Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SFTPBP07988 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.53■□□□□ 0.24
SFTPBP07988 AL158047.1-201ENST00000445918 881 ntBASIC16.53■□□□□ 0.24
SFTPBP07988 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.53■□□□□ 0.24
SFTPBP07988 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.53■□□□□ 0.24
SFTPBP07988 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.53■□□□□ 0.24
SFTPBP07988 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
SFTPBP07988 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SFTPBP07988 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SFTPBP07988 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.53■□□□□ 0.24
SFTPBP07988 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SFTPBP07988 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SFTPBP07988 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.53■□□□□ 0.24
SFTPBP07988 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.53■□□□□ 0.24
SFTPBP07988 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SFTPBP07988 LINC01465-201ENST00000408887 1940 ntBASIC16.53■□□□□ 0.24
SFTPBP07988 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SFTPBP07988 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.53■□□□□ 0.24
SFTPBP07988 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SFTPBP07988 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SFTPBP07988 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SFTPBP07988 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SFTPBP07988 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.52■□□□□ 0.24
SFTPBP07988 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.52■□□□□ 0.24
SFTPBP07988 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
SFTPBP07988 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SFTPBP07988 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SFTPBP07988 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SFTPBP07988 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SFTPBP07988 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SFTPBP07988 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
SFTPBP07988 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
SFTPBP07988 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SFTPBP07988 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SFTPBP07988 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
SFTPBP07988 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SFTPBP07988 KRT17P3-201ENST00000420566 1262 ntBASIC16.52■□□□□ 0.24
SFTPBP07988 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.52■□□□□ 0.24
SFTPBP07988 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.52■□□□□ 0.24
SFTPBP07988 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SFTPBP07988 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.52■□□□□ 0.24
SFTPBP07988 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.52■□□□□ 0.24
SFTPBP07988 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.52■□□□□ 0.24
SFTPBP07988 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.52■□□□□ 0.24
SFTPBP07988 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.52■□□□□ 0.24
SFTPBP07988 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SFTPBP07988 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SFTPBP07988 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.52■□□□□ 0.23
SFTPBP07988 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
SFTPBP07988 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SFTPBP07988 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SFTPBP07988 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SFTPBP07988 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.51■□□□□ 0.23
SFTPBP07988 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
SFTPBP07988 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SFTPBP07988 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SFTPBP07988 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SFTPBP07988 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SFTPBP07988 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.51■□□□□ 0.23
SFTPBP07988 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.51■□□□□ 0.23
SFTPBP07988 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SFTPBP07988 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SFTPBP07988 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SFTPBP07988 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SFTPBP07988 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
SFTPBP07988 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SFTPBP07988 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SFTPBP07988 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SFTPBP07988 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SFTPBP07988 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.51■□□□□ 0.23
SFTPBP07988 GCSHP5-201ENST00000443090 522 ntBASIC16.51■□□□□ 0.23
SFTPBP07988 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SFTPBP07988 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.51■□□□□ 0.23
SFTPBP07988 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.51■□□□□ 0.23
SFTPBP07988 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.51■□□□□ 0.23
SFTPBP07988 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SFTPBP07988 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.51■□□□□ 0.23
SFTPBP07988 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.51■□□□□ 0.23
SFTPBP07988 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SFTPBP07988 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SFTPBP07988 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.51■□□□□ 0.23
SFTPBP07988 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SFTPBP07988 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SFTPBP07988 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.51■□□□□ 0.23
SFTPBP07988 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.51■□□□□ 0.23
SFTPBP07988 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SFTPBP07988 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SFTPBP07988 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SFTPBP07988 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SFTPBP07988 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SFTPBP07988 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.5■□□□□ 0.23
SFTPBP07988 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SFTPBP07988 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.5■□□□□ 0.23
SFTPBP07988 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.5■□□□□ 0.23
SFTPBP07988 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SFTPBP07988 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SFTPBP07988 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SFTPBP07988 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SFTPBP07988 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.5■□□□□ 0.23
SFTPBP07988 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms