RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 NalcnQ8BXR5 1738 aa23.22■■□□□ 1.31
Ccdc50-201ENSMUST00000039443 Sirt1Q923E4 737 aa23.22■■□□□ 1.31
Ccdc50-201ENSMUST00000039443 Smarce1O54941 411 aaKnown RBP23.21■■□□□ 1.31
Ccdc50-201ENSMUST00000039443 Stk11ipQ3TAA7 1072 aa23.21■■□□□ 1.31
Ccdc50-201ENSMUST00000039443 Noc3lQ8VI84 807 aaKnown RBP23.21■■□□□ 1.31
Ccdc50-201ENSMUST00000039443 Pik3c2bE9QAN8 1632 aa23.21■■□□□ 1.31
Ccdc50-201ENSMUST00000039443 Rtf1A2AQ19 715 aaKnown RBP23.21■■□□□ 1.31
Ccdc50-201ENSMUST00000039443 TmpoQ61033 693 aaKnown RBP23.21■■□□□ 1.31
Ccdc50-201ENSMUST00000039443 Sv2bQ8BG39 683 aa23.21■■□□□ 1.31
Ccdc50-201ENSMUST00000039443 Gnai2P08752 355 aaKnown RBP23.2■■□□□ 1.3
Ccdc50-201ENSMUST00000039443 1700019A02RikA0A087WPV9 146 aa23.2■■□□□ 1.3
Ccdc50-201ENSMUST00000039443 Gm45015A0A140LII9 184 aa23.2■■□□□ 1.3
Ccdc50-201ENSMUST00000039443 Gm18336A0A140LIU8 765 aa23.2■■□□□ 1.3
Ccdc50-201ENSMUST00000039443 Kif4P33174 1231 aa23.2■■□□□ 1.3
Ccdc50-201ENSMUST00000039443 Znf692Q3U381 531 aa23.2■■□□□ 1.3
Ccdc50-201ENSMUST00000039443 Nol8Q3UHX0 1147 aaKnown RBP23.2■■□□□ 1.3
Ccdc50-201ENSMUST00000039443 CemipQ8BI06 1361 aa23.19■■□□□ 1.3
Ccdc50-201ENSMUST00000039443 Plin1Q8CGN5 517 aa23.19■■□□□ 1.3
Ccdc50-201ENSMUST00000039443 Gripap1Q8VD04 806 aa23.19■■□□□ 1.3
Ccdc50-201ENSMUST00000039443 Nphp1Q9QY53 687 aa23.19■■□□□ 1.3
Ccdc50-201ENSMUST00000039443 Filip1lQ6P6L0 1131 aa23.18■■□□□ 1.3
Ccdc50-201ENSMUST00000039443 St18Q80TY4 1045 aa23.18■■□□□ 1.3
Ccdc50-201ENSMUST00000039443 Kdm4aQ8BW72 1064 aa23.18■■□□□ 1.3
Ccdc50-201ENSMUST00000039443 Slain2Q8CI08 581 aa23.18■■□□□ 1.3
Ccdc50-201ENSMUST00000039443 Igsf1Q7TQA1 1317 aa23.18■■□□□ 1.3
Ccdc50-201ENSMUST00000039443 Gm9992B2RWK3 458 aa23.18■■□□□ 1.3
Ccdc50-201ENSMUST00000039443 Gse1Q3U3C9 1213 aa23.18■■□□□ 1.3
Ccdc50-201ENSMUST00000039443 Unc93aQ710D3 458 aa23.18■■□□□ 1.3
Ccdc50-201ENSMUST00000039443 Gdpd2Q9ESM6 539 aa23.16■■□□□ 1.3
Ccdc50-201ENSMUST00000039443 Bcar3Q9QZK2 820 aa23.16■■□□□ 1.3
Ccdc50-201ENSMUST00000039443 RestQ8VIG1 1082 aa23.16■■□□□ 1.3
Ccdc50-201ENSMUST00000039443 C3P01027 1663 aa23.15■■□□□ 1.3
Ccdc50-201ENSMUST00000039443 C5P06684 1680 aa23.15■■□□□ 1.3
Ccdc50-201ENSMUST00000039443 Ptpn23Q6PB44 1692 aa23.15■■□□□ 1.3
Ccdc50-201ENSMUST00000039443 Gm10563F6WIE4 79 aa23.15■■□□□ 1.3
Ccdc50-201ENSMUST00000039443 Ptpdc1Q6NZK8 747 aa23.15■■□□□ 1.3
Ccdc50-201ENSMUST00000039443 N4bp2F8VQG7 1678 aaKnown RBP23.14■■□□□ 1.3
Ccdc50-201ENSMUST00000039443 Als2Q920R0 1651 aa23.14■■□□□ 1.3
Ccdc50-201ENSMUST00000039443 Stk36Q69ZM6 1316 aa23.14■■□□□ 1.29
Ccdc50-201ENSMUST00000039443 Trpm3Q5F4S9 1721 aa23.14■■□□□ 1.29
Ccdc50-201ENSMUST00000039443 KinQ8K339 391 aa23.13■■□□□ 1.29
Ccdc50-201ENSMUST00000039443 FancaQ9JL70 1439 aa23.13■■□□□ 1.29
Ccdc50-201ENSMUST00000039443 Syce3B5KM66 88 aa23.13■■□□□ 1.29
Ccdc50-201ENSMUST00000039443 Mmp8O70138 465 aa23.13■■□□□ 1.29
Ccdc50-201ENSMUST00000039443 Srgap3Q812A2 1099 aa23.13■■□□□ 1.29
Ccdc50-201ENSMUST00000039443 Evi5lH3BKQ3 813 aa23.12■■□□□ 1.29
Ccdc50-201ENSMUST00000039443 Ggnbp2Q5SV77 696 aa23.12■■□□□ 1.29
Ccdc50-201ENSMUST00000039443 Ddx19aQ61655 478 aaKnown RBP23.12■■□□□ 1.29
Ccdc50-201ENSMUST00000039443 Rcan3Q9JKK0 239 aa23.12■■□□□ 1.29
Ccdc50-201ENSMUST00000039443 Amigo3Q8C2S7 508 aa23.11■■□□□ 1.29
Ccdc50-201ENSMUST00000039443 Strn4P58404 760 aa23.11■■□□□ 1.29
Ccdc50-201ENSMUST00000039443 Ppp1r42Q8R1Z4 357 aa23.11■■□□□ 1.29
Ccdc50-201ENSMUST00000039443 Atp8b2P98199 1209 aa23.1■■□□□ 1.29
Ccdc50-201ENSMUST00000039443 Rtn4Q99P72 1162 aaKnown RBP23.1■■□□□ 1.29
Ccdc50-201ENSMUST00000039443 Msh6P54276 1358 aaKnown RBP23.1■■□□□ 1.29
Ccdc50-201ENSMUST00000039443 Hsp90b1P08113 802 aaKnown RBP23.09■■□□□ 1.29
Ccdc50-201ENSMUST00000039443 Hmox1P14901 289 aa23.09■■□□□ 1.29
Ccdc50-201ENSMUST00000039443 Ccdc173A0JLY1 547 aa23.08■■□□□ 1.29
Ccdc50-201ENSMUST00000039443 Pibf1E9Q6K3 756 aa23.08■■□□□ 1.29
Ccdc50-201ENSMUST00000039443 Ccdc7Q9D541 371 aa23.08■■□□□ 1.29
Ccdc50-201ENSMUST00000039443 Nol11Q8BJW5 723 aaKnown RBP23.08■■□□□ 1.29
Ccdc50-201ENSMUST00000039443 Ubr1O70481 1757 aa23.07■■□□□ 1.28
Ccdc50-201ENSMUST00000039443 Zscan25B2RX31 543 aa23.07■■□□□ 1.28
Ccdc50-201ENSMUST00000039443 Pdia4P08003 638 aaKnown RBP23.07■■□□□ 1.28
Ccdc50-201ENSMUST00000039443 Mcmdc2E9Q956 681 aa23.06■■□□□ 1.28
Ccdc50-201ENSMUST00000039443 Gadd45bP22339 160 aa23.06■■□□□ 1.28
Ccdc50-201ENSMUST00000039443 Rad17Q6NXW6 688 aa23.06■■□□□ 1.28
Ccdc50-201ENSMUST00000039443 Ripk4Q9ERK0 786 aa23.06■■□□□ 1.28
Ccdc50-201ENSMUST00000039443 Phactr2B1AVP0 632 aa23.05■■□□□ 1.28
Ccdc50-201ENSMUST00000039443 Fam184aE9PW83 1143 aa23.05■■□□□ 1.28
Ccdc50-201ENSMUST00000039443 Mum1Q6DID5 682 aa23.05■■□□□ 1.28
Ccdc50-201ENSMUST00000039443 Parp14Q2EMV9 1817 aa23.04■■□□□ 1.28
Ccdc50-201ENSMUST00000039443 Prim1P20664 417 aa23.04■■□□□ 1.28
Ccdc50-201ENSMUST00000039443 EvcP57680 1005 aa23.04■■□□□ 1.28
Ccdc50-201ENSMUST00000039443 Q3TQI7 289 aaKnown RBP23.04■■□□□ 1.28
Ccdc50-201ENSMUST00000039443 Utp18Q5SSI6 552 aaKnown RBP23.04■■□□□ 1.28
Ccdc50-201ENSMUST00000039443 Ints3Q7TPD0 1041 aaKnown RBP23.04■■□□□ 1.28
Ccdc50-201ENSMUST00000039443 Foxp4Q9DBY0 795 aaKnown RBP23.04■■□□□ 1.28
Ccdc50-201ENSMUST00000039443 Scn7aB1AYL1 1681 aa23.04■■□□□ 1.28
Ccdc50-201ENSMUST00000039443 Sipa1l2Q80TE4 1722 aa23.04■■□□□ 1.28
Ccdc50-201ENSMUST00000039443 Map2P20357 1828 aa23.04■■□□□ 1.28
Ccdc50-201ENSMUST00000039443 Myo5bP21271 1818 aa23.04■■□□□ 1.28
Ccdc50-201ENSMUST00000039443 Abcc10Q8R4P9 1501 aa23.04■■□□□ 1.28
Ccdc50-201ENSMUST00000039443 Prune1Q8BIW1 454 aa23.03■■□□□ 1.28
Ccdc50-201ENSMUST00000039443 Cc2d1aQ8K1A6 943 aa23.03■■□□□ 1.28
Ccdc50-201ENSMUST00000039443 Erbb4Q61527 1308 aa23.03■■□□□ 1.28
Ccdc50-201ENSMUST00000039443 Brinp3Q499E0 766 aa23.03■■□□□ 1.28
Ccdc50-201ENSMUST00000039443 Mknk2Q8CDB0 459 aa23.03■■□□□ 1.28
Ccdc50-201ENSMUST00000039443 Col16a1Q8BLX7 1580 aa23.03■■□□□ 1.28
Ccdc50-201ENSMUST00000039443 Idi1P58044 227 aa23.02■■□□□ 1.28
Ccdc50-201ENSMUST00000039443 Fam83gQ5SWY7 812 aa23.02■■□□□ 1.28
Ccdc50-201ENSMUST00000039443 Atf3Q60765 181 aa23.02■■□□□ 1.28
Ccdc50-201ENSMUST00000039443 Anp32cQ64G17 123 aa23.01■■□□□ 1.27
Ccdc50-201ENSMUST00000039443 Pik3c2aQ61194 1686 aa23.01■■□□□ 1.27
Ccdc50-201ENSMUST00000039443 Mindy4Q3UQI9 744 aa23.01■■□□□ 1.27
Ccdc50-201ENSMUST00000039443 Gzf1Q4VBD9 706 aa23■■□□□ 1.27
Ccdc50-201ENSMUST00000039443 Tbc1d30Q69ZT9 766 aa23■■□□□ 1.27
Ccdc50-201ENSMUST00000039443 SrrtQ99MR6 875 aaKnown RBP23■■□□□ 1.27
Ccdc50-201ENSMUST00000039443 Pnma3Q8JZW8 466 aa23■■□□□ 1.27
Ccdc50-201ENSMUST00000039443 NcapgE9PWG6 1004 aa22.99■■□□□ 1.27
Retrieved 100 of 22,080 RNA–protein pairs in 56.5 ms