RNA–Protein interactions for RNA: ENSMUST00000027068.10

Tram1-201, Transcript of Translocating chain-associated membrane protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tram1, Length 2,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1-201ENSMUST00000027068 ScaperF8VQ70 1398 aaKnown RBP23.46■■□□□ 1.35
Tram1-201ENSMUST00000027068 Kdm4aQ8BW72 1064 aa23.45■■□□□ 1.34
Tram1-201ENSMUST00000027068 Rtf1A2AQ19 715 aaKnown RBP23.45■■□□□ 1.34
Tram1-201ENSMUST00000027068 Tnnt1O88346 262 aa23.45■■□□□ 1.34
Tram1-201ENSMUST00000027068 Cwc27Q3TKY6 469 aa23.45■■□□□ 1.34
Tram1-201ENSMUST00000027068 LlphQ9D945 130 aaKnown RBP23.44■■□□□ 1.34
Tram1-201ENSMUST00000027068 Naa30Q8CES0 364 aa23.44■■□□□ 1.34
Tram1-201ENSMUST00000027068 Ap3b2Q9JME5 1082 aa23.44■■□□□ 1.34
Tram1-201ENSMUST00000027068 Chd4Q6PDQ2 1915 aaKnown RBP23.44■■□□□ 1.34
Tram1-201ENSMUST00000027068 Q3TQI7 289 aaKnown RBP23.43■■□□□ 1.34
Tram1-201ENSMUST00000027068 St18Q80TY4 1045 aa23.43■■□□□ 1.34
Tram1-201ENSMUST00000027068 Olfml1Q8BSH2 233 aa23.43■■□□□ 1.34
Tram1-201ENSMUST00000027068 Nwd1A6H603 1563 aa23.43■■□□□ 1.34
Tram1-201ENSMUST00000027068 MccE9PWI3 1003 aa23.42■■□□□ 1.34
Tram1-201ENSMUST00000027068 Ccne1Q61457 408 aa23.41■■□□□ 1.34
Tram1-201ENSMUST00000027068 Larp1bA0A0A6YXJ7 370 aaKnown RBP23.41■■□□□ 1.34
Tram1-201ENSMUST00000027068 Mindy4Q3UQI9 744 aa23.41■■□□□ 1.34
Tram1-201ENSMUST00000027068 AnlnQ8K298 1121 aaKnown RBP23.41■■□□□ 1.34
Tram1-201ENSMUST00000027068 Ythdc1E9Q5K9 736 aaKnown RBP23.4■■□□□ 1.34
Tram1-201ENSMUST00000027068 Tpx2A2APB8 745 aaKnown RBP23.4■■□□□ 1.34
Tram1-201ENSMUST00000027068 Fbxo2Q80UW2 297 aa23.4■■□□□ 1.34
Tram1-201ENSMUST00000027068 HnrnpmQ9D0E1 729 aaKnown RBP23.4■■□□□ 1.34
Tram1-201ENSMUST00000027068 Mmp8O70138 465 aa23.39■■□□□ 1.34
Tram1-201ENSMUST00000027068 Gm156Q58A37 223 aa23.39■■□□□ 1.34
Tram1-201ENSMUST00000027068 Slx4ipQ9D7Y9 413 aa23.39■■□□□ 1.34
Tram1-201ENSMUST00000027068 IghaA0A0A6YXW6 389 aa23.39■■□□□ 1.33
Tram1-201ENSMUST00000027068 PplQ9R269 1755 aa23.39■■□□□ 1.33
Tram1-201ENSMUST00000027068 Hoxb7P09024 217 aa23.39■■□□□ 1.33
Tram1-201ENSMUST00000027068 Gys2Q8VCB3 704 aa23.39■■□□□ 1.33
Tram1-201ENSMUST00000027068 Pmfbp1Q9WVQ0 1022 aa23.39■■□□□ 1.33
Tram1-201ENSMUST00000027068 Pcmtd1P59913 357 aa23.38■■□□□ 1.33
Tram1-201ENSMUST00000027068 Pdzrn3Q69ZS0 1063 aa23.38■■□□□ 1.33
Tram1-201ENSMUST00000027068 Ercc6l2Q9JIM3 1537 aa23.37■■□□□ 1.33
Tram1-201ENSMUST00000027068 Lmod3E9QA62 571 aa23.37■■□□□ 1.33
Tram1-201ENSMUST00000027068 Stk3Q9JI10 497 aa23.37■■□□□ 1.33
Tram1-201ENSMUST00000027068 Babam1Q3UI43 333 aa23.36■■□□□ 1.33
Tram1-201ENSMUST00000027068 Dnajc14Q921R4 703 aa23.36■■□□□ 1.33
Tram1-201ENSMUST00000027068 PtpruB1AUH1 1446 aa23.36■■□□□ 1.33
Tram1-201ENSMUST00000027068 Atp8b2P98199 1209 aa23.36■■□□□ 1.33
Tram1-201ENSMUST00000027068 Sox12Q04890 314 aa23.36■■□□□ 1.33
Tram1-201ENSMUST00000027068 Plcd3Q8K2J0 785 aa23.36■■□□□ 1.33
Tram1-201ENSMUST00000027068 Atp6v1dP57746 247 aa23.36■■□□□ 1.33
Tram1-201ENSMUST00000027068 Nol8Q3UHX0 1147 aaKnown RBP23.36■■□□□ 1.33
Tram1-201ENSMUST00000027068 Mlh1Q9JK91 760 aa23.36■■□□□ 1.33
Tram1-201ENSMUST00000027068 Itsn1Q9Z0R4 1714 aa23.36■■□□□ 1.33
Tram1-201ENSMUST00000027068 Elmsan1E9Q2I4 1089 aaKnown RBP23.34■■□□□ 1.33
Tram1-201ENSMUST00000027068 EappQ5BU09 281 aa23.34■■□□□ 1.33
Tram1-201ENSMUST00000027068 Glipr1l2Q9CQ35 332 aa23.34■■□□□ 1.33
Tram1-201ENSMUST00000027068 Kif1aP33173 1695 aa23.34■■□□□ 1.33
Tram1-201ENSMUST00000027068 Tshz2Q68FE9 1030 aa23.34■■□□□ 1.33
Tram1-201ENSMUST00000027068 Pof1bQ8K4L4 587 aa23.34■■□□□ 1.33
Tram1-201ENSMUST00000027068 Pabpn1Q8CCS6 302 aaKnown RBP23.33■■□□□ 1.33
Tram1-201ENSMUST00000027068 Rnf123Q5XPI3 1314 aa23.33■■□□□ 1.33
Tram1-201ENSMUST00000027068 Casc1Q6TDU8 730 aa23.32■■□□□ 1.32
Tram1-201ENSMUST00000027068 KinQ8K339 391 aa23.32■■□□□ 1.32
Tram1-201ENSMUST00000027068 Adgrb1Q3UHD1 1582 aa23.32■■□□□ 1.32
Tram1-201ENSMUST00000027068 Bms1Q6PGF5 1284 aaKnown RBP23.32■■□□□ 1.32
Tram1-201ENSMUST00000027068 Samm50Q8BGH2 469 aa23.32■■□□□ 1.32
Tram1-201ENSMUST00000027068 F2rP30558 430 aa23.32■■□□□ 1.32
Tram1-201ENSMUST00000027068 Anp32cQ64G17 123 aa23.32■■□□□ 1.32
Tram1-201ENSMUST00000027068 Unc5clQ6R653 518 aa23.32■■□□□ 1.32
Tram1-201ENSMUST00000027068 Eya1P97767 591 aa23.31■■□□□ 1.32
Tram1-201ENSMUST00000027068 Mcmdc2E9Q956 681 aa23.31■■□□□ 1.32
Tram1-201ENSMUST00000027068 Bach1P97302 739 aa23.31■■□□□ 1.32
Tram1-201ENSMUST00000027068 Utp18Q5SSI6 552 aaKnown RBP23.31■■□□□ 1.32
Tram1-201ENSMUST00000027068 Cabp4Q8VHC5 271 aa23.3■■□□□ 1.32
Tram1-201ENSMUST00000027068 Gemin5Q8BX17 1502 aaKnown RBP23.3■■□□□ 1.32
Tram1-201ENSMUST00000027068 Nckap5lQ6GQX2 1323 aa23.3■■□□□ 1.32
Tram1-201ENSMUST00000027068 Anapc15P60007 132 aa23.3■■□□□ 1.32
Tram1-201ENSMUST00000027068 Zbtb22Q9Z0G7 638 aa23.3■■□□□ 1.32
Tram1-201ENSMUST00000027068 Bach2P97303 839 aa23.29■■□□□ 1.32
Tram1-201ENSMUST00000027068 Ccar2Q8VDP4 922 aaKnown RBP23.29■■□□□ 1.32
Tram1-201ENSMUST00000027068 PzpQ61838 1495 aa23.29■■□□□ 1.32
Tram1-201ENSMUST00000027068 Smarce1O54941 411 aaKnown RBP23.29■■□□□ 1.32
Tram1-201ENSMUST00000027068 Cers3Q1A3B0 383 aa23.29■■□□□ 1.32
Tram1-201ENSMUST00000027068 Slc4a10Q5DTL9 1118 aa23.29■■□□□ 1.32
Tram1-201ENSMUST00000027068 Mcm3P25206 812 aaKnown RBP23.28■■□□□ 1.32
Tram1-201ENSMUST00000027068 Chpf2Q3UU43 768 aa23.28■■□□□ 1.32
Tram1-201ENSMUST00000027068 Cyp2d12Q8BVD2 504 aa23.28■■□□□ 1.32
Tram1-201ENSMUST00000027068 Parp14Q2EMV9 1817 aa23.28■■□□□ 1.32
Tram1-201ENSMUST00000027068 NcapgE9PWG6 1004 aa23.27■■□□□ 1.32
Tram1-201ENSMUST00000027068 Adcy5P84309 1262 aa23.27■■□□□ 1.32
Tram1-201ENSMUST00000027068 Ms4a2P20490 235 aa23.27■■□□□ 1.32
Tram1-201ENSMUST00000027068 Gjb2Q00977 226 aa23.27■■□□□ 1.32
Tram1-201ENSMUST00000027068 DpydQ8CHR6 1025 aa23.26■■□□□ 1.31
Tram1-201ENSMUST00000027068 Ints3Q7TPD0 1041 aaKnown RBP23.26■■□□□ 1.31
Tram1-201ENSMUST00000027068 Serpina10Q8R121 448 aa23.26■■□□□ 1.31
Tram1-201ENSMUST00000027068 Disp3A3KFU9 1347 aa23.25■■□□□ 1.31
Tram1-201ENSMUST00000027068 Zfp804bA0A0G2JGH6 1343 aa23.25■■□□□ 1.31
Tram1-201ENSMUST00000027068 Ppp1r18Q8BQ30 594 aa23.25■■□□□ 1.31
Tram1-201ENSMUST00000027068 Rufy3Q9D394 469 aa23.25■■□□□ 1.31
Tram1-201ENSMUST00000027068 Ccdc7Q9D541 371 aa23.25■■□□□ 1.31
Tram1-201ENSMUST00000027068 Utp3Q9JI13 469 aaKnown RBP23.25■■□□□ 1.31
Tram1-201ENSMUST00000027068 Foxp4Q9DBY0 795 aaKnown RBP23.24■■□□□ 1.31
Tram1-201ENSMUST00000027068 Gm21190A0A0G2JGJ6 266 aa23.24■■□□□ 1.31
Tram1-201ENSMUST00000027068 Cyp2d11P24457 504 aa23.24■■□□□ 1.31
Tram1-201ENSMUST00000027068 Strn4P58404 760 aa23.23■■□□□ 1.31
Tram1-201ENSMUST00000027068 Msh6P54276 1358 aaKnown RBP23.23■■□□□ 1.31
Tram1-201ENSMUST00000027068 Astn2Q80Z10 1352 aa23.23■■□□□ 1.31
Tram1-201ENSMUST00000027068 Tlr7P58681 1050 aa23.23■■□□□ 1.31
Retrieved 100 of 22,080 RNA–protein pairs in 11.1 ms