Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
VPS25Q9BRG1 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.32□□□□□ -0.28
VPS25Q9BRG1 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 EFTUD1P1-204ENST00000560401 1798 ntBASIC13.31□□□□□ -0.28
VPS25Q9BRG1 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 AL162393.1-201ENST00000437852 946 ntBASIC13.31□□□□□ -0.28
VPS25Q9BRG1 AL157400.5-201ENST00000507624 621 ntBASIC13.31□□□□□ -0.28
VPS25Q9BRG1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 LINC00896-202ENST00000609602 2128 ntBASIC13.31□□□□□ -0.28
VPS25Q9BRG1 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
VPS25Q9BRG1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VPS25Q9BRG1 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
VPS25Q9BRG1 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
VPS25Q9BRG1 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VPS25Q9BRG1 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
VPS25Q9BRG1 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
VPS25Q9BRG1 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VPS25Q9BRG1 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VPS25Q9BRG1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VPS25Q9BRG1 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
VPS25Q9BRG1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VPS25Q9BRG1 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC13.3□□□□□ -0.28
VPS25Q9BRG1 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC13.3□□□□□ -0.28
VPS25Q9BRG1 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC13.3□□□□□ -0.28
VPS25Q9BRG1 AC026471.6-201ENST00000622954 1905 ntBASIC13.3□□□□□ -0.28
VPS25Q9BRG1 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VPS25Q9BRG1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC13.3□□□□□ -0.28
VPS25Q9BRG1 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
VPS25Q9BRG1 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
VPS25Q9BRG1 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VPS25Q9BRG1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VPS25Q9BRG1 REST-210ENST00000638187 1334 ntTSL 5 BASIC13.3□□□□□ -0.28
VPS25Q9BRG1 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
VPS25Q9BRG1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC13.3□□□□□ -0.28
VPS25Q9BRG1 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VPS25Q9BRG1 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VPS25Q9BRG1 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VPS25Q9BRG1 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC13.3□□□□□ -0.28
VPS25Q9BRG1 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VPS25Q9BRG1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
VPS25Q9BRG1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
VPS25Q9BRG1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
VPS25Q9BRG1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
VPS25Q9BRG1 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
VPS25Q9BRG1 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC13.29□□□□□ -0.28
VPS25Q9BRG1 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VPS25Q9BRG1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VPS25Q9BRG1 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.29□□□□□ -0.28
VPS25Q9BRG1 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VPS25Q9BRG1 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
VPS25Q9BRG1 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
VPS25Q9BRG1 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
VPS25Q9BRG1 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VPS25Q9BRG1 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
VPS25Q9BRG1 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VPS25Q9BRG1 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VPS25Q9BRG1 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.29□□□□□ -0.28
VPS25Q9BRG1 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VPS25Q9BRG1 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms