Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COPS3Q9UNS2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
COPS3Q9UNS2 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
COPS3Q9UNS2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.53■■□□□ 1.2
COPS3Q9UNS2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COPS3Q9UNS2 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC22.53■■□□□ 1.2
COPS3Q9UNS2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COPS3Q9UNS2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
COPS3Q9UNS2 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COPS3Q9UNS2 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC22.52■■□□□ 1.2
COPS3Q9UNS2 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
COPS3Q9UNS2 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COPS3Q9UNS2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC22.52■■□□□ 1.2
COPS3Q9UNS2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.52■■□□□ 1.2
COPS3Q9UNS2 AP002414.2-202ENST00000590929 1450 ntBASIC22.52■■□□□ 1.2
COPS3Q9UNS2 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COPS3Q9UNS2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COPS3Q9UNS2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COPS3Q9UNS2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COPS3Q9UNS2 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC22.51■■□□□ 1.19
COPS3Q9UNS2 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
COPS3Q9UNS2 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
COPS3Q9UNS2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.5■■□□□ 1.19
COPS3Q9UNS2 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
COPS3Q9UNS2 CHML-205ENST00000638160 705 ntTSL 3 BASIC22.5■■□□□ 1.19
COPS3Q9UNS2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COPS3Q9UNS2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.5■■□□□ 1.19
COPS3Q9UNS2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.5■■□□□ 1.19
COPS3Q9UNS2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
COPS3Q9UNS2 RPS2-209ENST00000529806 993 ntTSL 3 BASIC22.49■■□□□ 1.19
COPS3Q9UNS2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
COPS3Q9UNS2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.49■■□□□ 1.19
COPS3Q9UNS2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
COPS3Q9UNS2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
COPS3Q9UNS2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.48■■□□□ 1.19
COPS3Q9UNS2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COPS3Q9UNS2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.48■■□□□ 1.19
COPS3Q9UNS2 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC22.48■■□□□ 1.19
COPS3Q9UNS2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.48■■□□□ 1.19
COPS3Q9UNS2 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COPS3Q9UNS2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.47■■□□□ 1.19
COPS3Q9UNS2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
COPS3Q9UNS2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
COPS3Q9UNS2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
COPS3Q9UNS2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COPS3Q9UNS2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COPS3Q9UNS2 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COPS3Q9UNS2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.46■■□□□ 1.19
COPS3Q9UNS2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COPS3Q9UNS2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COPS3Q9UNS2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
COPS3Q9UNS2 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COPS3Q9UNS2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COPS3Q9UNS2 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC22.44■■□□□ 1.18
COPS3Q9UNS2 AC135983.2-203ENST00000454486 1613 ntBASIC22.44■■□□□ 1.18
COPS3Q9UNS2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COPS3Q9UNS2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
COPS3Q9UNS2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
COPS3Q9UNS2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.43■■□□□ 1.18
COPS3Q9UNS2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
COPS3Q9UNS2 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COPS3Q9UNS2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COPS3Q9UNS2 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
COPS3Q9UNS2 SUZ12P1-203ENST00000578195 985 ntBASIC22.42■■□□□ 1.18
COPS3Q9UNS2 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC22.42■■□□□ 1.18
COPS3Q9UNS2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.42■■□□□ 1.18
COPS3Q9UNS2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
COPS3Q9UNS2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.41■■□□□ 1.18
COPS3Q9UNS2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
COPS3Q9UNS2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COPS3Q9UNS2 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COPS3Q9UNS2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COPS3Q9UNS2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
COPS3Q9UNS2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.4■■□□□ 1.18
COPS3Q9UNS2 WHAMMP2-203ENST00000563942 1603 ntBASIC22.4■■□□□ 1.18
COPS3Q9UNS2 AC005559.1-201ENST00000589661 871 ntBASIC22.4■■□□□ 1.18
COPS3Q9UNS2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COPS3Q9UNS2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
COPS3Q9UNS2 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC22.39■■□□□ 1.17
COPS3Q9UNS2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22.39■■□□□ 1.17
COPS3Q9UNS2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.38■■□□□ 1.17
COPS3Q9UNS2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
COPS3Q9UNS2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.38■■□□□ 1.17
COPS3Q9UNS2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.37■■□□□ 1.17
COPS3Q9UNS2 HNRNPLP2-201ENST00000568980 1570 ntBASIC22.37■■□□□ 1.17
COPS3Q9UNS2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.36■■□□□ 1.17
COPS3Q9UNS2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COPS3Q9UNS2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
COPS3Q9UNS2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
COPS3Q9UNS2 AC018358.1-201ENST00000631079 1402 ntBASIC22.36■■□□□ 1.17
COPS3Q9UNS2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
COPS3Q9UNS2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
COPS3Q9UNS2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
COPS3Q9UNS2 MIR6090-201ENST00000622481 60 ntBASIC22.35■■□□□ 1.17
COPS3Q9UNS2 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
COPS3Q9UNS2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
COPS3Q9UNS2 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COPS3Q9UNS2 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC22.34■■□□□ 1.17
COPS3Q9UNS2 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COPS3Q9UNS2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms