Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
VPS16Q9H269 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC27.88■■■□□ 2.05
VPS16Q9H269 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
VPS16Q9H269 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
VPS16Q9H269 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.87■■■□□ 2.05
VPS16Q9H269 AP002414.2-202ENST00000590929 1450 ntBASIC27.87■■■□□ 2.05
VPS16Q9H269 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.86■■■□□ 2.05
VPS16Q9H269 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC27.86■■■□□ 2.05
VPS16Q9H269 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.85■■■□□ 2.05
VPS16Q9H269 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC27.85■■■□□ 2.05
VPS16Q9H269 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC27.85■■■□□ 2.05
VPS16Q9H269 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
VPS16Q9H269 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
VPS16Q9H269 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC27.84■■■□□ 2.05
VPS16Q9H269 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
VPS16Q9H269 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
VPS16Q9H269 AC135983.2-203ENST00000454486 1613 ntBASIC27.84■■■□□ 2.05
VPS16Q9H269 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
VPS16Q9H269 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC27.83■■■□□ 2.04
VPS16Q9H269 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC27.82■■■□□ 2.04
VPS16Q9H269 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
VPS16Q9H269 MIR6090-201ENST00000622481 60 ntBASIC27.82■■■□□ 2.04
VPS16Q9H269 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
VPS16Q9H269 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
VPS16Q9H269 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
VPS16Q9H269 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
VPS16Q9H269 AC108673.1-201ENST00000510422 1159 ntBASIC27.8■■■□□ 2.04
VPS16Q9H269 MEST-211ENST00000437945 1455 ntTSL 5 BASIC27.8■■■□□ 2.04
VPS16Q9H269 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
VPS16Q9H269 WHAMMP2-203ENST00000563942 1603 ntBASIC27.8■■■□□ 2.04
VPS16Q9H269 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
VPS16Q9H269 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
VPS16Q9H269 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC27.79■■■□□ 2.04
VPS16Q9H269 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC27.79■■■□□ 2.04
VPS16Q9H269 DUX4L28-201ENST00000623687 678 ntBASIC27.79■■■□□ 2.04
VPS16Q9H269 PKM-203ENST00000389093 2279 ntTSL 5 BASIC27.79■■■□□ 2.04
VPS16Q9H269 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
VPS16Q9H269 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
VPS16Q9H269 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
VPS16Q9H269 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
VPS16Q9H269 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
VPS16Q9H269 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
VPS16Q9H269 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
VPS16Q9H269 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC27.76■■■□□ 2.03
VPS16Q9H269 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
VPS16Q9H269 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC27.75■■■□□ 2.03
VPS16Q9H269 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
VPS16Q9H269 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC27.75■■■□□ 2.03
VPS16Q9H269 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
VPS16Q9H269 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
VPS16Q9H269 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
VPS16Q9H269 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
VPS16Q9H269 CREM-210ENST00000374721 2020 ntTSL 5 BASIC27.74■■■□□ 2.03
VPS16Q9H269 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
VPS16Q9H269 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC27.74■■■□□ 2.03
VPS16Q9H269 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC27.74■■■□□ 2.03
VPS16Q9H269 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC27.73■■■□□ 2.03
VPS16Q9H269 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
VPS16Q9H269 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.73■■■□□ 2.03
VPS16Q9H269 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC27.72■■■□□ 2.03
VPS16Q9H269 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
VPS16Q9H269 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
VPS16Q9H269 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC27.71■■■□□ 2.03
VPS16Q9H269 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC27.71■■■□□ 2.03
VPS16Q9H269 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.7■■■□□ 2.02
VPS16Q9H269 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
VPS16Q9H269 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
VPS16Q9H269 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC27.69■■■□□ 2.02
VPS16Q9H269 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
VPS16Q9H269 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC27.69■■■□□ 2.02
VPS16Q9H269 LINC00273-201ENST00000539813 1452 ntBASIC27.69■■■□□ 2.02
VPS16Q9H269 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC27.68■■■□□ 2.02
VPS16Q9H269 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
VPS16Q9H269 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
VPS16Q9H269 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC27.67■■■□□ 2.02
VPS16Q9H269 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC27.67■■■□□ 2.02
VPS16Q9H269 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC27.67■■■□□ 2.02
VPS16Q9H269 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC27.67■■■□□ 2.02
VPS16Q9H269 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC27.67■■■□□ 2.02
VPS16Q9H269 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC27.67■■■□□ 2.02
VPS16Q9H269 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
VPS16Q9H269 SHF-207ENST00000560540 2062 ntTSL 5 BASIC27.66■■■□□ 2.02
VPS16Q9H269 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC27.65■■■□□ 2.02
VPS16Q9H269 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC27.65■■■□□ 2.02
VPS16Q9H269 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC27.65■■■□□ 2.02
VPS16Q9H269 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
VPS16Q9H269 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC27.65■■■□□ 2.02
VPS16Q9H269 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
VPS16Q9H269 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC27.65■■■□□ 2.02
VPS16Q9H269 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC27.65■■■□□ 2.02
VPS16Q9H269 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
VPS16Q9H269 AC018358.1-201ENST00000631079 1402 ntBASIC27.65■■■□□ 2.02
VPS16Q9H269 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
VPS16Q9H269 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
VPS16Q9H269 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC27.64■■■□□ 2.02
VPS16Q9H269 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC27.64■■■□□ 2.02
VPS16Q9H269 MIR3665-201ENST00000578708 105 ntBASIC27.64■■■□□ 2.02
VPS16Q9H269 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
VPS16Q9H269 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
VPS16Q9H269 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms