RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Maco1Q7TQE6 664 aaKnown RBP26.94■■□□□ 1.9
Ccdc88a-202ENSMUST00000109477 4930523C07RikE9Q2T4 99 aa26.93■■□□□ 1.9
Ccdc88a-202ENSMUST00000109477 Taok3Q8BYC6 898 aa26.93■■□□□ 1.9
Ccdc88a-202ENSMUST00000109477 Ssfa2Q922B9 1252 aa26.93■■□□□ 1.9
Ccdc88a-202ENSMUST00000109477 Chpf2Q3UU43 768 aa26.92■■□□□ 1.9
Ccdc88a-202ENSMUST00000109477 Eif4a1P60843 406 aaKnown RBP26.91■■□□□ 1.9
Ccdc88a-202ENSMUST00000109477 Cyp2d12Q8BVD2 504 aa26.91■■□□□ 1.9
Ccdc88a-202ENSMUST00000109477 Kdm2bQ6P1G2 1309 aa26.91■■□□□ 1.9
Ccdc88a-202ENSMUST00000109477 Col1a2Q01149 1372 aa26.9■■□□□ 1.9
Ccdc88a-202ENSMUST00000109477 Asic4Q7TNS7 539 aa26.9■■□□□ 1.9
Ccdc88a-202ENSMUST00000109477 Ric3Q8BPM6 367 aa26.89■■□□□ 1.9
Ccdc88a-202ENSMUST00000109477 Duxf3A0A0N4SV92 674 aa26.88■■□□□ 1.89
Ccdc88a-202ENSMUST00000109477 Ccdc155Q80VJ8 648 aa26.88■■□□□ 1.89
Ccdc88a-202ENSMUST00000109477 Sv2bQ8BG39 683 aa26.87■■□□□ 1.89
Ccdc88a-202ENSMUST00000109477 Gm21663A0A0G2JE01 267 aa26.87■■□□□ 1.89
Ccdc88a-202ENSMUST00000109477 Gm7361D3Z6R1 267 aa26.87■■□□□ 1.89
Ccdc88a-202ENSMUST00000109477 5031410I06RikE9Q4E0 267 aa26.87■■□□□ 1.89
Ccdc88a-202ENSMUST00000109477 Gm1979E9QAN3 267 aa26.87■■□□□ 1.89
Ccdc88a-202ENSMUST00000109477 Gm5862K7N5V5 267 aa26.87■■□□□ 1.89
Ccdc88a-202ENSMUST00000109477 Gm10220K7N660 267 aa26.87■■□□□ 1.89
Ccdc88a-202ENSMUST00000109477 Nutm1Q8BHP2 1126 aa26.87■■□□□ 1.89
Ccdc88a-202ENSMUST00000109477 Slc5a1Q8C3K6 665 aa26.87■■□□□ 1.89
Ccdc88a-202ENSMUST00000109477 Tnnt1O88346 262 aa26.86■■□□□ 1.89
Ccdc88a-202ENSMUST00000109477 GakQ99KY4 1305 aa26.86■■□□□ 1.89
Ccdc88a-202ENSMUST00000109477 BcorQ8CGN4 1759 aa26.85■■□□□ 1.89
Ccdc88a-202ENSMUST00000109477 MvpQ9EQK5 861 aa26.85■■□□□ 1.89
Ccdc88a-202ENSMUST00000109477 Irx6Q9ER75 438 aa26.85■■□□□ 1.89
Ccdc88a-202ENSMUST00000109477 PappaQ8R4K8 1624 aa26.83■■□□□ 1.89
Ccdc88a-202ENSMUST00000109477 Chmp4bQ9D8B3 224 aaKnown RBP26.82■■□□□ 1.88
Ccdc88a-202ENSMUST00000109477 MpndQ3TV65 487 aa26.82■■□□□ 1.88
Ccdc88a-202ENSMUST00000109477 Ly75Q60767 1723 aa26.81■■□□□ 1.88
Ccdc88a-202ENSMUST00000109477 Ankrd44B2RXR6 993 aa26.81■■□□□ 1.88
Ccdc88a-202ENSMUST00000109477 Cnksr1A2A9K7 700 aa26.8■■□□□ 1.88
Ccdc88a-202ENSMUST00000109477 Anp32aO35381 247 aa26.8■■□□□ 1.88
Ccdc88a-202ENSMUST00000109477 Aifm3Q3TY86 605 aa26.8■■□□□ 1.88
Ccdc88a-202ENSMUST00000109477 1700123L14RikQ3V2K7 440 aa26.8■■□□□ 1.88
Ccdc88a-202ENSMUST00000109477 Slc4a3P16283 1227 aa26.79■■□□□ 1.88
Ccdc88a-202ENSMUST00000109477 Aplp1Q03157 653 aa26.79■■□□□ 1.88
Ccdc88a-202ENSMUST00000109477 Fam83gQ5SWY7 812 aa26.79■■□□□ 1.88
Ccdc88a-202ENSMUST00000109477 Ppp6r1Q7TSI3 856 aa26.79■■□□□ 1.88
Ccdc88a-202ENSMUST00000109477 Sugp2Q8CH09 1067 aa26.79■■□□□ 1.88
Ccdc88a-202ENSMUST00000109477 ApobrQ8VBT6 942 aa26.79■■□□□ 1.88
Ccdc88a-202ENSMUST00000109477 Supt16hQ920B9 1047 aa26.79■■□□□ 1.88
Ccdc88a-202ENSMUST00000109477 Zcrb1Q9CZ96 217 aaKnown RBP26.79■■□□□ 1.88
Ccdc88a-202ENSMUST00000109477 Kiaa0319Q5SZV5 1081 aa26.78■■□□□ 1.88
Ccdc88a-202ENSMUST00000109477 PsapQ61207 557 aaKnown RBP26.78■■□□□ 1.88
Ccdc88a-202ENSMUST00000109477 Ints5Q8CHT3 1018 aa26.78■■□□□ 1.88
Ccdc88a-202ENSMUST00000109477 Pnpla7A2AJ88 1352 aa26.78■■□□□ 1.88
Ccdc88a-202ENSMUST00000109477 Ccnl1Q52KE7 532 aaKnown RBP26.77■■□□□ 1.88
Ccdc88a-202ENSMUST00000109477 Bsdc1Q80Y55 427 aa26.77■■□□□ 1.88
Ccdc88a-202ENSMUST00000109477 Tmem119Q8R138 280 aa26.77■■□□□ 1.88
Ccdc88a-202ENSMUST00000109477 GckrQ91X44 587 aa26.76■■□□□ 1.88
Ccdc88a-202ENSMUST00000109477 Fkbp4P30416 458 aa26.76■■□□□ 1.87
Ccdc88a-202ENSMUST00000109477 Lrit1Q8K099 624 aa26.76■■□□□ 1.87
Ccdc88a-202ENSMUST00000109477 Taf7Q9R1C0 341 aa26.76■■□□□ 1.87
Ccdc88a-202ENSMUST00000109477 Crb1Q8VHS2 1405 aa26.74■■□□□ 1.87
Ccdc88a-202ENSMUST00000109477 Ubap1lG3UW59 384 aa26.74■■□□□ 1.87
Ccdc88a-202ENSMUST00000109477 CoilQ5SU73 570 aa26.74■■□□□ 1.87
Ccdc88a-202ENSMUST00000109477 Ppfibp2O35711 882 aa26.73■■□□□ 1.87
Ccdc88a-202ENSMUST00000109477 Rlbp1Q9Z275 317 aa26.73■■□□□ 1.87
Ccdc88a-202ENSMUST00000109477 Tiam2Q6ZPF3 1715 aa26.73■■□□□ 1.87
Ccdc88a-202ENSMUST00000109477 Iqsec3Q3TES0 1195 aa26.73■■□□□ 1.87
Ccdc88a-202ENSMUST00000109477 TefQ9JLC6 301 aa26.73■■□□□ 1.87
Ccdc88a-202ENSMUST00000109477 Tjp1P39447 1745 aaKnown RBP26.72■■□□□ 1.87
Ccdc88a-202ENSMUST00000109477 Smc5Q8CG46 1101 aaKnown RBP26.72■■□□□ 1.87
Ccdc88a-202ENSMUST00000109477 Aldh1l2Q8K009 923 aa26.72■■□□□ 1.87
Ccdc88a-202ENSMUST00000109477 Disp3A3KFU9 1347 aa26.7■■□□□ 1.86
Ccdc88a-202ENSMUST00000109477 Nolc1E9Q5C9 702 aaKnown RBP26.7■■□□□ 1.86
Ccdc88a-202ENSMUST00000109477 Efcab2Q9CQ46 164 aa26.7■■□□□ 1.86
Ccdc88a-202ENSMUST00000109477 Bcl2l13P59017 434 aa26.68■■□□□ 1.86
Ccdc88a-202ENSMUST00000109477 AceP09470 1312 aa26.68■■□□□ 1.86
Ccdc88a-202ENSMUST00000109477 Rps6ka4Q9Z2B9 773 aa26.68■■□□□ 1.86
Ccdc88a-202ENSMUST00000109477 GalcP54818 684 aa26.67■■□□□ 1.86
Ccdc88a-202ENSMUST00000109477 Phf23Q8BSN5 401 aa26.67■■□□□ 1.86
Ccdc88a-202ENSMUST00000109477 Afg3l2Q8JZQ2 802 aaKnown RBP26.67■■□□□ 1.86
Ccdc88a-202ENSMUST00000109477 Echdc1Q9D9V3 322 aa26.67■■□□□ 1.86
Ccdc88a-202ENSMUST00000109477 Rgs17Q9QZB0 210 aa26.67■■□□□ 1.86
Ccdc88a-202ENSMUST00000109477 Hdac6Q9Z2V5 1149 aa26.67■■□□□ 1.86
Ccdc88a-202ENSMUST00000109477 Cnnm1Q0GA42 951 aa26.66■■□□□ 1.86
Ccdc88a-202ENSMUST00000109477 Morc2aQ69ZX6 1030 aa26.66■■□□□ 1.86
Ccdc88a-202ENSMUST00000109477 SympkQ80X82 1284 aa26.66■■□□□ 1.86
Ccdc88a-202ENSMUST00000109477 Pdia6Q922R8 440 aaKnown RBP26.66■■□□□ 1.86
Ccdc88a-202ENSMUST00000109477 Shank3Q4ACU6 1730 aa26.65■■□□□ 1.86
Ccdc88a-202ENSMUST00000109477 Hs1bp3Q3TC93 395 aa26.65■■□□□ 1.86
Ccdc88a-202ENSMUST00000109477 Cyp2d11P24457 504 aa26.64■■□□□ 1.85
Ccdc88a-202ENSMUST00000109477 Arhgap33Q80YF9 1305 aa26.64■■□□□ 1.85
Ccdc88a-202ENSMUST00000109477 Chmp5Q9D7S9 219 aa26.63■■□□□ 1.85
Ccdc88a-202ENSMUST00000109477 PigbQ9JJQ0 542 aa26.62■■□□□ 1.85
Ccdc88a-202ENSMUST00000109477 Col22a1E9Q7P1 1613 aa26.62■■□□□ 1.85
Ccdc88a-202ENSMUST00000109477 Fgd1P52734 960 aa26.62■■□□□ 1.85
Ccdc88a-202ENSMUST00000109477 Flad1Q8R123 492 aa26.62■■□□□ 1.85
Ccdc88a-202ENSMUST00000109477 Atg3Q9CPX6 314 aa26.62■■□□□ 1.85
Ccdc88a-202ENSMUST00000109477 Sos2Q02384 1333 aa26.61■■□□□ 1.85
Ccdc88a-202ENSMUST00000109477 Flt4P35917 1363 aa26.61■■□□□ 1.85
Ccdc88a-202ENSMUST00000109477 CenpbP27790 599 aa26.6■■□□□ 1.85
Ccdc88a-202ENSMUST00000109477 Cluap1Q8R3P7 413 aa26.6■■□□□ 1.85
Ccdc88a-202ENSMUST00000109477 Klc3Q91W40 508 aa26.6■■□□□ 1.85
Ccdc88a-202ENSMUST00000109477 Armcx1Q9CX83 456 aa26.6■■□□□ 1.85
Ccdc88a-202ENSMUST00000109477 Abca3Q8R420 1704 aa26.6■■□□□ 1.85
Ccdc88a-202ENSMUST00000109477 Atl3Q91YH5 541 aa26.59■■□□□ 1.85
Retrieved 100 of 22,080 RNA–protein pairs in 30.6 ms