8
TRAPPC11-201ENST00000334690 CTAGE5O15320 804 aa20.02■□□□□ 0.8
TRAPPC11-201ENST00000334690 RRP9O43818 475 aaKnown RBP20.02■□□□□ 0.8
TRAPPC11-201ENST00000334690 MEIS3Q99687 375 aa20.02■□□□□ 0.8
TRAPPC11-201ENST00000334690 CCDC196A0A1B0GTZ2 297 aa20.02■□□□□ 0.8
TRAPPC11-201ENST00000334690 SDSP20132 328 aa20.02■□□□□ 0.8
TRAPPC11-201ENST00000334690 DDX19AQ9NUU7 478 aaKnown RBP20.02■□□□□ 0.8
TRAPPC11-201ENST00000334690 CEP131Q9UPN4 1083 aa20.02■□□□□ 0.8
TRAPPC11-201ENST00000334690 STX6O43752 255 aa20.01■□□□□ 0.79
TRAPPC11-201ENST00000334690 IFIT5Q13325 482 aaKnown RBP20.01■□□□□ 0.79
TRAPPC11-201ENST00000334690 HSP90AB2PQ58FF8 381 aa20.01■□□□□ 0.79
TRAPPC11-201ENST00000334690 KRT18P05783 430 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms