Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AC087499.8-201ENST00000578406 226 ntBASIC4.91□□□□□ -1.62
CCDC85AQ96PX6 AL078605.1-201ENST00000603529 500 ntBASIC4.91□□□□□ -1.62
CCDC85AQ96PX6 AC108706.1-201ENST00000611053 297 ntBASIC4.91□□□□□ -1.62
CCDC85AQ96PX6 MIR7702-201ENST00000621931 59 ntBASIC4.91□□□□□ -1.62
CCDC85AQ96PX6 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
CCDC85AQ96PX6 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC85AQ96PX6 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CCDC85AQ96PX6 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC85AQ96PX6 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC85AQ96PX6 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CCDC85AQ96PX6 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC85AQ96PX6 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CCDC85AQ96PX6 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
CCDC85AQ96PX6 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
CCDC85AQ96PX6 RNU1-108P-201ENST00000362556 161 ntBASIC4.9□□□□□ -1.63
CCDC85AQ96PX6 RNA5SP189-201ENST00000364920 115 ntBASIC4.9□□□□□ -1.63
CCDC85AQ96PX6 SNORD50B-201ENST00000364995 70 ntBASIC4.9□□□□□ -1.63
CCDC85AQ96PX6 Z98749.2-208ENST00000381646 500 ntBASIC4.9□□□□□ -1.63
CCDC85AQ96PX6 RNU6-1145P-201ENST00000384246 107 ntBASIC4.9□□□□□ -1.63
CCDC85AQ96PX6 U8.10-201ENST00000384260 133 ntBASIC4.9□□□□□ -1.63
CCDC85AQ96PX6 RNU6-658P-201ENST00000384606 106 ntBASIC4.9□□□□□ -1.63
CCDC85AQ96PX6 MIR329-1-201ENST00000385028 80 ntBASIC4.9□□□□□ -1.63
CCDC85AQ96PX6 AC093578.1-201ENST00000415219 368 ntBASIC4.9□□□□□ -1.63
CCDC85AQ96PX6 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.9□□□□□ -1.63
CCDC85AQ96PX6 AC097462.2-201ENST00000504623 481 ntBASIC4.9□□□□□ -1.63
CCDC85AQ96PX6 SNORA40.9-201ENST00000515895 93 ntBASIC4.9□□□□□ -1.63
CCDC85AQ96PX6 RNU6-346P-201ENST00000516288 111 ntBASIC4.9□□□□□ -1.63
CCDC85AQ96PX6 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC85AQ96PX6 AC025946.2-201ENST00000603398 234 ntBASIC4.9□□□□□ -1.63
CCDC85AQ96PX6 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC85AQ96PX6 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC85AQ96PX6 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC85AQ96PX6 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
CCDC85AQ96PX6 SCN1A-220ENST00000641603 12506 ntBASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 BX322639.1-202ENST00000423987 2213 ntBASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 SNORD115-8-201ENST00000363856 82 ntBASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 SNORD115-38-201ENST00000365037 82 ntBASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 Y_RNA.331-201ENST00000365267 102 ntBASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 RNU6-898P-201ENST00000365627 104 ntBASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 Y_RNA.446-201ENST00000384178 104 ntBASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 RNU6-804P-201ENST00000384286 107 ntBASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 SNORD116-20-201ENST00000384529 92 ntBASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 RNU6-1001P-201ENST00000411265 100 ntBASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 AL358075.3-201ENST00000426289 226 ntBASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 RPL37P4-201ENST00000448908 268 ntBASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 RNU1-103P-201ENST00000516502 125 ntBASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 RNU6-1282P-201ENST00000516735 96 ntBASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 RNU6-58P-201ENST00000517143 103 ntBASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 AC022695.1-201ENST00000522089 237 ntBASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 AL391261.3-201ENST00000557194 520 ntBASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 MIR5571-201ENST00000577998 113 ntBASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 AC019159.1-201ENST00000605094 187 ntBASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 MFSD8-236ENST00000641509 4050 ntBASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC85AQ96PX6 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC85AQ96PX6 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC85AQ96PX6 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC85AQ96PX6 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC85AQ96PX6 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CCDC85AQ96PX6 MIR208A-201ENST00000362287 71 ntBASIC4.88□□□□□ -1.63
CCDC85AQ96PX6 RNA5SP197-201ENST00000363357 119 ntBASIC4.88□□□□□ -1.63
CCDC85AQ96PX6 SNORA7.2-201ENST00000364446 145 ntBASIC4.88□□□□□ -1.63
CCDC85AQ96PX6 SNORA57.3-201ENST00000411095 141 ntBASIC4.88□□□□□ -1.63
CCDC85AQ96PX6 HLA-N-201ENST00000437516 135 ntBASIC4.88□□□□□ -1.63
CCDC85AQ96PX6 RPL30P5-201ENST00000494923 336 ntBASIC4.88□□□□□ -1.63
CCDC85AQ96PX6 AC016632.1-201ENST00000503994 196 ntBASIC4.88□□□□□ -1.63
CCDC85AQ96PX6 AC091874.1-201ENST00000511402 339 ntBASIC4.88□□□□□ -1.63
CCDC85AQ96PX6 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.88□□□□□ -1.63
CCDC85AQ96PX6 CR383656.8-201ENST00000549046 145 ntBASIC4.88□□□□□ -1.63
CCDC85AQ96PX6 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC85AQ96PX6 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC85AQ96PX6 AC005176.2-201ENST00000596933 147 ntBASIC4.88□□□□□ -1.63
CCDC85AQ96PX6 FTX_3.1-201ENST00000610451 147 ntBASIC4.88□□□□□ -1.63
CCDC85AQ96PX6 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC85AQ96PX6 AC022336.2-201ENST00000568966 2538 ntBASIC4.88□□□□□ -1.63
CCDC85AQ96PX6 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC85AQ96PX6 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC85AQ96PX6 SRP72P2-201ENST00000344851 1979 ntBASIC4.87□□□□□ -1.63
CCDC85AQ96PX6 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC85AQ96PX6 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC85AQ96PX6 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CCDC85AQ96PX6 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC85AQ96PX6 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC85AQ96PX6 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CCDC85AQ96PX6 FTLP6-201ENST00000355274 422 ntBASIC4.87□□□□□ -1.63
CCDC85AQ96PX6 Y_RNA.8-201ENST00000362353 102 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 186.3 ms