RNA–Protein interactions for RNA: ENSMUST00000034388.9

Vps4a-201, Transcript of Vacuolar protein sorting-associated protein 4A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps4a, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4a-201ENSMUST00000034388 Bcar3Q9QZK2 820 aa21.32■■□□□ 1
Vps4a-201ENSMUST00000034388 Tnrc6bQ8BKI2 1810 aaKnown RBP21.32■■□□□ 1
Vps4a-201ENSMUST00000034388 RestQ8VIG1 1082 aa21.31■■□□□ 1
Vps4a-201ENSMUST00000034388 CemipQ8BI06 1361 aa21.31■■□□□ 1
Vps4a-201ENSMUST00000034388 Syce3B5KM66 88 aa21.31■■□□□ 1
Vps4a-201ENSMUST00000034388 Znf316Q6PGE4 1016 aa21.31■■□□□ 1
Vps4a-201ENSMUST00000034388 Rims2Q9EQZ7 1530 aa21.3■■□□□ 1
Vps4a-201ENSMUST00000034388 Pdia4P08003 638 aaKnown RBP21.3■■□□□ 1
Vps4a-201ENSMUST00000034388 Ptpdc1Q6NZK8 747 aa21.3■■□□□ 1
Vps4a-201ENSMUST00000034388 1700019A02RikA0A087WPV9 146 aa21.29■■□□□ 1
Vps4a-201ENSMUST00000034388 Ddx19aQ61655 478 aaKnown RBP21.29■■□□□ 1
Vps4a-201ENSMUST00000034388 Pik3c2bE9QAN8 1632 aa21.29■■□□□ 1
Vps4a-201ENSMUST00000034388 NalcnQ8BXR5 1738 aa21.29■■□□□ 1
Vps4a-201ENSMUST00000034388 Zscan25B2RX31 543 aa21.29■■□□□ 1
Vps4a-201ENSMUST00000034388 Mknk2Q8CDB0 459 aa21.29■■□□□ 1
Vps4a-201ENSMUST00000034388 KinQ8K339 391 aa21.29■■□□□ 1
Vps4a-201ENSMUST00000034388 Erbb4Q61527 1308 aa21.28■■□□□ 1
Vps4a-201ENSMUST00000034388 Scn4aQ9ER60 1841 aa21.28■■□□□ 1
Vps4a-201ENSMUST00000034388 Plin1Q8CGN5 517 aa21.28■■□□□ 1
Vps4a-201ENSMUST00000034388 Stk36Q69ZM6 1316 aa21.28■■□□□ 1
Vps4a-201ENSMUST00000034388 Lmtk3Q5XJV6 1424 aa21.27■■□□□ 1
Vps4a-201ENSMUST00000034388 Ccdc173A0JLY1 547 aa21.27■■□□□ 1
Vps4a-201ENSMUST00000034388 Mmp8O70138 465 aa21.27■■□□□ 1
Vps4a-201ENSMUST00000034388 Strn4P58404 760 aa21.27■■□□□ 1
Vps4a-201ENSMUST00000034388 Ccdc7Q9D541 371 aa21.27■■□□□ 1
Vps4a-201ENSMUST00000034388 Atp8b2P98199 1209 aa21.27■■□□□ 1
Vps4a-201ENSMUST00000034388 Nol11Q8BJW5 723 aaKnown RBP21.27■■□□□ 1
Vps4a-201ENSMUST00000034388 Tbc1d30Q69ZT9 766 aa21.26■□□□□ 0.99
Vps4a-201ENSMUST00000034388 Srgap3Q812A2 1099 aa21.26■□□□□ 0.99
Vps4a-201ENSMUST00000034388 Asxl2Q8BZ32 1370 aa21.26■□□□□ 0.99
Vps4a-201ENSMUST00000034388 FancaQ9JL70 1439 aa21.26■□□□□ 0.99
Vps4a-201ENSMUST00000034388 IghaA0A0A6YXW6 389 aa21.26■□□□□ 0.99
Vps4a-201ENSMUST00000034388 Gadd45bP22339 160 aa21.26■□□□□ 0.99
Vps4a-201ENSMUST00000034388 Nom1Q3UFM5 854 aaKnown RBP21.26■□□□□ 0.99
Vps4a-201ENSMUST00000034388 Ppp1r42Q8R1Z4 357 aa21.26■□□□□ 0.99
Vps4a-201ENSMUST00000034388 Msh6P54276 1358 aaKnown RBP21.25■□□□□ 0.99
Vps4a-201ENSMUST00000034388 Phlpp1Q8CHE4 1687 aa21.25■□□□□ 0.99
Vps4a-201ENSMUST00000034388 Pnma3Q8JZW8 466 aa21.25■□□□□ 0.99
Vps4a-201ENSMUST00000034388 Fam184aE9PW83 1143 aa21.24■□□□□ 0.99
Vps4a-201ENSMUST00000034388 Mum1Q6DID5 682 aa21.24■□□□□ 0.99
Vps4a-201ENSMUST00000034388 Pip4k2bQ80XI4 416 aa21.24■□□□□ 0.99
Vps4a-201ENSMUST00000034388 Mindy4Q3UQI9 744 aa21.24■□□□□ 0.99
Vps4a-201ENSMUST00000034388 Ggnbp2Q5SV77 696 aa21.24■□□□□ 0.99
Vps4a-201ENSMUST00000034388 Anp32cQ64G17 123 aa21.24■□□□□ 0.99
Vps4a-201ENSMUST00000034388 PzpQ61838 1495 aa21.24■□□□□ 0.99
Vps4a-201ENSMUST00000034388 Trpm3Q5F4S9 1721 aa21.24■□□□□ 0.99
Vps4a-201ENSMUST00000034388 Hmox1P14901 289 aa21.23■□□□□ 0.99
Vps4a-201ENSMUST00000034388 Gzf1Q4VBD9 706 aa21.23■□□□□ 0.99
Vps4a-201ENSMUST00000034388 Utp18Q5SSI6 552 aaKnown RBP21.23■□□□□ 0.99
Vps4a-201ENSMUST00000034388 Slit3Q9WVB4 1523 aa21.23■□□□□ 0.99
Vps4a-201ENSMUST00000034388 NcapgE9PWG6 1004 aa21.22■□□□□ 0.99
Vps4a-201ENSMUST00000034388 Mcmdc2E9Q956 681 aa21.22■□□□□ 0.99
Vps4a-201ENSMUST00000034388 Rbm10Q99KG3 930 aaKnown RBP21.22■□□□□ 0.99
Vps4a-201ENSMUST00000034388 Hsp90b1P08113 802 aaKnown RBP21.21■□□□□ 0.99
Vps4a-201ENSMUST00000034388 EvcP57680 1005 aa21.21■□□□□ 0.99
Vps4a-201ENSMUST00000034388 Phactr2B1AVP0 632 aa21.21■□□□□ 0.99
Vps4a-201ENSMUST00000034388 Tbc1d31Q6NXY1 996 aa21.21■□□□□ 0.99
Vps4a-201ENSMUST00000034388 Ptpn23Q6PB44 1692 aa21.21■□□□□ 0.99
Vps4a-201ENSMUST00000034388 Ints3Q7TPD0 1041 aaKnown RBP21.2■□□□□ 0.98
Vps4a-201ENSMUST00000034388 Prune1Q8BIW1 454 aa21.2■□□□□ 0.98
Vps4a-201ENSMUST00000034388 Foxp4Q9DBY0 795 aaKnown RBP21.2■□□□□ 0.98
Vps4a-201ENSMUST00000034388 Pank2Q3U4S0 443 aa21.2■□□□□ 0.98
Vps4a-201ENSMUST00000034388 Pibf1E9Q6K3 756 aa21.19■□□□□ 0.98
Vps4a-201ENSMUST00000034388 SrrtQ99MR6 875 aaKnown RBP21.19■□□□□ 0.98
Vps4a-201ENSMUST00000034388 N4bp2F8VQG7 1678 aaKnown RBP21.19■□□□□ 0.98
Vps4a-201ENSMUST00000034388 Prim1P20664 417 aa21.19■□□□□ 0.98
Vps4a-201ENSMUST00000034388 Rbm27Q5SFM8 1060 aaKnown RBP21.19■□□□□ 0.98
Vps4a-201ENSMUST00000034388 Rad17Q6NXW6 688 aa21.19■□□□□ 0.98
Vps4a-201ENSMUST00000034388 E4f1Q8CCE9 783 aa21.19■□□□□ 0.98
Vps4a-201ENSMUST00000034388 Ms4a2P20490 235 aa21.17■□□□□ 0.98
Vps4a-201ENSMUST00000034388 Taok2Q6ZQ29 1240 aa21.17■□□□□ 0.98
Vps4a-201ENSMUST00000034388 Rnf214Q8BFU3 668 aaKnown RBP21.17■□□□□ 0.98
Vps4a-201ENSMUST00000034388 Ccar2Q8VDP4 922 aaKnown RBP21.17■□□□□ 0.98
Vps4a-201ENSMUST00000034388 Brpf1B2RRD7 1212 aa21.17■□□□□ 0.98
Vps4a-201ENSMUST00000034388 Fam83gQ5SWY7 812 aa21.17■□□□□ 0.98
Vps4a-201ENSMUST00000034388 Pdzrn3Q69ZS0 1063 aa21.17■□□□□ 0.98
Vps4a-201ENSMUST00000034388 Q3TQI7 289 aaKnown RBP21.16■□□□□ 0.98
Vps4a-201ENSMUST00000034388 Ccne1Q61457 408 aa21.16■□□□□ 0.98
Vps4a-201ENSMUST00000034388 Cc2d1aQ8K1A6 943 aa21.16■□□□□ 0.98
Vps4a-201ENSMUST00000034388 Pmfbp1Q9WVQ0 1022 aa21.16■□□□□ 0.98
Vps4a-201ENSMUST00000034388 Chd1lQ9CXF7 900 aa21.15■□□□□ 0.98
Vps4a-201ENSMUST00000034388 Ltbp4Q8K4G1 1666 aa21.15■□□□□ 0.98
Vps4a-201ENSMUST00000034388 Atf5O70191 283 aa21.14■□□□□ 0.98
Vps4a-201ENSMUST00000034388 CalcaP70160 136 aa21.14■□□□□ 0.98
Vps4a-201ENSMUST00000034388 Wdr93Q402B2 695 aa21.14■□□□□ 0.98
Vps4a-201ENSMUST00000034388 Casc1Q6TDU8 730 aa21.14■□□□□ 0.98
Vps4a-201ENSMUST00000034388 Rapgef3Q8VCC8 918 aa21.14■□□□□ 0.98
Vps4a-201ENSMUST00000034388 Ubr1O70481 1757 aa21.14■□□□□ 0.98
Vps4a-201ENSMUST00000034388 Nrxn3Q6P9K9 1571 aa21.14■□□□□ 0.97
Vps4a-201ENSMUST00000034388 Wdr78E9PYY5 807 aa21.14■□□□□ 0.97
Vps4a-201ENSMUST00000034388 Cwc27Q3TKY6 469 aa21.14■□□□□ 0.97
Vps4a-201ENSMUST00000034388 Rps6ka5Q8C050 863 aa21.14■□□□□ 0.97
Vps4a-201ENSMUST00000034388 NgefQ8CHT1 710 aa21.14■□□□□ 0.97
Vps4a-201ENSMUST00000034388 Lekr1B2RVN1 116 aa21.13■□□□□ 0.97
Vps4a-201ENSMUST00000034388 Jakmip1Q8BVL9 626 aa21.13■□□□□ 0.97
Vps4a-201ENSMUST00000034388 Myo5bP21271 1818 aa21.13■□□□□ 0.97
Vps4a-201ENSMUST00000034388 Elmsan1E9Q2I4 1089 aaKnown RBP21.13■□□□□ 0.97
Vps4a-201ENSMUST00000034388 Kif3aP28741 701 aa21.13■□□□□ 0.97
Vps4a-201ENSMUST00000034388 Med4Q9CQA5 270 aa21.13■□□□□ 0.97
Vps4a-201ENSMUST00000034388 Rad50P70388 1312 aa21.13■□□□□ 0.97
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms