RNA–Protein interactions for RNA: ENSMUST00000029549.15

Tpm3-201, Transcript of Tropomyosin alpha-3 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm3, Length 2,230 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3-201ENSMUST00000029549 Nol11Q8BJW5 723 aaKnown RBP18.1■□□□□ 0.49
Tpm3-201ENSMUST00000029549 Gcc1Q9D4H2 778 aa18.1■□□□□ 0.49
Tpm3-201ENSMUST00000029549 Sptbn5F6UCX4 1208 aa18.08■□□□□ 0.49
Tpm3-201ENSMUST00000029549 Ddx54Q8K4L0 874 aaKnown RBP18.08■□□□□ 0.49
Tpm3-201ENSMUST00000029549 Atp10bB1AWN4 1474 aa18.08■□□□□ 0.49
Tpm3-201ENSMUST00000029549 Pnpla7A2AJ88 1352 aa18.08■□□□□ 0.49
Tpm3-201ENSMUST00000029549 Aox2Q5SGK3 1345 aa18.08■□□□□ 0.48
Tpm3-201ENSMUST00000029549 Sema6bO54951 886 aa18.08■□□□□ 0.48
Tpm3-201ENSMUST00000029549 Cnksr1A2A9K7 700 aa18.07■□□□□ 0.48
Tpm3-201ENSMUST00000029549 Eif4a1P60843 406 aaKnown RBP18.07■□□□□ 0.48
Tpm3-201ENSMUST00000029549 Cypt2Q6P924 180 aa18.07■□□□□ 0.48
Tpm3-201ENSMUST00000029549 Mcm2P97310 904 aa18.07■□□□□ 0.48
Tpm3-201ENSMUST00000029549 TkfcQ8VC30 578 aa18.07■□□□□ 0.48
Tpm3-201ENSMUST00000029549 FanclQ9CR14 375 aa18.07■□□□□ 0.48
Tpm3-201ENSMUST00000029549 Simc1E9Q6E9 1354 aa18.07■□□□□ 0.48
Tpm3-201ENSMUST00000029549 Col15a1O35206 1367 aa18.07■□□□□ 0.48
Tpm3-201ENSMUST00000029549 Dlg5E9Q9R9 1921 aa18.06■□□□□ 0.48
Tpm3-201ENSMUST00000029549 Tnpo1Q8BFY9 898 aaKnown RBP18.06■□□□□ 0.48
Tpm3-201ENSMUST00000029549 Tnnt1O88346 262 aa18.05■□□□□ 0.48
Tpm3-201ENSMUST00000029549 Ggt6Q6PDE7 497 aa18.05■□□□□ 0.48
Tpm3-201ENSMUST00000029549 Nhsl1Q8CAF4 1587 aa18.05■□□□□ 0.48
Tpm3-201ENSMUST00000029549 Disp3A3KFU9 1347 aa18.05■□□□□ 0.48
Tpm3-201ENSMUST00000029549 Gnai2P08752 355 aaKnown RBP18.04■□□□□ 0.48
Tpm3-201ENSMUST00000029549 Btbd11Q6GQW0 1109 aa18.04■□□□□ 0.48
Tpm3-201ENSMUST00000029549 Gm21698A0A087WQP8 267 aa18.04■□□□□ 0.48
Tpm3-201ENSMUST00000029549 Gm21671G3UY31 267 aa18.04■□□□□ 0.48
Tpm3-201ENSMUST00000029549 Cadps2Q8BYR5 1297 aa18.04■□□□□ 0.48
Tpm3-201ENSMUST00000029549 Gm10471E9Q1C7 252 aa18.03■□□□□ 0.48
Tpm3-201ENSMUST00000029549 Ccdc146E9Q9F7 977 aa18.03■□□□□ 0.48
Tpm3-201ENSMUST00000029549 CoilQ5SU73 570 aa18.03■□□□□ 0.48
Tpm3-201ENSMUST00000029549 Lrp6O88572 1613 aa18.03■□□□□ 0.48
Tpm3-201ENSMUST00000029549 OptnQ8K3K8 584 aa18.03■□□□□ 0.48
Tpm3-201ENSMUST00000029549 Card10P58660 1021 aa18.02■□□□□ 0.48
Tpm3-201ENSMUST00000029549 Nkx2-3P97334 362 aa18.02■□□□□ 0.48
Tpm3-201ENSMUST00000029549 Kif2cQ922S8 721 aa18.02■□□□□ 0.48
Tpm3-201ENSMUST00000029549 Col1a2Q01149 1372 aa18.02■□□□□ 0.48
Tpm3-201ENSMUST00000029549 Cdhr2E9Q7P9 1308 aa18.01■□□□□ 0.47
Tpm3-201ENSMUST00000029549 Stk36Q69ZM6 1316 aa18.01■□□□□ 0.47
Tpm3-201ENSMUST00000029549 Cntnap1O54991 1385 aa18.01■□□□□ 0.47
Tpm3-201ENSMUST00000029549 CrklP47941 303 aa18.01■□□□□ 0.47
Tpm3-201ENSMUST00000029549 Tbc1d9Q3UYK3 1264 aa18.01■□□□□ 0.47
Tpm3-201ENSMUST00000029549 MypopQ8R4U1 393 aa18.01■□□□□ 0.47
Tpm3-201ENSMUST00000029549 Nek4Q9Z1J2 792 aa18.01■□□□□ 0.47
Tpm3-201ENSMUST00000029549 ScaperF8VQ70 1398 aaKnown RBP18.01■□□□□ 0.47
Tpm3-201ENSMUST00000029549 Bcl9lQ67FY2 1494 aa18.01■□□□□ 0.47
Tpm3-201ENSMUST00000029549 Eno4Q8C042 619 aa18■□□□□ 0.47
Tpm3-201ENSMUST00000029549 Irx6Q9ER75 438 aa18■□□□□ 0.47
Tpm3-201ENSMUST00000029549 ArxO35085 564 aa18■□□□□ 0.47
Tpm3-201ENSMUST00000029549 Cyp2d11P24457 504 aa18■□□□□ 0.47
Tpm3-201ENSMUST00000029549 Arhgef1Q61210 920 aaKnown RBP18■□□□□ 0.47
Tpm3-201ENSMUST00000029549 ThemisQ8BGW0 636 aa18■□□□□ 0.47
Tpm3-201ENSMUST00000029549 Smarca5Q91ZW3 1051 aaKnown RBP18■□□□□ 0.47
Tpm3-201ENSMUST00000029549 CenppQ9CZ92 286 aa18■□□□□ 0.47
Tpm3-201ENSMUST00000029549 Atg4a-psA0A0G2JFS9 396 aa17.99■□□□□ 0.47
Tpm3-201ENSMUST00000029549 Atp8b2P98199 1209 aa17.99■□□□□ 0.47
Tpm3-201ENSMUST00000029549 Atg4aQ8C9S8 396 aa17.99■□□□□ 0.47
Tpm3-201ENSMUST00000029549 Cc2d1aQ8K1A6 943 aa17.98■□□□□ 0.47
Tpm3-201ENSMUST00000029549 BcorQ8CGN4 1759 aa17.98■□□□□ 0.47
Tpm3-201ENSMUST00000029549 Srgap3Q812A2 1099 aa17.98■□□□□ 0.47
Tpm3-201ENSMUST00000029549 Ppp1r42Q8R1Z4 357 aa17.98■□□□□ 0.47
Tpm3-201ENSMUST00000029549 Pdzd9Q9D9M4 266 aa17.98■□□□□ 0.47
Tpm3-201ENSMUST00000029549 Echdc1Q9D9V3 322 aa17.98■□□□□ 0.47
Tpm3-201ENSMUST00000029549 Anapc15-psA0A140T8L6 141 aa17.97■□□□□ 0.47
Tpm3-201ENSMUST00000029549 PsapQ61207 557 aaKnown RBP17.97■□□□□ 0.47
Tpm3-201ENSMUST00000029549 Nphp1Q9QY53 687 aa17.97■□□□□ 0.47
Tpm3-201ENSMUST00000029549 Fkbp4P30416 458 aa17.96■□□□□ 0.47
Tpm3-201ENSMUST00000029549 Atg3Q9CPX6 314 aa17.96■□□□□ 0.47
Tpm3-201ENSMUST00000029549 Gm10093D3YYI8 482 aa17.96■□□□□ 0.47
Tpm3-201ENSMUST00000029549 Hdac1O09106 482 aaKnown RBP17.96■□□□□ 0.47
Tpm3-201ENSMUST00000029549 Cyp46a1Q9WVK8 500 aa17.96■□□□□ 0.47
Tpm3-201ENSMUST00000029549 Tmem119Q8R138 280 aa17.95■□□□□ 0.46
Tpm3-201ENSMUST00000029549 Mmp8O70138 465 aa17.95■□□□□ 0.46
Tpm3-201ENSMUST00000029549 Hsp90aa1P07901 733 aaKnown RBP17.95■□□□□ 0.46
Tpm3-201ENSMUST00000029549 GckrQ91X44 587 aa17.95■□□□□ 0.46
Tpm3-201ENSMUST00000029549 Zranb3Q6NZP1 1069 aa17.94■□□□□ 0.46
Tpm3-201ENSMUST00000029549 Psrc1Q9D0P7 329 aa17.94■□□□□ 0.46
Tpm3-201ENSMUST00000029549 Phkg2Q9DB30 406 aa17.94■□□□□ 0.46
Tpm3-201ENSMUST00000029549 Cwc27Q3TKY6 469 aa17.93■□□□□ 0.46
Tpm3-201ENSMUST00000029549 Ccdc155Q80VJ8 648 aa17.93■□□□□ 0.46
Tpm3-201ENSMUST00000029549 Bend3Q6PAL0 825 aa17.92■□□□□ 0.46
Tpm3-201ENSMUST00000029549 Chmp7Q8R1T1 451 aa17.92■□□□□ 0.46
Tpm3-201ENSMUST00000029549 Lrrc59Q922Q8 307 aaKnown RBP17.92■□□□□ 0.46
Tpm3-201ENSMUST00000029549 Taf7Q9R1C0 341 aa17.92■□□□□ 0.46
Tpm3-201ENSMUST00000029549 Tns2Q8CGB6 1400 aa17.91■□□□□ 0.46
Tpm3-201ENSMUST00000029549 Slit1Q80TR4 1531 aa17.91■□□□□ 0.46
Tpm3-201ENSMUST00000029549 Tnks1bp1P58871 1720 aa17.91■□□□□ 0.46
Tpm3-201ENSMUST00000029549 FocadA2AKG8 1798 aa17.91■□□□□ 0.46
Tpm3-201ENSMUST00000029549 Mcmdc2E9Q956 681 aa17.91■□□□□ 0.46
Tpm3-201ENSMUST00000029549 Pdia3P27773 505 aaKnown RBP17.9■□□□□ 0.46
Tpm3-201ENSMUST00000029549 Ppp6r3Q922D4 844 aa17.9■□□□□ 0.46
Tpm3-201ENSMUST00000029549 Adcy9P51830 1353 aa17.9■□□□□ 0.46
Tpm3-201ENSMUST00000029549 Hoxa7P02830 229 aa17.9■□□□□ 0.46
Tpm3-201ENSMUST00000029549 Zap70P43404 618 aa17.9■□□□□ 0.46
Tpm3-201ENSMUST00000029549 RgmbQ7TQ33 436 aa17.9■□□□□ 0.46
Tpm3-201ENSMUST00000029549 Htatsf1Q8BGC0 757 aa17.9■□□□□ 0.46
Tpm3-201ENSMUST00000029549 Tfip11Q9ERA6 838 aaKnown RBP17.9■□□□□ 0.46
Tpm3-201ENSMUST00000029549 Exoc6bA6H5Z3 810 aa17.89■□□□□ 0.45
Tpm3-201ENSMUST00000029549 Bcl2l13P59017 434 aa17.89■□□□□ 0.45
Tpm3-201ENSMUST00000029549 Nucb1Q02819 459 aaKnown RBP17.89■□□□□ 0.45
Tpm3-201ENSMUST00000029549 GorabQ8BRM2 368 aa17.89■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 35 ms