RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 PRR36Q9H6K5 1346 aa16.66■□□□□ 0.26
SYNE3-201ENST00000334258 USP32Q8NFA0 1604 aa16.66■□□□□ 0.26
SYNE3-201ENST00000334258 RPAP2Q8IXW5 612 aaPredicted RBP16.66■□□□□ 0.26
SYNE3-201ENST00000334258 COL3A1P02461 1466 aaPredicted RBP16.65■□□□□ 0.26
SYNE3-201ENST00000334258 ZFYVE9O95405 1425 aa16.65■□□□□ 0.26
SYNE3-201ENST00000334258 JARID2Q92833 1246 aaPredicted RBP16.65■□□□□ 0.26
SYNE3-201ENST00000334258 PHF14O94880 888 aa16.65■□□□□ 0.26
SYNE3-201ENST00000334258 LMOD3Q0VAK6 560 aa16.65■□□□□ 0.26
SYNE3-201ENST00000334258 CEP85Q6P2H3 762 aa16.64■□□□□ 0.25
SYNE3-201ENST00000334258 SMAP1Q8IYB5 467 aaPredicted RBP16.64■□□□□ 0.25
SYNE3-201ENST00000334258 KCNA6P17658 529 aa16.64■□□□□ 0.25
SYNE3-201ENST00000334258 MCCP23508 829 aa16.64■□□□□ 0.25
SYNE3-201ENST00000334258 USP25Q9UHP3 1055 aa16.64■□□□□ 0.25
SYNE3-201ENST00000334258 CCDC61Q9Y6R9 512 aa16.64■□□□□ 0.25
SYNE3-201ENST00000334258 SPATA31D1Q6ZQQ2 1576 aa16.64■□□□□ 0.25
SYNE3-201ENST00000334258 KRT24Q2M2I5 525 aa16.64■□□□□ 0.25
SYNE3-201ENST00000334258 TSHZ3Q63HK5 1081 aa16.64■□□□□ 0.25
SYNE3-201ENST00000334258 SLC4A10Q6U841 1118 aa16.64■□□□□ 0.25
SYNE3-201ENST00000334258 ANO2Q9NQ90 1003 aa16.64■□□□□ 0.25
SYNE3-201ENST00000334258 MEIS3Q99687 375 aa16.63■□□□□ 0.25
SYNE3-201ENST00000334258 THEMISQ8N1K5 641 aaPredicted RBP16.62■□□□□ 0.25
SYNE3-201ENST00000334258 TTC12Q9H892 705 aaPredicted RBP16.62■□□□□ 0.25
SYNE3-201ENST00000334258 PNPLA6Q8IY17 1366 aa16.62■□□□□ 0.25
SYNE3-201ENST00000334258 FAM177BA6PVY3 158 aa16.62■□□□□ 0.25
SYNE3-201ENST00000334258 TRIM6-TRIM34B2RNG4 842 aa16.62■□□□□ 0.25
SYNE3-201ENST00000334258 HMMRO75330 724 aa16.62■□□□□ 0.25
SYNE3-201ENST00000334258 BRD1O95696 1058 aa16.62■□□□□ 0.25
SYNE3-201ENST00000334258 C17orf53Q8N3J3 647 aaPredicted RBP16.62■□□□□ 0.25
SYNE3-201ENST00000334258 RILPL2Q969X0 211 aa16.62■□□□□ 0.25
SYNE3-201ENST00000334258 CCDC94Q9BW85 323 aaPredicted RBP16.62■□□□□ 0.25
SYNE3-201ENST00000334258 UPF3BQ9BZI7 483 aaKnown RBP16.62■□□□□ 0.25
SYNE3-201ENST00000334258 ZNF853P0CG23 659 aa16.62■□□□□ 0.25
SYNE3-201ENST00000334258 MCM2P49736 904 aa16.62■□□□□ 0.25
SYNE3-201ENST00000334258 GADD45BO75293 160 aaPredicted RBP16.61■□□□□ 0.25
SYNE3-201ENST00000334258 NGDNQ8NEJ9 315 aaKnown RBP16.61■□□□□ 0.25
SYNE3-201ENST00000334258 MYRIPQ8NFW9 859 aa16.61■□□□□ 0.25
SYNE3-201ENST00000334258 NOLC1Q14978 699 aaKnown RBP eCLIP16.6■□□□□ 0.25
SYNE3-201ENST00000334258 FAM135BQ49AJ0 1406 aa16.6■□□□□ 0.25
SYNE3-201ENST00000334258 CBX1P83916 185 aa16.6■□□□□ 0.25
SYNE3-201ENST00000334258 ACEP12821 1306 aa16.6■□□□□ 0.25
SYNE3-201ENST00000334258 LRRC7Q96NW7 1537 aa16.6■□□□□ 0.25
SYNE3-201ENST00000334258 HMGN5P82970 282 aaKnown RBP16.6■□□□□ 0.25
SYNE3-201ENST00000334258 PDE1AP54750 535 aa16.59■□□□□ 0.25
SYNE3-201ENST00000334258 USP48Q86UV5 1035 aa16.59■□□□□ 0.25
SYNE3-201ENST00000334258 IPO4Q8TEX9 1081 aaKnown RBP16.59■□□□□ 0.25
SYNE3-201ENST00000334258 CD163L1Q9NR16 1453 aa16.59■□□□□ 0.25
SYNE3-201ENST00000334258 ADCY5O95622 1261 aa16.58■□□□□ 0.25
SYNE3-201ENST00000334258 EXOC6BQ9Y2D4 811 aa16.58■□□□□ 0.25
SYNE3-201ENST00000334258 HAP1P54257 671 aaPredicted RBP16.58■□□□□ 0.24
SYNE3-201ENST00000334258 LMOD2Q6P5Q4 547 aa16.58■□□□□ 0.24
SYNE3-201ENST00000334258 PALD1Q9ULE6 856 aa16.58■□□□□ 0.24
SYNE3-201ENST00000334258 COG3Q96JB2 828 aa16.58■□□□□ 0.24
SYNE3-201ENST00000334258 HCLS1P14317 486 aaPredicted RBP16.57■□□□□ 0.24
SYNE3-201ENST00000334258 FAM184AQ8NB25 1140 aa16.57■□□□□ 0.24
SYNE3-201ENST00000334258 PRIMPOLQ96LW4 560 aa16.57■□□□□ 0.24
SYNE3-201ENST00000334258 PIBF1Q8WXW3 757 aa16.57■□□□□ 0.24
SYNE3-201ENST00000334258 KIF3AQ9Y496 699 aa16.57■□□□□ 0.24
SYNE3-201ENST00000334258 ADAMTS13Q76LX8 1427 aa16.57■□□□□ 0.24
SYNE3-201ENST00000334258 SLC4A2P04920 1241 aa16.57■□□□□ 0.24
SYNE3-201ENST00000334258 IL13P35225 146 aa16.57■□□□□ 0.24
SYNE3-201ENST00000334258 PTPRUQ92729 1446 aa16.56■□□□□ 0.24
SYNE3-201ENST00000334258 LTV1Q96GA3 475 aaPredicted RBP16.56■□□□□ 0.24
SYNE3-201ENST00000334258 ESYT1Q9BSJ8 1104 aa16.56■□□□□ 0.24
SYNE3-201ENST00000334258 MSH6P52701 1360 aa16.56■□□□□ 0.24
SYNE3-201ENST00000334258 REREQ9P2R6 1566 aa16.56■□□□□ 0.24
SYNE3-201ENST00000334258 WDR33Q9C0J8 1336 aaKnown RBP16.55■□□□□ 0.24
SYNE3-201ENST00000334258 MAPK8IP2Q13387 824 aaPredicted RBP16.55■□□□□ 0.24
SYNE3-201ENST00000334258 DNAJC5Q9H3Z4 198 aa16.55■□□□□ 0.24
SYNE3-201ENST00000334258 RTL1A6NKG5 1358 aa16.55■□□□□ 0.24
SYNE3-201ENST00000334258 F6X3S4 739 aa16.55■□□□□ 0.24
SYNE3-201ENST00000334258 PPP4R3BQ5MIZ7 849 aa16.55■□□□□ 0.24
SYNE3-201ENST00000334258 KIF24Q5T7B8 1368 aa16.54■□□□□ 0.24
SYNE3-201ENST00000334258 CHAF1AQ13111 956 aaPredicted RBP16.54■□□□□ 0.24
SYNE3-201ENST00000334258 CUL4AQ13619 759 aa16.54■□□□□ 0.24
SYNE3-201ENST00000334258 MCM10Q7L590 875 aa16.54■□□□□ 0.24
SYNE3-201ENST00000334258 AEBP1Q8IUX7 1158 aa16.54■□□□□ 0.24
SYNE3-201ENST00000334258 INTS4Q96HW7 963 aaKnown RBP16.54■□□□□ 0.24
SYNE3-201ENST00000334258 HSPA2P54652 639 aa16.54■□□□□ 0.24
SYNE3-201ENST00000334258 UVSSAQ2YD98 709 aa16.53■□□□□ 0.24
SYNE3-201ENST00000334258 HSP90AB2PQ58FF8 381 aa16.53■□□□□ 0.24
SYNE3-201ENST00000334258 ATP10DQ9P241 1426 aa16.53■□□□□ 0.24
SYNE3-201ENST00000334258 CCDC183Q5T5S1 534 aa16.53■□□□□ 0.24
SYNE3-201ENST00000334258 CNPY2Q9Y2B0 182 aa16.53■□□□□ 0.24
SYNE3-201ENST00000334258 FIBPO43427 364 aa16.52■□□□□ 0.24
SYNE3-201ENST00000334258 LARP6Q9BRS8 491 aaKnown RBP16.52■□□□□ 0.24
SYNE3-201ENST00000334258 MIS18AQ9NYP9 233 aa16.52■□□□□ 0.23
SYNE3-201ENST00000334258 SPDYE4A6NLX3 237 aa16.51■□□□□ 0.23
SYNE3-201ENST00000334258 ZNF710Q8N1W2 664 aa16.51■□□□□ 0.23
SYNE3-201ENST00000334258 SPC24Q8NBT2 197 aa16.51■□□□□ 0.23
SYNE3-201ENST00000334258 NRXN3Q9Y4C0 1643 aa16.51■□□□□ 0.23
SYNE3-201ENST00000334258 MX1P20591 662 aa16.51■□□□□ 0.23
SYNE3-201ENST00000334258 SULT6B1Q6IMI4 303 aa16.51■□□□□ 0.23
SYNE3-201ENST00000334258 LRRCC1Q9C099 1032 aa16.51■□□□□ 0.23
SYNE3-201ENST00000334258 SRCIN1Q9C0H9 1055 aa16.51■□□□□ 0.23
SYNE3-201ENST00000334258 DMTNQ08495 405 aa16.51■□□□□ 0.23
SYNE3-201ENST00000334258 ANKLE2Q86XL3 938 aa16.51■□□□□ 0.23
SYNE3-201ENST00000334258 ZSCAN20P17040 1043 aaPredicted RBP16.5■□□□□ 0.23
SYNE3-201ENST00000334258 CHMLP26374 656 aa16.5■□□□□ 0.23
SYNE3-201ENST00000334258 TMEM51Q9NW97 253 aa16.5■□□□□ 0.23
SYNE3-201ENST00000334258 ANAPC15P60006 121 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms