RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 TNS3Q68CZ2 1445 aa24.5■■□□□ 1.51
HOXC13-201ENST00000243056 DCTN1Q14203 1278 aa24.5■■□□□ 1.51
HOXC13-201ENST00000243056 SOS2Q07890 1332 aaPredicted RBP24.5■■□□□ 1.51
HOXC13-201ENST00000243056 RAB3GAP1Q15042 981 aa24.5■■□□□ 1.51
HOXC13-201ENST00000243056 PDLIM2Q96JY6 352 aa24.5■■□□□ 1.51
HOXC13-201ENST00000243056 NBPF6Q5VWK0 638 aa24.49■■□□□ 1.51
HOXC13-201ENST00000243056 NBPF4Q96M43 638 aa24.49■■□□□ 1.51
HOXC13-201ENST00000243056 LTN1O94822 1766 aa24.49■■□□□ 1.51
HOXC13-201ENST00000243056 MFAP1P55081 439 aaKnown RBP24.49■■□□□ 1.51
HOXC13-201ENST00000243056 TSC1Q92574 1164 aa24.49■■□□□ 1.51
HOXC13-201ENST00000243056 ALS2Q96Q42 1657 aa24.49■■□□□ 1.51
HOXC13-201ENST00000243056 IBTKQ9P2D0 1353 aaPredicted RBP24.48■■□□□ 1.51
HOXC13-201ENST00000243056 PDZRN3Q9UPQ7 1066 aa24.47■■□□□ 1.51
HOXC13-201ENST00000243056 PHF23Q9BUL5 403 aaPredicted RBP24.46■■□□□ 1.51
HOXC13-201ENST00000243056 TSR2Q969E8 191 aaKnown RBP24.46■■□□□ 1.51
HOXC13-201ENST00000243056 COG6Q9Y2V7 657 aa24.46■■□□□ 1.51
HOXC13-201ENST00000243056 TRMT2AQ8IZ69 625 aaKnown RBP24.45■■□□□ 1.5
HOXC13-201ENST00000243056 PANK1Q8TE04 598 aa24.45■■□□□ 1.5
HOXC13-201ENST00000243056 PTMSP20962 102 aa24.44■■□□□ 1.5
HOXC13-201ENST00000243056 ANKRD24Q8TF21 1146 aa24.44■■□□□ 1.5
HOXC13-201ENST00000243056 USP54Q70EL1 1684 aa24.44■■□□□ 1.5
HOXC13-201ENST00000243056 SLIT3O75094 1523 aa24.44■■□□□ 1.5
HOXC13-201ENST00000243056 KIAA0232Q92628 1395 aa24.44■■□□□ 1.5
HOXC13-201ENST00000243056 HAP1P54257 671 aaPredicted RBP24.43■■□□□ 1.5
HOXC13-201ENST00000243056 NFE2L2Q16236 605 aa24.43■■□□□ 1.5
HOXC13-201ENST00000243056 SMC5Q8IY18 1101 aa24.43■■□□□ 1.5
HOXC13-201ENST00000243056 MYRIPQ8NFW9 859 aa24.43■■□□□ 1.5
HOXC13-201ENST00000243056 IGSF1Q8N6C5 1336 aa24.43■■□□□ 1.5
HOXC13-201ENST00000243056 CIZ1Q9ULV3 898 aaPredicted RBP24.43■■□□□ 1.5
HOXC13-201ENST00000243056 CGNQ9P2M7 1197 aaKnown RBP24.42■■□□□ 1.5
HOXC13-201ENST00000243056 RBSNQ9H1K0 784 aa24.41■■□□□ 1.5
HOXC13-201ENST00000243056 MTHFSDQ2M296 383 aaKnown RBP24.41■■□□□ 1.5
HOXC13-201ENST00000243056 KLHL40Q2TBA0 621 aa24.4■■□□□ 1.5
HOXC13-201ENST00000243056 MCM5P33992 734 aa24.4■■□□□ 1.5
HOXC13-201ENST00000243056 PDE3AQ14432 1141 aa24.4■■□□□ 1.5
HOXC13-201ENST00000243056 MCM10Q7L590 875 aa24.4■■□□□ 1.5
HOXC13-201ENST00000243056 ROBO1Q9Y6N7 1651 aa24.39■■□□□ 1.5
HOXC13-201ENST00000243056 E9PSI1 815 aa24.39■■□□□ 1.5
HOXC13-201ENST00000243056 IGSF3O75054 1194 aa24.39■■□□□ 1.5
HOXC13-201ENST00000243056 ARHGEF10O15013 1369 aa24.39■■□□□ 1.49
HOXC13-201ENST00000243056 UBAP1LF5GYI3 381 aa24.39■■□□□ 1.49
HOXC13-201ENST00000243056 ZNF445P59923 1031 aa24.39■■□□□ 1.49
HOXC13-201ENST00000243056 TAF3Q5VWG9 929 aa24.39■■□□□ 1.49
HOXC13-201ENST00000243056 PCDHB15Q9Y5E8 787 aa24.39■■□□□ 1.49
HOXC13-201ENST00000243056 DDX49Q9Y6V7 483 aaKnown RBP24.39■■□□□ 1.49
HOXC13-201ENST00000243056 CCDC27Q2M243 656 aa24.38■■□□□ 1.49
HOXC13-201ENST00000243056 RGPD1P0DJD0 1748 aa24.38■■□□□ 1.49
HOXC13-201ENST00000243056 RGPD2P0DJD1 1756 aa24.37■■□□□ 1.49
HOXC13-201ENST00000243056 RGPD5Q99666 1765 aa24.37■■□□□ 1.49
HOXC13-201ENST00000243056 PRDM11Q9NQV5 511 aa24.36■■□□□ 1.49
HOXC13-201ENST00000243056 RTL1A6NKG5 1358 aa24.36■■□□□ 1.49
HOXC13-201ENST00000243056 WDR63Q8IWG1 891 aa24.36■■□□□ 1.49
HOXC13-201ENST00000243056 FTSJ3Q8IY81 847 aaKnown RBP24.36■■□□□ 1.49
HOXC13-201ENST00000243056 SSFA2P28290 1259 aa24.35■■□□□ 1.49
HOXC13-201ENST00000243056 NLRP2Q9NX02 1062 aa24.35■■□□□ 1.49
HOXC13-201ENST00000243056 KIF24Q5T7B8 1368 aa24.35■■□□□ 1.49
HOXC13-201ENST00000243056 SPDYE4A6NLX3 237 aa24.35■■□□□ 1.49
HOXC13-201ENST00000243056 SNX21Q969T3 373 aa24.34■■□□□ 1.49
HOXC13-201ENST00000243056 FOXD4L1Q9NU39 408 aa24.34■■□□□ 1.49
HOXC13-201ENST00000243056 KDRP35968 1356 aa24.34■■□□□ 1.49
HOXC13-201ENST00000243056 ERBB3P21860 1342 aa24.34■■□□□ 1.49
HOXC13-201ENST00000243056 CSB-PGBD3P0DP91 1061 aa24.34■■□□□ 1.49
HOXC13-201ENST00000243056 FAM177BA6PVY3 158 aa24.33■■□□□ 1.49
HOXC13-201ENST00000243056 HSP90AB1P08238 724 aaKnown RBP24.33■■□□□ 1.49
HOXC13-201ENST00000243056 NGEFQ8N5V2 710 aa24.33■■□□□ 1.49
HOXC13-201ENST00000243056 BCL2L13Q9BXK5 485 aa24.33■■□□□ 1.49
HOXC13-201ENST00000243056 PHRF1Q9P1Y6 1649 aaKnown RBP24.33■■□□□ 1.49
HOXC13-201ENST00000243056 CDK11BP21127 795 aaKnown RBP24.32■■□□□ 1.48
HOXC13-201ENST00000243056 ZSCAN23Q3MJ62 389 aa24.32■■□□□ 1.48
HOXC13-201ENST00000243056 MIS18AQ9NYP9 233 aa24.32■■□□□ 1.48
HOXC13-201ENST00000243056 TOM1O60784 492 aa24.32■■□□□ 1.48
HOXC13-201ENST00000243056 CCDC39Q9UFE4 941 aa24.31■■□□□ 1.48
HOXC13-201ENST00000243056 NHSL1Q5SYE7 1610 aa24.31■■□□□ 1.48
HOXC13-201ENST00000243056 STRN4Q9NRL3 753 aa24.3■■□□□ 1.48
HOXC13-201ENST00000243056 DLG5Q8TDM6 1919 aa24.3■■□□□ 1.48
HOXC13-201ENST00000243056 ELL2O00472 640 aaPredicted RBP24.3■■□□□ 1.48
HOXC13-201ENST00000243056 GTF2F1P35269 517 aaKnown RBP eCLIP24.3■■□□□ 1.48
HOXC13-201ENST00000243056 EXOSC9Q06265 439 aaKnown RBP24.3■■□□□ 1.48
HOXC13-201ENST00000243056 CAVIN1Q6NZI2 390 aaKnown RBP24.3■■□□□ 1.48
HOXC13-201ENST00000243056 PRIM1P49642 420 aaKnown RBP24.29■■□□□ 1.48
HOXC13-201ENST00000243056 IRX5P78411 483 aaPredicted RBP24.29■■□□□ 1.48
HOXC13-201ENST00000243056 MAPK8IP2Q13387 824 aaPredicted RBP24.29■■□□□ 1.48
HOXC13-201ENST00000243056 DNTTIP2Q5QJE6 756 aaKnown RBP24.29■■□□□ 1.48
HOXC13-201ENST00000243056 GOLGA6L22H0YM25 854 aa24.28■■□□□ 1.48
HOXC13-201ENST00000243056 NUTM2BA6NNL0 878 aaPredicted RBP24.27■■□□□ 1.48
HOXC13-201ENST00000243056 NUTM2EB1AL46 878 aaPredicted RBP24.27■■□□□ 1.48
HOXC13-201ENST00000243056 BAG4O95429 457 aaKnown RBP24.27■■□□□ 1.48
HOXC13-201ENST00000243056 NUTM2AQ8IVF1 878 aaPredicted RBP24.27■■□□□ 1.48
HOXC13-201ENST00000243056 CRYBG1Q9Y4K1 1723 aa24.27■■□□□ 1.48
HOXC13-201ENST00000243056 ADAMTS2O95450 1211 aa24.27■■□□□ 1.48
HOXC13-201ENST00000243056 RBM25P49756 843 aaKnown RBP24.27■■□□□ 1.48
HOXC13-201ENST00000243056 CLEC17AQ6ZS10 378 aa24.26■■□□□ 1.47
HOXC13-201ENST00000243056 CD2BP2O95400 341 aaKnown RBP24.25■■□□□ 1.47
HOXC13-201ENST00000243056 KRT24Q2M2I5 525 aa24.25■■□□□ 1.47
HOXC13-201ENST00000243056 PRIMPOLQ96LW4 560 aa24.25■■□□□ 1.47
HOXC13-201ENST00000243056 TNNQ9UQP3 1299 aa24.25■■□□□ 1.47
HOXC13-201ENST00000243056 KIAA2012Q0VF49 1180 aa24.25■■□□□ 1.47
HOXC13-201ENST00000243056 MBIPQ9NS73 344 aa24.24■■□□□ 1.47
HOXC13-201ENST00000243056 ZNF771Q7L3S4 317 aaPredicted RBP24.24■■□□□ 1.47
HOXC13-201ENST00000243056 ZFP91Q96JP5 570 aaPredicted RBP24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms