RNA–Protein interactions for RNA: ENST00000309890.11

ATP2A3-201, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 5 BASIC

Gene ATP2A3, Length 4,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-201ENST00000309890 PDCL2Q8N4E4 241 aa21.15■□□□□ 0.98
ATP2A3-201ENST00000309890 DDX11Q96FC9 970 aa21.15■□□□□ 0.98
ATP2A3-201ENST00000309890 TXLNAP40222 546 aa21.15■□□□□ 0.98
ATP2A3-201ENST00000309890 ZSCAN25Q6NSZ9 544 aa21.15■□□□□ 0.98
ATP2A3-201ENST00000309890 SMC5Q8IY18 1101 aa21.15■□□□□ 0.98
ATP2A3-201ENST00000309890 WDR62O43379 1518 aa21.15■□□□□ 0.98
ATP2A3-201ENST00000309890 TEX14Q8IWB6 1497 aa21.14■□□□□ 0.98
ATP2A3-201ENST00000309890 TTC21BQ7Z4L5 1316 aa21.14■□□□□ 0.98
ATP2A3-201ENST00000309890 CCDC57Q2TAC2 916 aa21.14■□□□□ 0.98
ATP2A3-201ENST00000309890 DNAAF4Q8WXU2 420 aa21.14■□□□□ 0.98
ATP2A3-201ENST00000309890 COL17A1Q9UMD9 1497 aaPredicted RBP21.14■□□□□ 0.98
ATP2A3-201ENST00000309890 PUS7Q96PZ0 661 aaKnown RBP21.14■□□□□ 0.97
ATP2A3-201ENST00000309890 SHANK2Q9UPX8 1470 aa21.14■□□□□ 0.97
ATP2A3-201ENST00000309890 NAP1L1P55209 391 aaKnown RBP21.14■□□□□ 0.97
ATP2A3-201ENST00000309890 CAMK4Q16566 473 aa21.13■□□□□ 0.97
ATP2A3-201ENST00000309890 PROSER2Q86WR7 435 aaPredicted RBP21.13■□□□□ 0.97
ATP2A3-201ENST00000309890 PDCL3Q9H2J4 239 aa21.13■□□□□ 0.97
ATP2A3-201ENST00000309890 KIF2AO00139 706 aaPredicted RBP21.13■□□□□ 0.97
ATP2A3-201ENST00000309890 KCNH5Q8NCM2 988 aa21.13■□□□□ 0.97
ATP2A3-201ENST00000309890 NACAP1Q9BZK3 213 aa21.13■□□□□ 0.97
ATP2A3-201ENST00000309890 SDSP20132 328 aa21.13■□□□□ 0.97
ATP2A3-201ENST00000309890 FKBP4Q02790 459 aaKnown RBP eCLIP21.13■□□□□ 0.97
ATP2A3-201ENST00000309890 TTLL5Q6EMB2 1281 aa21.13■□□□□ 0.97
ATP2A3-201ENST00000309890 LARP1Q6PKG0 1096 aaKnown RBP21.13■□□□□ 0.97
ATP2A3-201ENST00000309890 ANKRD44Q8N8A2 993 aa21.13■□□□□ 0.97
ATP2A3-201ENST00000309890 SMTNL1A8MU46 457 aa21.12■□□□□ 0.97
ATP2A3-201ENST00000309890 CAGE1Q8TC20 777 aa21.12■□□□□ 0.97
ATP2A3-201ENST00000309890 PPFIBP1Q86W92 1011 aa21.12■□□□□ 0.97
ATP2A3-201ENST00000309890 TNNQ9UQP3 1299 aa21.12■□□□□ 0.97
ATP2A3-201ENST00000309890 PLCH2O75038 1416 aa21.12■□□□□ 0.97
ATP2A3-201ENST00000309890 ZSCAN23Q3MJ62 389 aa21.12■□□□□ 0.97
ATP2A3-201ENST00000309890 GDPD2Q9HCC8 539 aa21.12■□□□□ 0.97
ATP2A3-201ENST00000309890 INSRP06213 1382 aa21.11■□□□□ 0.97
ATP2A3-201ENST00000309890 FAM83GA6ND36 823 aa21.11■□□□□ 0.97
ATP2A3-201ENST00000309890 STX6O43752 255 aa21.11■□□□□ 0.97
ATP2A3-201ENST00000309890 BOLA2Q9H3K6 86 aa21.11■□□□□ 0.97
ATP2A3-201ENST00000309890 U3KPZ7 1027 aaPredicted RBP21.11■□□□□ 0.97
ATP2A3-201ENST00000309890 BRPF1P55201 1214 aaPredicted RBP21.11■□□□□ 0.97
ATP2A3-201ENST00000309890 ECHDC1Q9NTX5 307 aa21.11■□□□□ 0.97
ATP2A3-201ENST00000309890 SYCP2Q9BX26 1530 aa21.11■□□□□ 0.97
ATP2A3-201ENST00000309890 RAD21O60216 631 aa21.1■□□□□ 0.97
ATP2A3-201ENST00000309890 CDR1P51861 262 aa21.1■□□□□ 0.97
ATP2A3-201ENST00000309890 UVSSAQ2YD98 709 aa21.1■□□□□ 0.97
ATP2A3-201ENST00000309890 TMX3Q96JJ7 454 aa21.1■□□□□ 0.97
ATP2A3-201ENST00000309890 NPC1L1Q9UHC9 1359 aa21.1■□□□□ 0.97
ATP2A3-201ENST00000309890 PANK2Q9BZ23 570 aa21.1■□□□□ 0.97
ATP2A3-201ENST00000309890 ANO10Q9NW15 660 aa21.1■□□□□ 0.97
ATP2A3-201ENST00000309890 DDX19AQ9NUU7 478 aaKnown RBP21.1■□□□□ 0.97
ATP2A3-201ENST00000309890 SEC24BO95487 1268 aa21.1■□□□□ 0.97
ATP2A3-201ENST00000309890 KDM2BQ8NHM5 1336 aa21.09■□□□□ 0.97
ATP2A3-201ENST00000309890 OFD1O75665 1012 aa21.09■□□□□ 0.97
ATP2A3-201ENST00000309890 MRPL50Q8N5N7 158 aaKnown RBP21.09■□□□□ 0.97
ATP2A3-201ENST00000309890 CARD14Q9BXL6 1004 aa21.09■□□□□ 0.97
ATP2A3-201ENST00000309890 DNMT1P26358 1616 aaKnown RBP21.09■□□□□ 0.97
ATP2A3-201ENST00000309890 LRSAM1Q6UWE0 723 aa21.09■□□□□ 0.97
ATP2A3-201ENST00000309890 ZBTB40Q9NUA8 1239 aa21.09■□□□□ 0.97
ATP2A3-201ENST00000309890 DBF4Q9UBU7 674 aaPredicted RBP21.09■□□□□ 0.97
ATP2A3-201ENST00000309890 CCDC69A6NI79 296 aa21.08■□□□□ 0.97
ATP2A3-201ENST00000309890 UBE2HP62256 183 aa21.08■□□□□ 0.97
ATP2A3-201ENST00000309890 RBM27Q9P2N5 1060 aaKnown RBP21.08■□□□□ 0.97
ATP2A3-201ENST00000309890 MAGEC2Q9UBF1 373 aaPredicted RBP21.08■□□□□ 0.97
ATP2A3-201ENST00000309890 FBXO31Q5XUX0 539 aaPredicted RBP21.08■□□□□ 0.97
ATP2A3-201ENST00000309890 SPINK5Q9NQ38 1064 aaPredicted RBP21.08■□□□□ 0.97
ATP2A3-201ENST00000309890 SLC3A2P08195 630 aaKnown RBP21.08■□□□□ 0.96
ATP2A3-201ENST00000309890 DDX54Q8TDD1 881 aaKnown RBP21.08■□□□□ 0.96
ATP2A3-201ENST00000309890 RBM33Q96EV2 1170 aaKnown RBP21.08■□□□□ 0.96
ATP2A3-201ENST00000309890 MEIS3Q99687 375 aa21.08■□□□□ 0.96
ATP2A3-201ENST00000309890 RBM42Q9BTD8 480 aaKnown RBP21.08■□□□□ 0.96
ATP2A3-201ENST00000309890 TRIM34Q9BYJ4 488 aa21.08■□□□□ 0.96
ATP2A3-201ENST00000309890 ANAPC15P60006 121 aa21.08■□□□□ 0.96
ATP2A3-201ENST00000309890 PTPN14Q15678 1187 aa21.08■□□□□ 0.96
ATP2A3-201ENST00000309890 IMMTQ16891 758 aaKnown RBP21.08■□□□□ 0.96
ATP2A3-201ENST00000309890 AMOTQ4VCS5 1084 aa21.08■□□□□ 0.96
ATP2A3-201ENST00000309890 CTAGE5O15320 804 aa21.07■□□□□ 0.96
ATP2A3-201ENST00000309890 EVI5LQ96CN4 794 aa21.07■□□□□ 0.96
ATP2A3-201ENST00000309890 HMGB1P09429 215 aaKnown RBP21.07■□□□□ 0.96
ATP2A3-201ENST00000309890 SFPQP23246 707 aaKnown RBP eCLIP21.07■□□□□ 0.96
ATP2A3-201ENST00000309890 PDE1AP54750 535 aa21.07■□□□□ 0.96
ATP2A3-201ENST00000309890 RAB3GAP1Q15042 981 aa21.07■□□□□ 0.96
ATP2A3-201ENST00000309890 ZNHIT6Q9NWK9 470 aaKnown RBP21.06■□□□□ 0.96
ATP2A3-201ENST00000309890 ADCY5O95622 1261 aa21.06■□□□□ 0.96
ATP2A3-201ENST00000309890 GNL3LQ9NVN8 582 aaKnown RBP21.06■□□□□ 0.96
ATP2A3-201ENST00000309890 KIAA0556O60303 1618 aa21.05■□□□□ 0.96
ATP2A3-201ENST00000309890 ZMYM4Q5VZL5 1548 aa21.05■□□□□ 0.96
ATP2A3-201ENST00000309890 PPP1R42Q7Z4L9 355 aa21.05■□□□□ 0.96
ATP2A3-201ENST00000309890 CCDC8Q9H0W5 538 aaPredicted RBP21.05■□□□□ 0.96
ATP2A3-201ENST00000309890 PIK3R4Q99570 1358 aa21.05■□□□□ 0.96
ATP2A3-201ENST00000309890 UBXN4Q92575 508 aa21.05■□□□□ 0.96
ATP2A3-201ENST00000309890 GJB2P29033 226 aa21.05■□□□□ 0.96
ATP2A3-201ENST00000309890 ERLIN1O75477 346 aa21.04■□□□□ 0.96
ATP2A3-201ENST00000309890 FAM177A1Q8N128 213 aaPredicted RBP21.04■□□□□ 0.96
ATP2A3-201ENST00000309890 LEKR1Q6ZMV7 388 aa21.04■□□□□ 0.96
ATP2A3-201ENST00000309890 FAM177BA6PVY3 158 aa21.04■□□□□ 0.96
ATP2A3-201ENST00000309890 CFAP100Q494V2 611 aa21.04■□□□□ 0.96
ATP2A3-201ENST00000309890 TSHZ3Q63HK5 1081 aa21.04■□□□□ 0.96
ATP2A3-201ENST00000309890 CKAP2LQ8IYA6 745 aa21.04■□□□□ 0.96
ATP2A3-201ENST00000309890 KIF18AQ8NI77 898 aa21.04■□□□□ 0.96
ATP2A3-201ENST00000309890 NOL7Q9UMY1 257 aaKnown RBP21.04■□□□□ 0.96
ATP2A3-201ENST00000309890 ANKLE2Q86XL3 938 aa21.04■□□□□ 0.96
ATP2A3-201ENST00000309890 C8orf58Q8NAV2 365 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms