RNA–Protein interactions for RNA: ENST00000263228.3

UBE2R2-201, Transcript of ubiquitin conjugating enzyme E2 R2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2R2, Length 4,075 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2R2-201ENST00000263228 ASXL1Q8IXJ9 1541 aa20.04■□□□□ 0.8
UBE2R2-201ENST00000263228 PSME1Q06323 249 aa20.04■□□□□ 0.8
UBE2R2-201ENST00000263228 TAF7Q15545 349 aaPredicted RBP20.04■□□□□ 0.8
UBE2R2-201ENST00000263228 RASSF8Q8NHQ8 419 aa20.04■□□□□ 0.8
UBE2R2-201ENST00000263228 PLEKHM2Q8IWE5 1019 aa20.03■□□□□ 0.8
UBE2R2-201ENST00000263228 C14orf93Q9H972 538 aaKnown RBP20.03■□□□□ 0.8
UBE2R2-201ENST00000263228 PDCL2Q8N4E4 241 aa20.03■□□□□ 0.8
UBE2R2-201ENST00000263228 HMGN5P82970 282 aaKnown RBP20.02■□□□□ 0.8
UBE2R2-201ENST00000263228 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.02■□□□□ 0.8
UBE2R2-201ENST00000263228 TRIM35Q9UPQ4 493 aa20.02■□□□□ 0.8
UBE2R2-201ENST00000263228 V9GYY5 206 aaPredicted RBP20.02■□□□□ 0.8
UBE2R2-201ENST00000263228 KRT85P78386 507 aa20.02■□□□□ 0.8
UBE2R2-201ENST00000263228 RTEL1-TNFRSF6BF6WH68 1400 aa20.02■□□□□ 0.8
UBE2R2-201ENST00000263228 ME1P48163 572 aa20.02■□□□□ 0.8
UBE2R2-201ENST00000263228 MRPL50Q8N5N7 158 aaKnown RBP20.02■□□□□ 0.8
UBE2R2-201ENST00000263228 SPATA32Q96LK8 384 aa20.02■□□□□ 0.8
UBE2R2-201ENST00000263228 FAM173BQ6P4H8 233 aa20.02■□□□□ 0.79
UBE2R2-201ENST00000263228 CCDC61Q9Y6R9 512 aa20.02■□□□□ 0.79
UBE2R2-201ENST00000263228 USP48Q86UV5 1035 aa20.01■□□□□ 0.79
UBE2R2-201ENST00000263228 USP19O94966 1318 aa20.01■□□□□ 0.79
UBE2R2-201ENST00000263228 ZBTB7BO15156 539 aaPredicted RBP20.01■□□□□ 0.79
UBE2R2-201ENST00000263228 E9PCH4 1651 aa20.01■□□□□ 0.79
UBE2R2-201ENST00000263228 NUP62CLQ9H1M0 184 aa20.01■□□□□ 0.79
UBE2R2-201ENST00000263228 POLKQ9UBT6 870 aa20.01■□□□□ 0.79
UBE2R2-201ENST00000263228 PPP4R3BQ5MIZ7 849 aa20■□□□□ 0.79
UBE2R2-201ENST00000263228 NLRP2Q9NX02 1062 aa20■□□□□ 0.79
UBE2R2-201ENST00000263228 PRDM15P57071 1507 aaPredicted RBP20■□□□□ 0.79
UBE2R2-201ENST00000263228 KINO60870 393 aaKnown RBP20■□□□□ 0.79
UBE2R2-201ENST00000263228 PDE1AP54750 535 aa20■□□□□ 0.79
UBE2R2-201ENST00000263228 RAB11FIP4Q86YS3 637 aa20■□□□□ 0.79
UBE2R2-201ENST00000263228 CCDC112Q8NEF3 446 aa20■□□□□ 0.79
UBE2R2-201ENST00000263228 ISM2Q6H9L7 571 aa19.99■□□□□ 0.79
UBE2R2-201ENST00000263228 BLOC1S2Q6QNY1 142 aa19.99■□□□□ 0.79
UBE2R2-201ENST00000263228 LRRC2Q9BYS8 371 aa19.99■□□□□ 0.79
UBE2R2-201ENST00000263228 TMX1Q9H3N1 280 aa19.99■□□□□ 0.79
UBE2R2-201ENST00000263228 G2E3Q7L622 706 aa19.98■□□□□ 0.79
UBE2R2-201ENST00000263228 RAB11FIP3O75154 756 aa19.98■□□□□ 0.79
UBE2R2-201ENST00000263228 LRSAM1Q6UWE0 723 aa19.98■□□□□ 0.79
UBE2R2-201ENST00000263228 FLIIQ13045 1269 aa19.98■□□□□ 0.79
UBE2R2-201ENST00000263228 MNS1Q8NEH6 495 aa19.98■□□□□ 0.79
UBE2R2-201ENST00000263228 SNX21Q969T3 373 aa19.98■□□□□ 0.79
UBE2R2-201ENST00000263228 ANTXR1Q9H6X2 564 aa19.97■□□□□ 0.79
UBE2R2-201ENST00000263228 HDAC5Q9UQL6 1122 aa19.97■□□□□ 0.79
UBE2R2-201ENST00000263228 SYNE3Q6ZMZ3 975 aa19.97■□□□□ 0.79
UBE2R2-201ENST00000263228 TTC5Q8N0Z6 440 aa19.97■□□□□ 0.79
UBE2R2-201ENST00000263228 BRPF1P55201 1214 aaPredicted RBP19.97■□□□□ 0.79
UBE2R2-201ENST00000263228 HSP90AB4PQ58FF6 505 aa19.97■□□□□ 0.79
UBE2R2-201ENST00000263228 SHROOM2Q13796 1616 aa19.96■□□□□ 0.79
UBE2R2-201ENST00000263228 MTMR7Q9Y216 660 aa19.96■□□□□ 0.79
UBE2R2-201ENST00000263228 PPP1R42Q7Z4L9 355 aa19.96■□□□□ 0.79
UBE2R2-201ENST00000263228 ZKSCAN5Q9Y2L8 839 aa19.96■□□□□ 0.79
UBE2R2-201ENST00000263228 DNM1Q05193 864 aaKnown RBP19.96■□□□□ 0.79
UBE2R2-201ENST00000263228 USP26Q9BXU7 913 aa19.96■□□□□ 0.79
UBE2R2-201ENST00000263228 GJB2P29033 226 aa19.95■□□□□ 0.78
UBE2R2-201ENST00000263228 ZNF530Q6P9A1 599 aaPredicted RBP19.95■□□□□ 0.78
UBE2R2-201ENST00000263228 ABCC1P33527 1531 aa19.95■□□□□ 0.78
UBE2R2-201ENST00000263228 STX6O43752 255 aa19.95■□□□□ 0.78
UBE2R2-201ENST00000263228 POLR3AO14802 1390 aaPredicted RBP19.95■□□□□ 0.78
UBE2R2-201ENST00000263228 BIN1O00499 593 aa19.95■□□□□ 0.78
UBE2R2-201ENST00000263228 NFXL1Q6ZNB6 911 aa19.95■□□□□ 0.78
UBE2R2-201ENST00000263228 TRMT2AQ8IZ69 625 aaKnown RBP19.95■□□□□ 0.78
UBE2R2-201ENST00000263228 GADD45BO75293 160 aaPredicted RBP19.94■□□□□ 0.78
UBE2R2-201ENST00000263228 MAP3K11Q16584 847 aa19.94■□□□□ 0.78
UBE2R2-201ENST00000263228 MAST1Q9Y2H9 1570 aa19.94■□□□□ 0.78
UBE2R2-201ENST00000263228 CCDC183Q5T5S1 534 aa19.94■□□□□ 0.78
UBE2R2-201ENST00000263228 PSMA5P28066 241 aa19.94■□□□□ 0.78
UBE2R2-201ENST00000263228 CCT2P78371 535 aaKnown RBP19.94■□□□□ 0.78
UBE2R2-201ENST00000263228 MPRIPQ6WCQ1 1025 aa19.94■□□□□ 0.78
UBE2R2-201ENST00000263228 MTERF4Q7Z6M4 381 aaKnown RBP19.94■□□□□ 0.78
UBE2R2-201ENST00000263228 TMEM63CQ9P1W3 806 aa19.94■□□□□ 0.78
UBE2R2-201ENST00000263228 DDX58O95786 925 aaKnown RBP19.93■□□□□ 0.78
UBE2R2-201ENST00000263228 CLASP1Q7Z460 1538 aa19.93■□□□□ 0.78
UBE2R2-201ENST00000263228 ANKRD44Q8N8A2 993 aa19.93■□□□□ 0.78
UBE2R2-201ENST00000263228 SLC52A1Q9NWF4 448 aa19.93■□□□□ 0.78
UBE2R2-201ENST00000263228 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.93■□□□□ 0.785e-7■□□□□ 9.9
UBE2R2-201ENST00000263228 RBM25P49756 843 aaKnown RBP19.92■□□□□ 0.78
UBE2R2-201ENST00000263228 NOLC1Q14978 699 aaKnown RBP eCLIP19.92■□□□□ 0.78
UBE2R2-201ENST00000263228 ATP7AQ04656 1500 aa19.92■□□□□ 0.78
UBE2R2-201ENST00000263228 OFD1O75665 1012 aa19.92■□□□□ 0.78
UBE2R2-201ENST00000263228 PDCP20941 246 aa19.92■□□□□ 0.78
UBE2R2-201ENST00000263228 PIP4K2AP48426 406 aaPredicted RBP19.92■□□□□ 0.78
UBE2R2-201ENST00000263228 STK38Q15208 465 aa19.92■□□□□ 0.78
UBE2R2-201ENST00000263228 CEP85Q6P2H3 762 aa19.92■□□□□ 0.78
UBE2R2-201ENST00000263228 ERBB4Q15303 1308 aa19.92■□□□□ 0.78
UBE2R2-201ENST00000263228 PI4KAP2A4QPH2 592 aa19.92■□□□□ 0.78
UBE2R2-201ENST00000263228 PI4KAP1Q8N8J0 262 aa19.92■□□□□ 0.78
UBE2R2-201ENST00000263228 SYTL4Q96C24 671 aaPredicted RBP19.92■□□□□ 0.78
UBE2R2-201ENST00000263228 HSP90AA4PQ58FG1 418 aa19.92■□□□□ 0.78
UBE2R2-201ENST00000263228 CGNQ9P2M7 1197 aaKnown RBP19.92■□□□□ 0.78
UBE2R2-201ENST00000263228 DCTPP1Q9H773 170 aa19.91■□□□□ 0.78
UBE2R2-201ENST00000263228 PODXL2Q9NZ53 605 aa19.91■□□□□ 0.78
UBE2R2-201ENST00000263228 LIMCH1Q9UPQ0 1083 aa19.91■□□□□ 0.78
UBE2R2-201ENST00000263228 PIK3C2GO75747 1445 aa19.91■□□□□ 0.78
UBE2R2-201ENST00000263228 FKBP4Q02790 459 aaKnown RBP eCLIP19.91■□□□□ 0.78
UBE2R2-201ENST00000263228 PA2G4Q9UQ80 394 aaKnown RBP19.91■□□□□ 0.78
UBE2R2-201ENST00000263228 GSPT1P15170 499 aaKnown RBP19.91■□□□□ 0.78
UBE2R2-201ENST00000263228 ZNF518AQ6AHZ1 1483 aa19.9■□□□□ 0.78
UBE2R2-201ENST00000263228 INSRP06213 1382 aa19.9■□□□□ 0.78
UBE2R2-201ENST00000263228 TNNT1P13805 278 aa19.9■□□□□ 0.78
UBE2R2-201ENST00000263228 ESCO1Q5FWF5 840 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms