RNA–Protein interactions for RNA: ENST00000238892.3

CRIPT-201, Transcript of CXXC repeat containing interactor of PDZ3 domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRIPT, Length 1,953 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIPT-201ENST00000238892 NSD3Q9BZ95 1437 aa11.78□□□□□ -0.52
CRIPT-201ENST00000238892 FOXN1O15353 648 aa11.78□□□□□ -0.52
CRIPT-201ENST00000238892 ANKRD24Q8TF21 1146 aa11.78□□□□□ -0.52
CRIPT-201ENST00000238892 RGPD5Q99666 1765 aa11.77□□□□□ -0.53
CRIPT-201ENST00000238892 RTL1A6NKG5 1358 aa11.77□□□□□ -0.53
CRIPT-201ENST00000238892 IP6K1Q92551 441 aa11.77□□□□□ -0.53
CRIPT-201ENST00000238892 GLIPR1L2Q4G1C9 344 aa11.76□□□□□ -0.53
CRIPT-201ENST00000238892 PPP4R3CPQ6ZMV5 832 aa11.76□□□□□ -0.53
CRIPT-201ENST00000238892 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.76□□□□□ -0.53
CRIPT-201ENST00000238892 SOX12O15370 315 aa11.76□□□□□ -0.53
CRIPT-201ENST00000238892 NME9Q86XW9 330 aa11.76□□□□□ -0.53
CRIPT-201ENST00000238892 TMC1Q8TDI8 760 aa11.76□□□□□ -0.53
CRIPT-201ENST00000238892 ZMYND15Q9H091 742 aa11.76□□□□□ -0.53
CRIPT-201ENST00000238892 A0A1W2PP64 1363 aa11.75□□□□□ -0.53
CRIPT-201ENST00000238892 LTN1O94822 1766 aa11.75□□□□□ -0.53
CRIPT-201ENST00000238892 CGNL1Q0VF96 1302 aa11.75□□□□□ -0.53
CRIPT-201ENST00000238892 KCPQ6ZWJ8 1503 aa11.74□□□□□ -0.53
CRIPT-201ENST00000238892 KIF13BQ9NQT8 1826 aa11.74□□□□□ -0.53
CRIPT-201ENST00000238892 FRAT1Q92837 279 aaPredicted RBP11.74□□□□□ -0.53
CRIPT-201ENST00000238892 COG3Q96JB2 828 aa11.74□□□□□ -0.53
CRIPT-201ENST00000238892 COL23A1Q86Y22 540 aaPredicted RBP11.74□□□□□ -0.53
CRIPT-201ENST00000238892 ACSBG1Q96GR2 724 aa11.74□□□□□ -0.53
CRIPT-201ENST00000238892 CREBZFQ9NS37 354 aa11.74□□□□□ -0.53
CRIPT-201ENST00000238892 KIF24Q5T7B8 1368 aa11.73□□□□□ -0.53
CRIPT-201ENST00000238892 ANKRD36BQ8N2N9 1353 aa11.72□□□□□ -0.53
CRIPT-201ENST00000238892 ARFGEF1Q9Y6D6 1849 aa11.72□□□□□ -0.53
CRIPT-201ENST00000238892 CDCA8Q53HL2 280 aa11.72□□□□□ -0.53
CRIPT-201ENST00000238892 NPM2Q86SE8 214 aaKnown RBP11.72□□□□□ -0.53
CRIPT-201ENST00000238892 SLC12A5Q9H2X9 1139 aa11.72□□□□□ -0.53
CRIPT-201ENST00000238892 PODXL2Q9NZ53 605 aa11.72□□□□□ -0.53
CRIPT-201ENST00000238892 CCDC85CA6NKD9 419 aa11.71□□□□□ -0.53
CRIPT-201ENST00000238892 PRPF38BQ5VTL8 546 aaKnown RBP11.71□□□□□ -0.53
CRIPT-201ENST00000238892 MSL1Q68DK7 614 aa11.71□□□□□ -0.53
CRIPT-201ENST00000238892 C5P01031 1676 aa11.71□□□□□ -0.53
CRIPT-201ENST00000238892 CNTNAP1P78357 1384 aa11.71□□□□□ -0.54
CRIPT-201ENST00000238892 KIAA1551Q9HCM1 1747 aa11.7□□□□□ -0.54
CRIPT-201ENST00000238892 TCERG1O14776 1098 aaKnown RBP11.7□□□□□ -0.54
CRIPT-201ENST00000238892 NFKBIBQ15653 356 aa11.7□□□□□ -0.54
CRIPT-201ENST00000238892 VSIG10Q8N0Z9 540 aa11.7□□□□□ -0.54
CRIPT-201ENST00000238892 PDE4AP27815 886 aa11.7□□□□□ -0.54
CRIPT-201ENST00000238892 TGFB2P61812 414 aa11.7□□□□□ -0.54
CRIPT-201ENST00000238892 C9orf131Q5VYM1 1079 aa11.7□□□□□ -0.54
CRIPT-201ENST00000238892 BACH2Q9BYV9 841 aa11.7□□□□□ -0.54
CRIPT-201ENST00000238892 HOXC9P31274 260 aa11.69□□□□□ -0.54
CRIPT-201ENST00000238892 AMPHP49418 695 aa11.69□□□□□ -0.54
CRIPT-201ENST00000238892 ARHGAP27Q6ZUM4 889 aa11.69□□□□□ -0.54
CRIPT-201ENST00000238892 GCC1Q96CN9 775 aa11.69□□□□□ -0.54
CRIPT-201ENST00000238892 RRAGCQ9HB90 399 aa11.69□□□□□ -0.54
CRIPT-201ENST00000238892 VIRMAQ69YN4 1812 aaKnown RBP11.69□□□□□ -0.54
CRIPT-201ENST00000238892 FAM9BQ8IZU0 186 aa11.68□□□□□ -0.54
CRIPT-201ENST00000238892 TESK2Q96S53 571 aa11.68□□□□□ -0.54
CRIPT-201ENST00000238892 PRKRIP1Q9H875 184 aaPredicted RBP11.68□□□□□ -0.54
CRIPT-201ENST00000238892 NUDCQ9Y266 331 aa11.68□□□□□ -0.54
CRIPT-201ENST00000238892 HSPA8P11142 646 aaKnown RBP11.68□□□□□ -0.54
CRIPT-201ENST00000238892 TMF1P82094 1093 aa11.68□□□□□ -0.54
CRIPT-201ENST00000238892 ZCRB1Q8TBF4 217 aaKnown RBP11.68□□□□□ -0.54
CRIPT-201ENST00000238892 CCNL1Q9UK58 526 aaPredicted RBP11.68□□□□□ -0.54
CRIPT-201ENST00000238892 NSD2O96028 1365 aa11.67□□□□□ -0.54
CRIPT-201ENST00000238892 MAP3K19Q56UN5 1328 aa11.67□□□□□ -0.54
CRIPT-201ENST00000238892 VEGFAP15692 232 aaPredicted RBP11.67□□□□□ -0.54
CRIPT-201ENST00000238892 MS4A1P11836 297 aa11.67□□□□□ -0.54
CRIPT-201ENST00000238892 LBX1P52954 281 aa11.67□□□□□ -0.54
CRIPT-201ENST00000238892 WBP1LQ9NX94 342 aa11.67□□□□□ -0.54
CRIPT-201ENST00000238892 MRS2Q9HD23 443 aa11.66□□□□□ -0.54
CRIPT-201ENST00000238892 DDX54Q8TDD1 881 aaKnown RBP11.65□□□□□ -0.54
CRIPT-201ENST00000238892 RAPGEF4Q8WZA2 1011 aa11.65□□□□□ -0.54
CRIPT-201ENST00000238892 DOT1LQ8TEK3 1739 aa11.65□□□□□ -0.54
CRIPT-201ENST00000238892 INSRP06213 1382 aa11.65□□□□□ -0.54
CRIPT-201ENST00000238892 USP47Q96K76 1375 aa11.65□□□□□ -0.54
CRIPT-201ENST00000238892 PCDH11XQ9BZA7 1347 aa11.65□□□□□ -0.54
CRIPT-201ENST00000238892 PCDH11YQ9BZA8 1340 aa11.65□□□□□ -0.54
CRIPT-201ENST00000238892 BRCA1P38398 1863 aaKnown RBP11.65□□□□□ -0.55
CRIPT-201ENST00000238892 ST20-MTHFSA0A0A6YYL1 179 aa11.65□□□□□ -0.55
CRIPT-201ENST00000238892 TATP17735 454 aaPredicted RBP11.65□□□□□ -0.55
CRIPT-201ENST00000238892 DDRGK1Q96HY6 314 aa11.65□□□□□ -0.55
CRIPT-201ENST00000238892 BCS1LQ9Y276 419 aa11.65□□□□□ -0.55
CRIPT-201ENST00000238892 FLT4P35916 1363 aa11.64□□□□□ -0.55
CRIPT-201ENST00000238892 HSPA5P11021 654 aaKnown RBP11.64□□□□□ -0.55
CRIPT-201ENST00000238892 SMARCC1Q92922 1105 aaPredicted RBP11.64□□□□□ -0.55
CRIPT-201ENST00000238892 DAXXQ9UER7 740 aaPredicted RBP11.64□□□□□ -0.55
CRIPT-201ENST00000238892 MAP2K1Q02750 393 aaPredicted RBP11.63□□□□□ -0.55
CRIPT-201ENST00000238892 LTV1Q96GA3 475 aaPredicted RBP11.63□□□□□ -0.55
CRIPT-201ENST00000238892 RRAGDQ9NQL2 400 aaPredicted RBP11.63□□□□□ -0.55
CRIPT-201ENST00000238892 RNF181Q9P0P0 153 aa11.63□□□□□ -0.55
CRIPT-201ENST00000238892 MKRN1Q9UHC7 482 aaKnown RBP11.63□□□□□ -0.55
CRIPT-201ENST00000238892 PRIM1P49642 420 aaKnown RBP11.63□□□□□ -0.55
CRIPT-201ENST00000238892 MEGF6O75095 1541 aa11.63□□□□□ -0.55
CRIPT-201ENST00000238892 TAF1LQ8IZX4 1826 aa11.62□□□□□ -0.55
CRIPT-201ENST00000238892 UTRNP46939 3433 aa11.62□□□□□ -0.55
CRIPT-201ENST00000238892 SYTL4Q96C24 671 aaPredicted RBP11.62□□□□□ -0.55
CRIPT-201ENST00000238892 THSD7BQ9C0I4 1608 aa11.62□□□□□ -0.55
CRIPT-201ENST00000238892 FCHSD2O94868 740 aa11.61□□□□□ -0.55
CRIPT-201ENST00000238892 C4BP0C0L5 1744 aa11.61□□□□□ -0.55
CRIPT-201ENST00000238892 FYB1O15117 783 aa11.61□□□□□ -0.55
CRIPT-201ENST00000238892 RRP9O43818 475 aaKnown RBP11.61□□□□□ -0.55
CRIPT-201ENST00000238892 N4BP2Q86UW6 1770 aaPredicted RBP11.61□□□□□ -0.55
CRIPT-201ENST00000238892 KIF20BQ96Q89 1820 aa11.6□□□□□ -0.55
CRIPT-201ENST00000238892 NCAPD2Q15021 1401 aa11.6□□□□□ -0.55
CRIPT-201ENST00000238892 UBR3Q6ZT12 1888 aa11.6□□□□□ -0.55
CRIPT-201ENST00000238892 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.59□□□□□ -0.552e-8■■□□□ 12
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms