RNA–Protein interactions for RNA: ENST00000364872.1

RNU6-563P-201, Transcript of RNA, U6 small nuclear 563, pseudogene, humanhuman

BASIC

Gene RNU6-563P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-563P-201ENST00000364872 POTEDQ86YR6 584 aa3.44□□□□□ -1.86
RNU6-563P-201ENST00000364872 POTEHQ6S545 545 aa2.58□□□□□ -2
RNU6-563P-201ENST00000364872 PLSCR2Q9NRY7 297 aa2.52□□□□□ -2.01
RNU6-563P-201ENST00000364872 CACNB1Q02641 598 aaPredicted RBP2.39□□□□□ -2.03
RNU6-563P-201ENST00000364872 MSH5O43196 834 aa2.24□□□□□ -2.05
RNU6-563P-201ENST00000364872 CHIC1Q5VXU3 224 aa2.11□□□□□ -2.07
RNU6-563P-201ENST00000364872 FOXD1Q16676 465 aa2.1□□□□□ -2.07
RNU6-563P-201ENST00000364872 AEBP2Q6ZN18 517 aaPredicted RBP2.08□□□□□ -2.08
RNU6-563P-201ENST00000364872 SENP3Q9H4L4 574 aaPredicted RBP2.07□□□□□ -2.08
RNU6-563P-201ENST00000364872 SP7Q8TDD2 431 aaPredicted RBP2.05□□□□□ -2.08
RNU6-563P-201ENST00000364872 PCDH10Q9P2E7 1040 aa1.94□□□□□ -2.1
RNU6-563P-201ENST00000364872 LHX8Q68G74 356 aa1.91□□□□□ -2.1
RNU6-563P-201ENST00000364872 POTEMA6NI47 508 aa1.85□□□□□ -2.11
RNU6-563P-201ENST00000364872 PHF23Q9BUL5 403 aaPredicted RBP1.85□□□□□ -2.11
RNU6-563P-201ENST00000364872 POTEGQ6S5H5 508 aa1.81□□□□□ -2.12
RNU6-563P-201ENST00000364872 RNF39Q9H2S5 420 aa1.76□□□□□ -2.13
RNU6-563P-201ENST00000364872 C1QBPQ07021 282 aaKnown RBP1.74□□□□□ -2.13
RNU6-563P-201ENST00000364872 PIAS4Q8N2W9 510 aaPredicted RBP1.67□□□□□ -2.14
RNU6-563P-201ENST00000364872 HAX1O00165 279 aa1.66□□□□□ -2.14
RNU6-563P-201ENST00000364872 CHRDL2Q6WN34 429 aa1.66□□□□□ -2.14
RNU6-563P-201ENST00000364872 LOC100996750A0A140TA64 210 aa1.65□□□□□ -2.15
RNU6-563P-201ENST00000364872 KRTAP4-6Q9BYQ5 205 aa1.65□□□□□ -2.15
RNU6-563P-201ENST00000364872 XP32Q5T750 250 aa1.62□□□□□ -2.15
RNU6-563P-201ENST00000364872 MMRN1Q13201 1228 aa1.59□□□□□ -2.15
RNU6-563P-201ENST00000364872 CDAN1Q8IWY9 1227 aa1.59□□□□□ -2.15
RNU6-563P-201ENST00000364872 DCAF8L1A6NGE4 600 aa1.51□□□□□ -2.17
RNU6-563P-201ENST00000364872 SPNS2Q8IVW8 549 aa1.49□□□□□ -2.17
RNU6-563P-201ENST00000364872 OTUD5Q96G74 571 aa1.47□□□□□ -2.17
RNU6-563P-201ENST00000364872 DMRT2Q9Y5R5 561 aa1.46□□□□□ -2.18
RNU6-563P-201ENST00000364872 RBM42Q9BTD8 480 aaKnown RBP1.45□□□□□ -2.18
RNU6-563P-201ENST00000364872 GABBR2O75899 941 aa1.44□□□□□ -2.18
RNU6-563P-201ENST00000364872 FAM163AQ96GL9 167 aaPredicted RBP1.44□□□□□ -2.18
RNU6-563P-201ENST00000364872 KRTAP9-8Q9BYQ0 159 aa1.44□□□□□ -2.18
RNU6-563P-201ENST00000364872 EVX2Q03828 476 aa1.42□□□□□ -2.18
RNU6-563P-201ENST00000364872 KRTAP17-1Q9BYP8 105 aa1.42□□□□□ -2.18
RNU6-563P-201ENST00000364872 BTBD11A6QL63 1104 aa1.41□□□□□ -2.18
RNU6-563P-201ENST00000364872 KRTAP1-3Q8IUG1 177 aa1.4□□□□□ -2.19
RNU6-563P-201ENST00000364872 PIP4P2Q8N4L2 257 aa1.4□□□□□ -2.19
RNU6-563P-201ENST00000364872 KRTAP5-3Q6L8H2 238 aa1.39□□□□□ -2.19
RNU6-563P-201ENST00000364872 LCE2DQ5TA82 110 aaPredicted RBP1.38□□□□□ -2.19
RNU6-563P-201ENST00000364872 DSG3P32926 999 aa1.36□□□□□ -2.19
RNU6-563P-201ENST00000364872 KRTAP4-8Q9BYQ9 185 aa1.36□□□□□ -2.19
RNU6-563P-201ENST00000364872 ANO8Q9HCE9 1232 aaPredicted RBP1.36□□□□□ -2.19
RNU6-563P-201ENST00000364872 SUZ12Q15022 739 aaKnown RBP1.35□□□□□ -2.19
RNU6-563P-201ENST00000364872 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.34□□□□□ -2.19
RNU6-563P-201ENST00000364872 MAMSTRQ6ZN01 415 aa1.34□□□□□ -2.19
RNU6-563P-201ENST00000364872 KRTAP4-8A0A0G2JLE6 195 aa1.33□□□□□ -2.2
RNU6-563P-201ENST00000364872 DCBLD2Q96PD2 775 aa1.33□□□□□ -2.2
RNU6-563P-201ENST00000364872 KRTAP9-6A0A140TA67 174 aa1.32□□□□□ -2.2
RNU6-563P-201ENST00000364872 POTEIP0CG38 1075 aa1.32□□□□□ -2.2
RNU6-563P-201ENST00000364872 KRTAP9-2Q9BYQ4 174 aa1.32□□□□□ -2.2
RNU6-563P-201ENST00000364872 KRTAP4-7Q9BYR0 210 aa1.32□□□□□ -2.2
RNU6-563P-201ENST00000364872 LCE3BQ5TA77 95 aa1.31□□□□□ -2.2
RNU6-563P-201ENST00000364872 PSMG3-AS1Q96PY0 264 aa1.3□□□□□ -2.2
RNU6-563P-201ENST00000364872 IRX2Q9BZI1 471 aaPredicted RBP1.3□□□□□ -2.2
RNU6-563P-201ENST00000364872 CLCN6P51797 869 aa1.28□□□□□ -2.2
RNU6-563P-201ENST00000364872 DNAJC5BQ9UF47 199 aa1.27□□□□□ -2.21
RNU6-563P-201ENST00000364872 C19orf67A6NJJ6 358 aa1.26□□□□□ -2.21
RNU6-563P-201ENST00000364872 FXR2P51116 673 aaKnown RBP eCLIP1.26□□□□□ -2.21
RNU6-563P-201ENST00000364872 SCUBE2Q9NQ36 999 aa1.26□□□□□ -2.21
RNU6-563P-201ENST00000364872 POTEB2H3BUK9 544 aa1.25□□□□□ -2.21
RNU6-563P-201ENST00000364872 CAPN15O75808 1086 aa1.25□□□□□ -2.21
RNU6-563P-201ENST00000364872 RNF166Q96A37 237 aaPredicted RBP1.25□□□□□ -2.21
RNU6-563P-201ENST00000364872 KRTAP4-2Q9BYR5 136 aa1.25□□□□□ -2.21
RNU6-563P-201ENST00000364872 RGS19P49795 217 aa1.24□□□□□ -2.21
RNU6-563P-201ENST00000364872 KRTAP9-9Q9BYP9 154 aa1.24□□□□□ -2.21
RNU6-563P-201ENST00000364872 KRTAP9-4Q9BYQ2 154 aa1.24□□□□□ -2.21
RNU6-563P-201ENST00000364872 MAPK8IP2Q13387 824 aaPredicted RBP1.22□□□□□ -2.21
RNU6-563P-201ENST00000364872 Q6ZNB5 142 aa1.22□□□□□ -2.21
RNU6-563P-201ENST00000364872 KRTAP4-5Q9BYR2 181 aa1.22□□□□□ -2.21
RNU6-563P-201ENST00000364872 STK17AQ9UEE5 414 aa1.21□□□□□ -2.22
RNU6-563P-201ENST00000364872 SCAF1Q9H7N4 1312 aaKnown RBP1.2□□□□□ -2.22
RNU6-563P-201ENST00000364872 LCE1DQ5T752 114 aa1.2□□□□□ -2.22
RNU6-563P-201ENST00000364872 KRTAP4-9Q9BYQ8 210 aa1.19□□□□□ -2.22
RNU6-563P-201ENST00000364872 RGS20O76081 388 aa1.18□□□□□ -2.22
RNU6-563P-201ENST00000364872 AKT1S1Q96B36 256 aa1.18□□□□□ -2.22
RNU6-563P-201ENST00000364872 TMEM121BQ9BXQ6 578 aaPredicted RBP1.18□□□□□ -2.22
RNU6-563P-201ENST00000364872 PLA2G2EQ9NZK7 142 aa1.18□□□□□ -2.22
RNU6-563P-201ENST00000364872 ST18O60284 1047 aa1.17□□□□□ -2.22
RNU6-563P-201ENST00000364872 LAMC2Q13753 1193 aa1.15□□□□□ -2.23
RNU6-563P-201ENST00000364872 MYT1LQ9UL68 1186 aa1.15□□□□□ -2.23
RNU6-563P-201ENST00000364872 ZNF775Q96BV0 537 aaPredicted RBP1.14□□□□□ -2.23
RNU6-563P-201ENST00000364872 REM2Q8IYK8 340 aaPredicted RBP1.13□□□□□ -2.23
RNU6-563P-201ENST00000364872 KRTAP4-12Q9BQ66 201 aa1.13□□□□□ -2.23
RNU6-563P-201ENST00000364872 PITPNM1O00562 1244 aa1.12□□□□□ -2.23
RNU6-563P-201ENST00000364872 LSRQ86X29 649 aaPredicted RBP1.12□□□□□ -2.23
RNU6-563P-201ENST00000364872 PRKAR2AP13861 404 aaKnown RBP1.11□□□□□ -2.23
RNU6-563P-201ENST00000364872 ZNF787Q6DD87 383 aa1.11□□□□□ -2.23
RNU6-563P-201ENST00000364872 GRWD1Q9BQ67 446 aaKnown RBP eCLIP1.11□□□□□ -2.23
RNU6-563P-201ENST00000364872 KRTAP3-3Q9BYR6 98 aa1.11□□□□□ -2.23
RNU6-563P-201ENST00000364872 KRTAP3-2Q9BYR7 98 aa1.11□□□□□ -2.23
RNU6-563P-201ENST00000364872 SPINK5Q9NQ38 1064 aaPredicted RBP1.11□□□□□ -2.23
RNU6-563P-201ENST00000364872 PPP6R1Q9UPN7 881 aa1.11□□□□□ -2.23
RNU6-563P-201ENST00000364872 FAM181BA6NEQ2 426 aa1.1□□□□□ -2.23
RNU6-563P-201ENST00000364872 ADRA2BP18089 450 aa1.1□□□□□ -2.23
RNU6-563P-201ENST00000364872 INSM1Q01101 510 aaPredicted RBP1.1□□□□□ -2.23
RNU6-563P-201ENST00000364872 COBLO75128 1261 aa1.09□□□□□ -2.23
RNU6-563P-201ENST00000364872 POTEJP0CG39 1038 aa1.09□□□□□ -2.23
RNU6-563P-201ENST00000364872 TRAF7Q6Q0C0 670 aa1.09□□□□□ -2.23
RNU6-563P-201ENST00000364872 KRTAP4-11Q9BYQ6 195 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms