Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
CDH20Q9HBT6 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.65■□□□□ 0.26
CDH20Q9HBT6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH20Q9HBT6 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH20Q9HBT6 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH20Q9HBT6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CDH20Q9HBT6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH20Q9HBT6 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH20Q9HBT6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH20Q9HBT6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH20Q9HBT6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.65■□□□□ 0.26
CDH20Q9HBT6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH20Q9HBT6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.65■□□□□ 0.26
CDH20Q9HBT6 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.65■□□□□ 0.26
CDH20Q9HBT6 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
CDH20Q9HBT6 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CDH20Q9HBT6 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
CDH20Q9HBT6 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH20Q9HBT6 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH20Q9HBT6 AC093484.2-201ENST00000580996 2166 ntBASIC16.65■□□□□ 0.26
CDH20Q9HBT6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH20Q9HBT6 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CDH20Q9HBT6 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH20Q9HBT6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH20Q9HBT6 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH20Q9HBT6 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CDH20Q9HBT6 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH20Q9HBT6 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
CDH20Q9HBT6 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.65■□□□□ 0.26
CDH20Q9HBT6 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH20Q9HBT6 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH20Q9HBT6 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CDH20Q9HBT6 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH20Q9HBT6 AC020763.4-201ENST00000623414 4170 ntBASIC16.64■□□□□ 0.25
CDH20Q9HBT6 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH20Q9HBT6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CDH20Q9HBT6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH20Q9HBT6 FAM207BP-201ENST00000447172 505 ntBASIC16.64■□□□□ 0.25
CDH20Q9HBT6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.64■□□□□ 0.25
CDH20Q9HBT6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH20Q9HBT6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH20Q9HBT6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.64■□□□□ 0.25
CDH20Q9HBT6 AP003071.4-201ENST00000562276 1284 ntBASIC16.64■□□□□ 0.25
CDH20Q9HBT6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDH20Q9HBT6 HTR7P1-202ENST00000624664 4411 ntBASIC16.64■□□□□ 0.25
CDH20Q9HBT6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.64■□□□□ 0.25
CDH20Q9HBT6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CDH20Q9HBT6 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
CDH20Q9HBT6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDH20Q9HBT6 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDH20Q9HBT6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH20Q9HBT6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 B3GAT3P1-201ENST00000471720 806 ntBASIC16.63■□□□□ 0.25
CDH20Q9HBT6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH20Q9HBT6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH20Q9HBT6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH20Q9HBT6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH20Q9HBT6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.62■□□□□ 0.25
CDH20Q9HBT6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH20Q9HBT6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH20Q9HBT6 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH20Q9HBT6 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms