Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
RTN4IP1Q8WWV3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.21■□□□□ 0.99
RTN4IP1Q8WWV3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RTN4IP1Q8WWV3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
RTN4IP1Q8WWV3 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.21■□□□□ 0.99
RTN4IP1Q8WWV3 LINC01003-201ENST00000564834 1764 ntBASIC21.2■□□□□ 0.99
RTN4IP1Q8WWV3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTN4IP1Q8WWV3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTN4IP1Q8WWV3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTN4IP1Q8WWV3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTN4IP1Q8WWV3 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.2■□□□□ 0.98
RTN4IP1Q8WWV3 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.2■□□□□ 0.98
RTN4IP1Q8WWV3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTN4IP1Q8WWV3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RTN4IP1Q8WWV3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTN4IP1Q8WWV3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RTN4IP1Q8WWV3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTN4IP1Q8WWV3 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTN4IP1Q8WWV3 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.19■□□□□ 0.98
RTN4IP1Q8WWV3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTN4IP1Q8WWV3 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTN4IP1Q8WWV3 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTN4IP1Q8WWV3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RTN4IP1Q8WWV3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.18■□□□□ 0.98
RTN4IP1Q8WWV3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTN4IP1Q8WWV3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTN4IP1Q8WWV3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTN4IP1Q8WWV3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTN4IP1Q8WWV3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTN4IP1Q8WWV3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTN4IP1Q8WWV3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RTN4IP1Q8WWV3 AC135731.1-201ENST00000569415 2548 ntBASIC21.16■□□□□ 0.98
RTN4IP1Q8WWV3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
RTN4IP1Q8WWV3 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTN4IP1Q8WWV3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
RTN4IP1Q8WWV3 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RTN4IP1Q8WWV3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.16■□□□□ 0.98
RTN4IP1Q8WWV3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.15■□□□□ 0.98
RTN4IP1Q8WWV3 AL162393.1-201ENST00000437852 946 ntBASIC21.15■□□□□ 0.98
RTN4IP1Q8WWV3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.15■□□□□ 0.98
RTN4IP1Q8WWV3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTN4IP1Q8WWV3 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RTN4IP1Q8WWV3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RTN4IP1Q8WWV3 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTN4IP1Q8WWV3 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.14■□□□□ 0.97
RTN4IP1Q8WWV3 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTN4IP1Q8WWV3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.14■□□□□ 0.97
RTN4IP1Q8WWV3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RTN4IP1Q8WWV3 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RTN4IP1Q8WWV3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTN4IP1Q8WWV3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RTN4IP1Q8WWV3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.12■□□□□ 0.97
RTN4IP1Q8WWV3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTN4IP1Q8WWV3 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTN4IP1Q8WWV3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTN4IP1Q8WWV3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
RTN4IP1Q8WWV3 AC108673.1-201ENST00000510422 1159 ntBASIC21.11■□□□□ 0.97
RTN4IP1Q8WWV3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.11■□□□□ 0.97
RTN4IP1Q8WWV3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.11■□□□□ 0.97
RTN4IP1Q8WWV3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.11■□□□□ 0.97
RTN4IP1Q8WWV3 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTN4IP1Q8WWV3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.11■□□□□ 0.97
RTN4IP1Q8WWV3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
RTN4IP1Q8WWV3 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.1■□□□□ 0.97
RTN4IP1Q8WWV3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTN4IP1Q8WWV3 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTN4IP1Q8WWV3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTN4IP1Q8WWV3 AC127502.1-201ENST00000399971 1502 ntBASIC21.09■□□□□ 0.97
RTN4IP1Q8WWV3 AC087741.3-201ENST00000624270 1347 ntBASIC21.09■□□□□ 0.97
RTN4IP1Q8WWV3 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTN4IP1Q8WWV3 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.09■□□□□ 0.97
RTN4IP1Q8WWV3 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.09■□□□□ 0.97
RTN4IP1Q8WWV3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RTN4IP1Q8WWV3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RTN4IP1Q8WWV3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.08■□□□□ 0.97
RTN4IP1Q8WWV3 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
RTN4IP1Q8WWV3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTN4IP1Q8WWV3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTN4IP1Q8WWV3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTN4IP1Q8WWV3 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RTN4IP1Q8WWV3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.06■□□□□ 0.96
RTN4IP1Q8WWV3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.06■□□□□ 0.96
RTN4IP1Q8WWV3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RTN4IP1Q8WWV3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
RTN4IP1Q8WWV3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTN4IP1Q8WWV3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RTN4IP1Q8WWV3 AL449106.1-201ENST00000608517 1980 ntBASIC21.05■□□□□ 0.96
RTN4IP1Q8WWV3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.05■□□□□ 0.96
RTN4IP1Q8WWV3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.04■□□□□ 0.96
RTN4IP1Q8WWV3 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RTN4IP1Q8WWV3 MIR6090-201ENST00000622481 60 ntBASIC21.04■□□□□ 0.96
RTN4IP1Q8WWV3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.04■□□□□ 0.96
RTN4IP1Q8WWV3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTN4IP1Q8WWV3 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.03■□□□□ 0.96
RTN4IP1Q8WWV3 AC044849.2-201ENST00000606596 710 ntBASIC21.03■□□□□ 0.96
RTN4IP1Q8WWV3 AC100797.4-201ENST00000631653 1827 ntBASIC21.03■□□□□ 0.96
RTN4IP1Q8WWV3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTN4IP1Q8WWV3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RTN4IP1Q8WWV3 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.02■□□□□ 0.96
RTN4IP1Q8WWV3 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms