Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 AL390728.6-201ENST00000566446 1246 ntBASIC28.47■■■□□ 2.15
PPP4R3CPQ6ZMV5 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
PPP4R3CPQ6ZMV5 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.46■■■□□ 2.15
PPP4R3CPQ6ZMV5 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC28.46■■■□□ 2.15
PPP4R3CPQ6ZMV5 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
PPP4R3CPQ6ZMV5 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC28.45■■■□□ 2.15
PPP4R3CPQ6ZMV5 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
PPP4R3CPQ6ZMV5 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.14
PPP4R3CPQ6ZMV5 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC28.45■■■□□ 2.14
PPP4R3CPQ6ZMV5 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC28.45■■■□□ 2.14
PPP4R3CPQ6ZMV5 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC28.44■■■□□ 2.14
PPP4R3CPQ6ZMV5 AGPS-202ENST00000409888 815 ntTSL 4 BASIC28.44■■■□□ 2.14
PPP4R3CPQ6ZMV5 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC28.44■■■□□ 2.14
PPP4R3CPQ6ZMV5 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.43■■■□□ 2.14
PPP4R3CPQ6ZMV5 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PPP4R3CPQ6ZMV5 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.43■■■□□ 2.14
PPP4R3CPQ6ZMV5 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.43■■■□□ 2.14
PPP4R3CPQ6ZMV5 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
PPP4R3CPQ6ZMV5 MBP-237ENST00000579129 1052 ntTSL 5 BASIC28.43■■■□□ 2.14
PPP4R3CPQ6ZMV5 BNIP3P41-202ENST00000616656 861 ntBASIC28.43■■■□□ 2.14
PPP4R3CPQ6ZMV5 CFTRP2-201ENST00000634304 199 ntBASIC28.43■■■□□ 2.14
PPP4R3CPQ6ZMV5 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
PPP4R3CPQ6ZMV5 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
PPP4R3CPQ6ZMV5 HLA-V-202ENST00000446817 847 ntBASIC28.42■■■□□ 2.14
PPP4R3CPQ6ZMV5 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC28.42■■■□□ 2.14
PPP4R3CPQ6ZMV5 MIR3648-2-201ENST00000581792 180 ntBASIC28.42■■■□□ 2.14
PPP4R3CPQ6ZMV5 MIR3648-1-201ENST00000615959 180 ntBASIC28.42■■■□□ 2.14
PPP4R3CPQ6ZMV5 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
PPP4R3CPQ6ZMV5 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
PPP4R3CPQ6ZMV5 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC28.41■■■□□ 2.14
PPP4R3CPQ6ZMV5 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.41■■■□□ 2.14
PPP4R3CPQ6ZMV5 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
PPP4R3CPQ6ZMV5 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
PPP4R3CPQ6ZMV5 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
PPP4R3CPQ6ZMV5 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC28.4■■■□□ 2.14
PPP4R3CPQ6ZMV5 CR559946.2-201ENST00000623684 991 ntBASIC28.4■■■□□ 2.14
PPP4R3CPQ6ZMV5 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
PPP4R3CPQ6ZMV5 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
PPP4R3CPQ6ZMV5 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC28.4■■■□□ 2.14
PPP4R3CPQ6ZMV5 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC28.4■■■□□ 2.14
PPP4R3CPQ6ZMV5 RN7SL832P-201ENST00000607781 1756 ntBASIC28.39■■■□□ 2.14
PPP4R3CPQ6ZMV5 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
PPP4R3CPQ6ZMV5 DUX4L13-201ENST00000554103 1267 ntBASIC28.39■■■□□ 2.14
PPP4R3CPQ6ZMV5 DUX4L15-201ENST00000611059 1267 ntBASIC28.39■■■□□ 2.14
PPP4R3CPQ6ZMV5 DUX4L23-201ENST00000615195 1269 ntBASIC28.39■■■□□ 2.14
PPP4R3CPQ6ZMV5 DUX4L24-201ENST00000617576 1269 ntBASIC28.39■■■□□ 2.14
PPP4R3CPQ6ZMV5 DUX4L22-201ENST00000618238 1269 ntBASIC28.39■■■□□ 2.14
PPP4R3CPQ6ZMV5 DUX4L20-201ENST00000619712 1269 ntBASIC28.39■■■□□ 2.14
PPP4R3CPQ6ZMV5 DUX4L21-201ENST00000622058 1269 ntBASIC28.39■■■□□ 2.14
PPP4R3CPQ6ZMV5 DUX4L10-201ENST00000622460 1267 ntBASIC28.39■■■□□ 2.14
PPP4R3CPQ6ZMV5 DUX4L25-201ENST00000624915 1269 ntBASIC28.39■■■□□ 2.14
PPP4R3CPQ6ZMV5 GDI1-215ENST00000630693 786 ntTSL 4 BASIC28.39■■■□□ 2.14
PPP4R3CPQ6ZMV5 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
PPP4R3CPQ6ZMV5 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PPP4R3CPQ6ZMV5 AC142086.6-201ENST00000621154 1765 ntBASIC28.37■■■□□ 2.13
PPP4R3CPQ6ZMV5 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
PPP4R3CPQ6ZMV5 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC28.37■■■□□ 2.13
PPP4R3CPQ6ZMV5 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.37■■■□□ 2.13
PPP4R3CPQ6ZMV5 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PPP4R3CPQ6ZMV5 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
PPP4R3CPQ6ZMV5 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
PPP4R3CPQ6ZMV5 DRD5P2-201ENST00000421395 2012 ntBASIC28.35■■■□□ 2.13
PPP4R3CPQ6ZMV5 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PPP4R3CPQ6ZMV5 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.35■■■□□ 2.13
PPP4R3CPQ6ZMV5 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.35■■■□□ 2.13
PPP4R3CPQ6ZMV5 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
PPP4R3CPQ6ZMV5 AC135983.2-203ENST00000454486 1613 ntBASIC28.35■■■□□ 2.13
PPP4R3CPQ6ZMV5 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
PPP4R3CPQ6ZMV5 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PPP4R3CPQ6ZMV5 AC016575.1-201ENST00000607026 382 ntBASIC28.34■■■□□ 2.13
PPP4R3CPQ6ZMV5 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC28.34■■■□□ 2.13
PPP4R3CPQ6ZMV5 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PPP4R3CPQ6ZMV5 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC28.33■■■□□ 2.13
PPP4R3CPQ6ZMV5 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PPP4R3CPQ6ZMV5 MIR639-201ENST00000384974 98 ntBASIC28.33■■■□□ 2.13
PPP4R3CPQ6ZMV5 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC28.33■■■□□ 2.13
PPP4R3CPQ6ZMV5 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
PPP4R3CPQ6ZMV5 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
PPP4R3CPQ6ZMV5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
PPP4R3CPQ6ZMV5 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PPP4R3CPQ6ZMV5 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC28.32■■■□□ 2.12
PPP4R3CPQ6ZMV5 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC28.31■■■□□ 2.12
PPP4R3CPQ6ZMV5 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
PPP4R3CPQ6ZMV5 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
PPP4R3CPQ6ZMV5 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC28.3■■■□□ 2.12
PPP4R3CPQ6ZMV5 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PPP4R3CPQ6ZMV5 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PPP4R3CPQ6ZMV5 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
PPP4R3CPQ6ZMV5 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC28.3■■■□□ 2.12
PPP4R3CPQ6ZMV5 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC28.29■■■□□ 2.12
PPP4R3CPQ6ZMV5 WHAMMP2-203ENST00000563942 1603 ntBASIC28.29■■■□□ 2.12
PPP4R3CPQ6ZMV5 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
PPP4R3CPQ6ZMV5 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PPP4R3CPQ6ZMV5 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PPP4R3CPQ6ZMV5 AC022726.2-201ENST00000634673 547 ntBASIC28.28■■■□□ 2.12
PPP4R3CPQ6ZMV5 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC28.27■■■□□ 2.12
PPP4R3CPQ6ZMV5 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC28.27■■■□□ 2.12
PPP4R3CPQ6ZMV5 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
PPP4R3CPQ6ZMV5 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC28.26■■■□□ 2.12
PPP4R3CPQ6ZMV5 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC28.26■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms