Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 RNU6-1090P-201ENST00000364065 94 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 Y_RNA.301-201ENST00000364990 103 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.65□□□□□ -2.67
PRKDCP78527 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.65□□□□□ -2.67
PRKDCP78527 U8.20-201ENST00000459445 131 ntBASIC-1.65□□□□□ -2.67
PRKDCP78527 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.65□□□□□ -2.67
PRKDCP78527 RNU6-307P-201ENST00000516743 106 ntBASIC-1.65□□□□□ -2.67
PRKDCP78527 DEFB117-201ENST00000602356 141 ntBASIC-1.65□□□□□ -2.67
PRKDCP78527 MIR6128-201ENST00000615528 109 ntBASIC-1.65□□□□□ -2.67
PRKDCP78527 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.65□□□□□ -2.67
PRKDCP78527 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.65□□□□□ -2.67
PRKDCP78527 RNY3P3-201ENST00000363816 102 ntBASIC-1.65□□□□□ -2.67
PRKDCP78527 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.65□□□□□ -2.67
PRKDCP78527 MT-TT-201ENST00000387460 66 ntBASIC-1.65□□□□□ -2.67
PRKDCP78527 MIR526A2-201ENST00000390198 65 ntBASIC-1.65□□□□□ -2.67
PRKDCP78527 MIR548U-201ENST00000390728 81 ntBASIC-1.65□□□□□ -2.67
PRKDCP78527 RNU6-101P-201ENST00000410323 104 ntBASIC-1.65□□□□□ -2.67
PRKDCP78527 MIR1270-201ENST00000459320 83 ntBASIC-1.65□□□□□ -2.67
PRKDCP78527 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.65□□□□□ -2.67
PRKDCP78527 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.66□□□□□ -2.67
PRKDCP78527 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.66□□□□□ -2.67
PRKDCP78527 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.66□□□□□ -2.67
PRKDCP78527 RNU6-751P-201ENST00000516382 101 ntBASIC-1.66□□□□□ -2.67
PRKDCP78527 HSPE1P25-201ENST00000455484 251 ntBASIC-1.66□□□□□ -2.68
PRKDCP78527 RNU7-88P-201ENST00000458752 63 ntBASIC-1.66□□□□□ -2.68
PRKDCP78527 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.66□□□□□ -2.68
PRKDCP78527 Y_RNA.169-201ENST00000363745 96 ntBASIC-1.66□□□□□ -2.68
PRKDCP78527 RNU6-1013P-201ENST00000384180 107 ntBASIC-1.66□□□□□ -2.68
PRKDCP78527 RNU6-648P-201ENST00000410190 107 ntBASIC-1.66□□□□□ -2.68
PRKDCP78527 Y_RNA.682-201ENST00000516457 100 ntBASIC-1.66□□□□□ -2.68
PRKDCP78527 MIR6739-201ENST00000622461 75 ntBASIC-1.66□□□□□ -2.68
PRKDCP78527 Y_RNA.381-201ENST00000365666 102 ntBASIC-1.67□□□□□ -2.68
PRKDCP78527 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.67□□□□□ -2.68
PRKDCP78527 RNU5A-2P-201ENST00000384337 116 ntBASIC-1.67□□□□□ -2.68
PRKDCP78527 Y_RNA.474-201ENST00000384341 102 ntBASIC-1.67□□□□□ -2.68
PRKDCP78527 AL691482.2-201ENST00000457453 84 ntBASIC-1.67□□□□□ -2.68
PRKDCP78527 Y_RNA.772-201ENST00000606692 102 ntBASIC-1.67□□□□□ -2.68
PRKDCP78527 AC073114.1-201ENST00000612027 490 ntBASIC-1.67□□□□□ -2.68
PRKDCP78527 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.67□□□□□ -2.68
PRKDCP78527 MIR4773-1-201ENST00000637203 78 ntBASIC-1.67□□□□□ -2.68
PRKDCP78527 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-1.67□□□□□ -2.68
PRKDCP78527 Y_RNA.201-201ENST00000364052 96 ntBASIC-1.67□□□□□ -2.68
PRKDCP78527 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.67□□□□□ -2.68
PRKDCP78527 MTATP6P21-201ENST00000440681 189 ntBASIC-1.67□□□□□ -2.68
PRKDCP78527 RNU6-1059P-201ENST00000363752 98 ntBASIC-1.68□□□□□ -2.68
PRKDCP78527 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.68□□□□□ -2.68
PRKDCP78527 Y_RNA.296-201ENST00000364930 108 ntBASIC-1.68□□□□□ -2.68
PRKDCP78527 RNU6-306P-201ENST00000384617 107 ntBASIC-1.68□□□□□ -2.68
PRKDCP78527 RNU6-566P-201ENST00000516790 107 ntBASIC-1.68□□□□□ -2.68
PRKDCP78527 RNU6-1088P-201ENST00000516850 104 ntBASIC-1.68□□□□□ -2.68
PRKDCP78527 SNORA33.1-201ENST00000364957 130 ntBASIC-1.68□□□□□ -2.68
PRKDCP78527 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.68□□□□□ -2.68
PRKDCP78527 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.68□□□□□ -2.68
PRKDCP78527 MRPS35P2-201ENST00000508242 191 ntBASIC-1.68□□□□□ -2.68
PRKDCP78527 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.68□□□□□ -2.68
PRKDCP78527 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.68□□□□□ -2.68
PRKDCP78527 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.68□□□□□ -2.68
PRKDCP78527 RNU2-72P-201ENST00000411175 163 ntBASIC-1.68□□□□□ -2.68
PRKDCP78527 AC138393.2-201ENST00000414742 246 ntBASIC-1.68□□□□□ -2.68
PRKDCP78527 RNU6-563P-201ENST00000364872 108 ntBASIC-1.69□□□□□ -2.68
PRKDCP78527 Y_RNA.414-201ENST00000384011 101 ntBASIC-1.69□□□□□ -2.68
PRKDCP78527 AP002392.1-201ENST00000537692 208 ntBASIC-1.69□□□□□ -2.68
PRKDCP78527 AF246928.1-201ENST00000623768 87 ntBASIC-1.69□□□□□ -2.68
PRKDCP78527 FGF7P7-201ENST00000514120 227 ntBASIC-1.69□□□□□ -2.68
PRKDCP78527 RNU6-861P-201ENST00000516745 106 ntBASIC-1.69□□□□□ -2.68
PRKDCP78527 Y_RNA.713-201ENST00000517013 96 ntBASIC-1.69□□□□□ -2.68
PRKDCP78527 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.69□□□□□ -2.68
PRKDCP78527 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.69□□□□□ -2.68
PRKDCP78527 MIR379-201ENST00000362218 67 ntBASIC-1.69□□□□□ -2.68
PRKDCP78527 MIR548A3-201ENST00000385297 97 ntBASIC-1.69□□□□□ -2.68
PRKDCP78527 MTND2P14-201ENST00000482139 351 ntBASIC-1.69□□□□□ -2.68
PRKDCP78527 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.7□□□□□ -2.68
PRKDCP78527 AC040904.1-201ENST00000590850 223 ntBASIC-1.7□□□□□ -2.68
PRKDCP78527 AL606534.2-204ENST00000635008 178 ntBASIC-1.7□□□□□ -2.68
PRKDCP78527 AC021753.1-201ENST00000635724 168 ntBASIC-1.7□□□□□ -2.68
PRKDCP78527 AC068137.3-201ENST00000639191 341 ntBASIC-1.7□□□□□ -2.68
PRKDCP78527 RNU6-458P-201ENST00000384179 107 ntBASIC-1.7□□□□□ -2.68
PRKDCP78527 SNORA19.1-201ENST00000410656 129 ntBASIC-1.7□□□□□ -2.68
PRKDCP78527 U6.58-201ENST00000613107 107 ntBASIC-1.7□□□□□ -2.68
PRKDCP78527 AL138825.1-201ENST00000618587 192 ntBASIC-1.7□□□□□ -2.68
PRKDCP78527 RNU6-818P-201ENST00000364837 108 ntBASIC-1.7□□□□□ -2.68
PRKDCP78527 RNU6-995P-201ENST00000391244 107 ntBASIC-1.7□□□□□ -2.68
PRKDCP78527 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.7□□□□□ -2.68
PRKDCP78527 UBE2WP1-201ENST00000362030 340 ntBASIC-1.71□□□□□ -2.68
PRKDCP78527 VN1R91P-201ENST00000594377 169 ntBASIC-1.71□□□□□ -2.68
PRKDCP78527 AC084782.3-201ENST00000612282 578 ntBASIC-1.71□□□□□ -2.68
PRKDCP78527 SNORD81.1-201ENST00000363064 77 ntBASIC-1.71□□□□□ -2.68
PRKDCP78527 RNU6-774P-201ENST00000363238 107 ntBASIC-1.71□□□□□ -2.68
PRKDCP78527 Y_RNA.176-201ENST00000363815 109 ntBASIC-1.71□□□□□ -2.68
PRKDCP78527 SNORA75-201ENST00000384158 137 ntBASIC-1.71□□□□□ -2.68
PRKDCP78527 MIR548I1-201ENST00000408810 149 ntBASIC-1.71□□□□□ -2.68
PRKDCP78527 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.72□□□□□ -2.68
PRKDCP78527 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.72□□□□□ -2.68
PRKDCP78527 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.72□□□□□ -2.68
PRKDCP78527 AL359880.1-201ENST00000621879 266 ntBASIC-1.72□□□□□ -2.68
PRKDCP78527 RNU6-832P-201ENST00000363319 107 ntBASIC-1.72□□□□□ -2.68
PRKDCP78527 RNU6-1085P-201ENST00000363576 107 ntBASIC-1.72□□□□□ -2.68
PRKDCP78527 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.72□□□□□ -2.68
PRKDCP78527 RNU6-662P-201ENST00000384253 104 ntBASIC-1.72□□□□□ -2.68
PRKDCP78527 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-1.72□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 287.7 ms