RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 PHAXQ9H814 394 aaKnown RBP19.48■□□□□ 0.71
PDZRN3-201ENST00000263666 PHF8Q9UPP1 1060 aa19.48■□□□□ 0.71
PDZRN3-201ENST00000263666 PLXNC1O60486 1568 aa19.48■□□□□ 0.71
PDZRN3-201ENST00000263666 CAMK4Q16566 473 aa19.48■□□□□ 0.71
PDZRN3-201ENST00000263666 PRPF40BQ6NWY9 871 aaKnown RBP19.48■□□□□ 0.71
PDZRN3-201ENST00000263666 ZNF530Q6P9A1 599 aaPredicted RBP19.48■□□□□ 0.71
PDZRN3-201ENST00000263666 FSD2A1L4K1 749 aa19.47■□□□□ 0.71
PDZRN3-201ENST00000263666 H3BQV1 296 aa19.47■□□□□ 0.71
PDZRN3-201ENST00000263666 IFFO2Q5TF58 517 aa19.47■□□□□ 0.71
PDZRN3-201ENST00000263666 CCDC8Q9H0W5 538 aaPredicted RBP19.46■□□□□ 0.71
PDZRN3-201ENST00000263666 PI4KAP2A4QPH2 592 aa19.46■□□□□ 0.71
PDZRN3-201ENST00000263666 RIC3Q7Z5B4 369 aa19.46■□□□□ 0.71
PDZRN3-201ENST00000263666 PI4KAP1Q8N8J0 262 aa19.46■□□□□ 0.71
PDZRN3-201ENST00000263666 PALD1Q9ULE6 856 aa19.46■□□□□ 0.71
PDZRN3-201ENST00000263666 ABCA6Q8N139 1617 aa19.46■□□□□ 0.71
PDZRN3-201ENST00000263666 ERBB4Q15303 1308 aa19.46■□□□□ 0.71
PDZRN3-201ENST00000263666 AACSQ86V21 672 aa19.46■□□□□ 0.71
PDZRN3-201ENST00000263666 ESYT1Q9BSJ8 1104 aa19.46■□□□□ 0.71
PDZRN3-201ENST00000263666 RUFY2Q8WXA3 655 aa19.45■□□□□ 0.7
PDZRN3-201ENST00000263666 CCDC39Q9UFE4 941 aa19.45■□□□□ 0.7
PDZRN3-201ENST00000263666 MAP3K4Q9Y6R4 1608 aa19.45■□□□□ 0.7
PDZRN3-201ENST00000263666 DNAJC2Q99543 621 aaKnown RBP19.45■□□□□ 0.7
PDZRN3-201ENST00000263666 NECAB1Q8N987 351 aa19.45■□□□□ 0.7
PDZRN3-201ENST00000263666 KCNA6P17658 529 aa19.44■□□□□ 0.7
PDZRN3-201ENST00000263666 PUS7Q96PZ0 661 aaKnown RBP19.44■□□□□ 0.7
PDZRN3-201ENST00000263666 FAM177BA6PVY3 158 aa19.44■□□□□ 0.7
PDZRN3-201ENST00000263666 NPHP1O15259 732 aa19.44■□□□□ 0.7
PDZRN3-201ENST00000263666 HCLS1P14317 486 aaPredicted RBP19.44■□□□□ 0.7
PDZRN3-201ENST00000263666 EYA1Q99502 592 aa19.44■□□□□ 0.7
PDZRN3-201ENST00000263666 MAP3K19Q56UN5 1328 aa19.44■□□□□ 0.7
PDZRN3-201ENST00000263666 WDR33Q9C0J8 1336 aaKnown RBP19.44■□□□□ 0.7
PDZRN3-201ENST00000263666 SPHKAPQ2M3C7 1700 aa19.43■□□□□ 0.7
PDZRN3-201ENST00000263666 NEUROD6Q96NK8 337 aa19.43■□□□□ 0.7
PDZRN3-201ENST00000263666 BOLA2Q9H3K6 86 aa19.43■□□□□ 0.7
PDZRN3-201ENST00000263666 PA2G4Q9UQ80 394 aaKnown RBP19.43■□□□□ 0.7
PDZRN3-201ENST00000263666 CNPY2Q9Y2B0 182 aa19.43■□□□□ 0.7
PDZRN3-201ENST00000263666 ATP6V1DQ9Y5K8 247 aa19.43■□□□□ 0.7
PDZRN3-201ENST00000263666 MYOM2P54296 1465 aa19.43■□□□□ 0.7
PDZRN3-201ENST00000263666 ABCC4O15439 1325 aa19.43■□□□□ 0.7
PDZRN3-201ENST00000263666 FAM184AQ8NB25 1140 aa19.43■□□□□ 0.7
PDZRN3-201ENST00000263666 PTPRCP08575 1304 aa19.43■□□□□ 0.7
PDZRN3-201ENST00000263666 PIP4K2AP48426 406 aaPredicted RBP19.43■□□□□ 0.7
PDZRN3-201ENST00000263666 MCM2P49736 904 aa19.43■□□□□ 0.7
PDZRN3-201ENST00000263666 PRDM10Q9NQV6 1147 aa19.42■□□□□ 0.7
PDZRN3-201ENST00000263666 LTKP29376 864 aa19.42■□□□□ 0.7
PDZRN3-201ENST00000263666 GORABQ5T7V8 394 aa19.42■□□□□ 0.7
PDZRN3-201ENST00000263666 DDX11Q96FC9 970 aa19.42■□□□□ 0.7
PDZRN3-201ENST00000263666 STRN4Q9NRL3 753 aa19.42■□□□□ 0.7
PDZRN3-201ENST00000263666 LMBRD1Q9NUN5 540 aa19.42■□□□□ 0.7
PDZRN3-201ENST00000263666 TFIP11Q9UBB9 837 aaKnown RBP19.42■□□□□ 0.7
PDZRN3-201ENST00000263666 KIF1BO60333 1816 aa19.42■□□□□ 0.7
PDZRN3-201ENST00000263666 GIMAP6Q6P9H5 292 aa19.41■□□□□ 0.7
PDZRN3-201ENST00000263666 TMEM63CQ9P1W3 806 aa19.41■□□□□ 0.7
PDZRN3-201ENST00000263666 KIF2CQ99661 725 aa19.41■□□□□ 0.7
PDZRN3-201ENST00000263666 BTBD11A6QL63 1104 aa19.41■□□□□ 0.7
PDZRN3-201ENST00000263666 CHL1O00533 1208 aa19.41■□□□□ 0.7
PDZRN3-201ENST00000263666 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.41■□□□□ 0.7
PDZRN3-201ENST00000263666 LARP1BQ659C4 914 aaKnown RBP19.4■□□□□ 0.7
PDZRN3-201ENST00000263666 USP48Q86UV5 1035 aa19.4■□□□□ 0.7
PDZRN3-201ENST00000263666 C17orf53Q8N3J3 647 aaPredicted RBP19.4■□□□□ 0.7
PDZRN3-201ENST00000263666 CHPF2Q9P2E5 772 aa19.4■□□□□ 0.7
PDZRN3-201ENST00000263666 GADD45BO75293 160 aaPredicted RBP19.4■□□□□ 0.7
PDZRN3-201ENST00000263666 TPM2P07951 284 aa19.4■□□□□ 0.7
PDZRN3-201ENST00000263666 SYTL4Q96C24 671 aaPredicted RBP19.4■□□□□ 0.7
PDZRN3-201ENST00000263666 TTC12Q9H892 705 aaPredicted RBP19.4■□□□□ 0.7
PDZRN3-201ENST00000263666 NSFL1CQ9UNZ2 370 aaKnown RBP19.4■□□□□ 0.7
PDZRN3-201ENST00000263666 CFAP74Q9C0B2 1584 aa19.4■□□□□ 0.7
PDZRN3-201ENST00000263666 SHROOM2Q13796 1616 aa19.4■□□□□ 0.7
PDZRN3-201ENST00000263666 UNC5CLQ8IV45 518 aa19.4■□□□□ 0.7
PDZRN3-201ENST00000263666 CHMP4AQ9BY43 222 aa19.4■□□□□ 0.7
PDZRN3-201ENST00000263666 PDRG1Q9NUG6 133 aa19.4■□□□□ 0.7
PDZRN3-201ENST00000263666 CKAP2LQ8IYA6 745 aa19.39■□□□□ 0.69
PDZRN3-201ENST00000263666 CYP46A1Q9Y6A2 500 aa19.39■□□□□ 0.69
PDZRN3-201ENST00000263666 NEXNQ0ZGT2 675 aa19.39■□□□□ 0.69
PDZRN3-201ENST00000263666 CHMLP26374 656 aa19.38■□□□□ 0.69
PDZRN3-201ENST00000263666 RHPN1Q8TCX5 695 aa19.38■□□□□ 0.69
PDZRN3-201ENST00000263666 TET3O43151 1660 aa19.38■□□□□ 0.69
PDZRN3-201ENST00000263666 FAM173BQ6P4H8 233 aa19.38■□□□□ 0.69
PDZRN3-201ENST00000263666 LRRC59Q96AG4 307 aaKnown RBP19.38■□□□□ 0.69
PDZRN3-201ENST00000263666 CSPP1Q1MSJ5 1256 aa19.37■□□□□ 0.69
PDZRN3-201ENST00000263666 PRDM11Q9NQV5 511 aa19.37■□□□□ 0.69
PDZRN3-201ENST00000263666 LRSAM1Q6UWE0 723 aa19.37■□□□□ 0.69
PDZRN3-201ENST00000263666 TTC5Q8N0Z6 440 aa19.37■□□□□ 0.69
PDZRN3-201ENST00000263666 GPT2Q8TD30 523 aa19.37■□□□□ 0.69
PDZRN3-201ENST00000263666 KIF1BPQ96EK5 621 aa19.37■□□□□ 0.69
PDZRN3-201ENST00000263666 RRP9O43818 475 aaKnown RBP19.36■□□□□ 0.69
PDZRN3-201ENST00000263666 CCDC85AQ96PX6 553 aaPredicted RBP19.36■□□□□ 0.69
PDZRN3-201ENST00000263666 TBX22Q9Y458 520 aa19.36■□□□□ 0.69
PDZRN3-201ENST00000263666 HECW2Q9P2P5 1572 aa19.36■□□□□ 0.69
PDZRN3-201ENST00000263666 RTL1A6NKG5 1358 aa19.36■□□□□ 0.69
PDZRN3-201ENST00000263666 TRIM5Q9C035 493 aa19.36■□□□□ 0.69
PDZRN3-201ENST00000263666 DNAAF4Q8WXU2 420 aa19.36■□□□□ 0.69
PDZRN3-201ENST00000263666 TSC1Q92574 1164 aa19.36■□□□□ 0.69
PDZRN3-201ENST00000263666 SF3A1Q15459 793 aaKnown RBP19.35■□□□□ 0.69
PDZRN3-201ENST00000263666 HSP90AB4PQ58FF6 505 aa19.35■□□□□ 0.69
PDZRN3-201ENST00000263666 FMNL2Q96PY5 1086 aa19.35■□□□□ 0.69
PDZRN3-201ENST00000263666 EFCAB6Q5THR3 1501 aa19.35■□□□□ 0.69
PDZRN3-201ENST00000263666 ZFYVE9O95405 1425 aa19.35■□□□□ 0.69
PDZRN3-201ENST00000263666 BECN2A8MW95 431 aa19.35■□□□□ 0.69
PDZRN3-201ENST00000263666 PIP4K2BP78356 416 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms