RNA–Protein interactions for RNA: ENSMUST00000069174.5

Trim23-202, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

TSL 1 (best) BASIC

Gene Trim23, Length 4,258 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-202ENSMUST00000069174 Tet3Q8BG87 1668 aa6.5□□□□□ -1.37
Trim23-202ENSMUST00000069174 Hmgb2P30681 210 aaKnown RBP6.49□□□□□ -1.37
Trim23-202ENSMUST00000069174 Bsdc1Q80Y55 427 aa6.49□□□□□ -1.37
Trim23-202ENSMUST00000069174 Ppp1r37Q8BKR5 712 aa6.49□□□□□ -1.37
Trim23-202ENSMUST00000069174 Usp16Q99LG0 825 aa6.49□□□□□ -1.37
Trim23-202ENSMUST00000069174 TefQ9JLC6 301 aa6.49□□□□□ -1.37
Trim23-202ENSMUST00000069174 Lrp6O88572 1613 aa6.49□□□□□ -1.37
Trim23-202ENSMUST00000069174 Cnnm1Q0GA42 951 aa6.49□□□□□ -1.37
Trim23-202ENSMUST00000069174 Pdzd9Q9D9M4 266 aa6.49□□□□□ -1.37
Trim23-202ENSMUST00000069174 Marf1Q8BJ34 1730 aaKnown RBP6.48□□□□□ -1.37
Trim23-202ENSMUST00000069174 Map2P20357 1828 aa6.48□□□□□ -1.37
Trim23-202ENSMUST00000069174 Nsd3Q6P2L6 1439 aa6.48□□□□□ -1.37
Trim23-202ENSMUST00000069174 Bcl2l13P59017 434 aa6.48□□□□□ -1.37
Trim23-202ENSMUST00000069174 B4galnt3Q6L8S8 986 aa6.48□□□□□ -1.37
Trim23-202ENSMUST00000069174 Asic4Q7TNS7 539 aa6.48□□□□□ -1.37
Trim23-202ENSMUST00000069174 Kiaa1107Q80TK0 1369 aa6.48□□□□□ -1.37
Trim23-202ENSMUST00000069174 Slit1Q80TR4 1531 aa6.48□□□□□ -1.37
Trim23-202ENSMUST00000069174 Kcnh4A2A5F7 1018 aa6.48□□□□□ -1.37
Trim23-202ENSMUST00000069174 Larp1Q6ZQ58 1072 aaKnown RBP6.48□□□□□ -1.37
Trim23-202ENSMUST00000069174 Ccar1Q8CH18 1146 aaKnown RBP6.48□□□□□ -1.37
Trim23-202ENSMUST00000069174 Siglec1Q62230 1695 aa6.48□□□□□ -1.37
Trim23-202ENSMUST00000069174 Ubr1O70481 1757 aa6.48□□□□□ -1.37
Trim23-202ENSMUST00000069174 Nhsl1Q8CAF4 1587 aa6.48□□□□□ -1.37
Trim23-202ENSMUST00000069174 Rbm25B2RY56 838 aaKnown RBP6.47□□□□□ -1.37
Trim23-202ENSMUST00000069174 Irf6P97431 467 aa6.47□□□□□ -1.37
Trim23-202ENSMUST00000069174 Ccdc30Q8BVF4 654 aa6.47□□□□□ -1.37
Trim23-202ENSMUST00000069174 Sos1Q62245 1319 aa6.47□□□□□ -1.37
Trim23-202ENSMUST00000069174 Flad1Q8R123 492 aa6.47□□□□□ -1.37
Trim23-202ENSMUST00000069174 Cdc37l1Q9CZP7 335 aa6.47□□□□□ -1.37
Trim23-202ENSMUST00000069174 Kdm2bQ6P1G2 1309 aa6.47□□□□□ -1.37
Trim23-202ENSMUST00000069174 Mst1rQ62190 1378 aa6.47□□□□□ -1.37
Trim23-202ENSMUST00000069174 Abca15E9PWH4 1668 aa6.47□□□□□ -1.37
Trim23-202ENSMUST00000069174 Snap23O09044 210 aa6.46□□□□□ -1.37
Trim23-202ENSMUST00000069174 Fkbp4P30416 458 aa6.46□□□□□ -1.37
Trim23-202ENSMUST00000069174 Efcab2Q9CQ46 164 aa6.46□□□□□ -1.37
Trim23-202ENSMUST00000069174 Scn7aB1AYL1 1681 aa6.46□□□□□ -1.38
Trim23-202ENSMUST00000069174 GalcP54818 684 aa6.46□□□□□ -1.38
Trim23-202ENSMUST00000069174 Uspl1Q3ULM6 1089 aa6.46□□□□□ -1.38
Trim23-202ENSMUST00000069174 Tmco5bQ80X59 307 aa6.46□□□□□ -1.38
Trim23-202ENSMUST00000069174 Ppm1fQ8CGA0 452 aa6.46□□□□□ -1.38
Trim23-202ENSMUST00000069174 Pde4dQ01063 747 aa6.46□□□□□ -1.38
Trim23-202ENSMUST00000069174 Apbb1Q9QXJ1 710 aa6.46□□□□□ -1.38
Trim23-202ENSMUST00000069174 Gtf2a1Q99PM3 378 aa6.45□□□□□ -1.38
Trim23-202ENSMUST00000069174 Smarcc1P97496 1104 aa6.45□□□□□ -1.38
Trim23-202ENSMUST00000069174 Ccdc60Q8C4J0 545 aa6.45□□□□□ -1.38
Trim23-202ENSMUST00000069174 Atxn3Q9CVD2 355 aa6.45□□□□□ -1.38
Trim23-202ENSMUST00000069174 PsapQ61207 557 aaKnown RBP6.45□□□□□ -1.38
Trim23-202ENSMUST00000069174 Hdac6Q9Z2V5 1149 aa6.45□□□□□ -1.38
Trim23-202ENSMUST00000069174 Q4VA45 678 aa6.44□□□□□ -1.38
Trim23-202ENSMUST00000069174 Pim2Q62070 370 aa6.44□□□□□ -1.38
Trim23-202ENSMUST00000069174 OscarQ8VBT3 265 aa6.44□□□□□ -1.38
Trim23-202ENSMUST00000069174 Zfp444Q3TDV8 331 aaKnown RBP6.44□□□□□ -1.38
Trim23-202ENSMUST00000069174 Arhgap33Q80YF9 1305 aa6.44□□□□□ -1.38
Trim23-202ENSMUST00000069174 Prim1P20664 417 aa6.44□□□□□ -1.38
Trim23-202ENSMUST00000069174 Klhdc4Q921I2 584 aa6.44□□□□□ -1.38
Trim23-202ENSMUST00000069174 Ccdc96Q9CR92 584 aa6.44□□□□□ -1.38
Trim23-202ENSMUST00000069174 Rapgef4Q9EQZ6 1011 aa6.44□□□□□ -1.38
Trim23-202ENSMUST00000069174 GapdhsQ64467 440 aa6.43□□□□□ -1.38
Trim23-202ENSMUST00000069174 Shank2Q80Z38 1476 aa6.43□□□□□ -1.38
Trim23-202ENSMUST00000069174 Gnl3lQ6PGG6 577 aaKnown RBP6.43□□□□□ -1.38
Trim23-202ENSMUST00000069174 Ssfa2Q922B9 1252 aa6.43□□□□□ -1.38
Trim23-202ENSMUST00000069174 Cypt2Q6P924 180 aa6.43□□□□□ -1.38
Trim23-202ENSMUST00000069174 Afg3l2Q8JZQ2 802 aaKnown RBP6.43□□□□□ -1.38
Trim23-202ENSMUST00000069174 Lrit1Q8K099 624 aa6.43□□□□□ -1.38
Trim23-202ENSMUST00000069174 Rps6ka4Q9Z2B9 773 aa6.43□□□□□ -1.38
Trim23-202ENSMUST00000069174 Abcc12Q80WJ6 1366 aa6.42□□□□□ -1.38
Trim23-202ENSMUST00000069174 G3bp1P97855 465 aaKnown RBP6.42□□□□□ -1.38
Trim23-202ENSMUST00000069174 Gtpbp6Q3U6U5 514 aa6.42□□□□□ -1.38
Trim23-202ENSMUST00000069174 Chpf2Q3UU43 768 aa6.42□□□□□ -1.38
Trim23-202ENSMUST00000069174 AceP09470 1312 aa6.42□□□□□ -1.38
Trim23-202ENSMUST00000069174 Aox2Q5SGK3 1345 aa6.42□□□□□ -1.38
Trim23-202ENSMUST00000069174 GakQ99KY4 1305 aa6.42□□□□□ -1.38
Trim23-202ENSMUST00000069174 Jdp2P97875 163 aa6.42□□□□□ -1.38
Trim23-202ENSMUST00000069174 Vars2Q3U2A8 1060 aa6.42□□□□□ -1.38
Trim23-202ENSMUST00000069174 Eif4g2Q62448 906 aaKnown RBP6.42□□□□□ -1.38
Trim23-202ENSMUST00000069174 4930523C07RikE9Q2T4 99 aa6.42□□□□□ -1.38
Trim23-202ENSMUST00000069174 Dcaf5Q80T85 946 aa6.42□□□□□ -1.38
Trim23-202ENSMUST00000069174 Sv2bQ8BG39 683 aa6.42□□□□□ -1.38
Trim23-202ENSMUST00000069174 Miga2Q8BK03 593 aa6.42□□□□□ -1.38
Trim23-202ENSMUST00000069174 Rrp9Q91WM3 475 aaKnown RBP6.42□□□□□ -1.38
Trim23-202ENSMUST00000069174 Mdc1Q5PSV9 1707 aa6.41□□□□□ -1.38
Trim23-202ENSMUST00000069174 Ccdc85cE9Q6B2 420 aa6.41□□□□□ -1.38
Trim23-202ENSMUST00000069174 Znf330Q922H9 316 aa6.41□□□□□ -1.38
Trim23-202ENSMUST00000069174 Rwdd1Q9CQK7 243 aa6.41□□□□□ -1.38
Trim23-202ENSMUST00000069174 Nip7Q9CXK8 180 aaKnown RBP6.41□□□□□ -1.38
Trim23-202ENSMUST00000069174 Ptpn23Q6PB44 1692 aa6.41□□□□□ -1.38
Trim23-202ENSMUST00000069174 Cacna1sQ02789 1880 aa6.41□□□□□ -1.38
Trim23-202ENSMUST00000069174 Strn4P58404 760 aa6.41□□□□□ -1.38
Trim23-202ENSMUST00000069174 HomezQ80W88 542 aa6.41□□□□□ -1.38
Trim23-202ENSMUST00000069174 WdpcpQ8C456 722 aa6.41□□□□□ -1.38
Trim23-202ENSMUST00000069174 Usp19Q3UJD6 1360 aa6.41□□□□□ -1.38
Trim23-202ENSMUST00000069174 Tnrc6cQ3UHC0 1690 aaKnown RBP6.41□□□□□ -1.38
Trim23-202ENSMUST00000069174 DaxxO35613 739 aa6.41□□□□□ -1.38
Trim23-202ENSMUST00000069174 GckrQ91X44 587 aa6.41□□□□□ -1.38
Trim23-202ENSMUST00000069174 Cap2Q9CYT6 476 aa6.41□□□□□ -1.38
Trim23-202ENSMUST00000069174 Ccdc171E9Q1U1 1324 aa6.41□□□□□ -1.38
Trim23-202ENSMUST00000069174 Nwd2Q6P5U7 1742 aa6.4□□□□□ -1.38
Trim23-202ENSMUST00000069174 Erich4Q3UNU4 136 aa6.4□□□□□ -1.38
Trim23-202ENSMUST00000069174 Ccdc27Q3V036 639 aa6.4□□□□□ -1.38
Trim23-202ENSMUST00000069174 Tnnt3Q9QZ47 272 aa6.4□□□□□ -1.38
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms