Protein–RNA interactions for Protein: Q01560

NPL3, Nucleolar protein 3, yeastyeast

Known RBP RIP-Chip data

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NPL3Q01560 YMR210WYMR210W 1350 nt7.86□□□□□ -1.15
NPL3Q01560 SGV1YPR161C 1974 nt7.86□□□□□ -1.15
NPL3Q01560 PET18YCR020C 648 nt7.85□□□□□ -1.15
NPL3Q01560 PDC6YGR087C 1692 nt7.85□□□□□ -1.15
NPL3Q01560 HOG1YLR113W 1308 nt7.84□□□□□ -1.15
NPL3Q01560 YPT31YER031C 672 nt7.84□□□□□ -1.15
NPL3Q01560 ADE16YLR028C 1776 nt7.84□□□□□ -1.15
NPL3Q01560 FRA1YLL029W 2250 nt7.83□□□□□ -1.16 RIP-Chip
NPL3Q01560 GRH1YDR517W 1119 nt7.83□□□□□ -1.16 RIP-Chip
NPL3Q01560 ORM1YGR038W 669 nt7.83□□□□□ -1.16
NPL3Q01560 MFT1YML062C 1179 nt7.83□□□□□ -1.16
NPL3Q01560 RNA170RNA170 169 nt7.83□□□□□ -1.16
NPL3Q01560 snR4snR4 186 nt7.83□□□□□ -1.16
NPL3Q01560 YPR084WYPR084W 1371 nt7.83□□□□□ -1.16
NPL3Q01560 SIR2YDL042C 1689 nt7.83□□□□□ -1.16
NPL3Q01560 DUR3YHL016C 2208 nt7.82□□□□□ -1.16
NPL3Q01560 FET5YFL041W 1869 nt7.81□□□□□ -1.16
NPL3Q01560 BUD31YCR063W 474 nt7.81□□□□□ -1.16 RIP-Chip
NPL3Q01560 snR86snR86 1004 nt7.81□□□□□ -1.16
NPL3Q01560 RHO1YPR165W 630 nt7.81□□□□□ -1.16
NPL3Q01560 YBR056WYBR056W 1506 nt7.81□□□□□ -1.16
NPL3Q01560 UTP6YDR449C 1323 nt7.79□□□□□ -1.16
NPL3Q01560 RPS6AYPL090C 711 nt7.79□□□□□ -1.16
NPL3Q01560 RPS6BYBR181C 711 nt7.79□□□□□ -1.16
NPL3Q01560 THI73YLR004C 1572 nt7.79□□□□□ -1.16
NPL3Q01560 TOM71YHR117W 1920 nt7.78□□□□□ -1.16
NPL3Q01560 YER156CYER156C 1017 nt7.78□□□□□ -1.16
NPL3Q01560 BXI1YNL305C 894 nt7.78□□□□□ -1.16 RIP-Chip
NPL3Q01560 MEP1YGR121C 1479 nt7.78□□□□□ -1.16
NPL3Q01560 DUS3YLR401C 2007 nt7.78□□□□□ -1.16
NPL3Q01560 INP54YOL065C 1155 nt7.77□□□□□ -1.17
NPL3Q01560 SLD7YOR060C 774 nt7.77□□□□□ -1.17 RIP-Chip
NPL3Q01560 MET30YIL046W 1923 nt7.77□□□□□ -1.17
NPL3Q01560 YRF1-3YGR296W 5580 nt7.76□□□□□ -1.17
NPL3Q01560 YRF1-6YNL339C 5580 nt7.76□□□□□ -1.17
NPL3Q01560 YRF1-7YPL283C 5580 nt7.76□□□□□ -1.17
NPL3Q01560 UTR5YEL035C 501 nt7.76□□□□□ -1.17
NPL3Q01560 OCA1YNL099C 717 nt7.76□□□□□ -1.17 RIP-Chip
NPL3Q01560 TRP2YER090W 1524 nt7.76□□□□□ -1.17
NPL3Q01560 CIT3YPR001W 1461 nt7.75□□□□□ -1.17 RIP-Chip
NPL3Q01560 YRF1-1YDR545W 5391 nt7.75□□□□□ -1.17
NPL3Q01560 YRF1-5YLR467W 5391 nt7.75□□□□□ -1.17
NPL3Q01560 YRF1-8YOR396W 5391 nt7.75□□□□□ -1.17
NPL3Q01560 THI6YPL214C 1623 nt7.75□□□□□ -1.17
NPL3Q01560 PUP3YER094C 618 nt7.75□□□□□ -1.17 RIP-Chip
NPL3Q01560 OST3YOR085W 1053 nt7.75□□□□□ -1.17 RIP-Chip
NPL3Q01560 MRP1YDR347W 966 nt7.74□□□□□ -1.17
NPL3Q01560 ADA2YDR448W 1305 nt7.74□□□□□ -1.17
NPL3Q01560 YOR300WYOR300W 309 nt7.73□□□□□ -1.17
NPL3Q01560 ALG7YBR243C 1347 nt7.73□□□□□ -1.17
NPL3Q01560 ATG23YLR431C 1362 nt7.72□□□□□ -1.17
NPL3Q01560 PFS2YNL317W 1398 nt7.72□□□□□ -1.17
NPL3Q01560 GDH1YOR375C 1365 nt7.72□□□□□ -1.17
NPL3Q01560 COS6YGR295C 1146 nt7.72□□□□□ -1.17
NPL3Q01560 NSG2YNL156C 900 nt7.71□□□□□ -1.18
NPL3Q01560 SHC1YER096W 1539 nt7.7□□□□□ -1.18
NPL3Q01560 MRS3YJL133W 945 nt7.7□□□□□ -1.18 RIP-Chip
NPL3Q01560 RCF1YML030W 480 nt7.7□□□□□ -1.18
NPL3Q01560 YNL190WYNL190W 615 nt7.7□□□□□ -1.18
NPL3Q01560 YHL030W-AYHL030W-A 462 nt7.69□□□□□ -1.18
NPL3Q01560 BMT5YIL096C 1011 nt7.69□□□□□ -1.18
NPL3Q01560 TAD2YJL035C 753 nt7.69□□□□□ -1.18
NPL3Q01560 TDH1YJL052W 999 nt7.69□□□□□ -1.18 RIP-Chip
NPL3Q01560 YJL107CYJL107C 1164 nt7.69□□□□□ -1.18
NPL3Q01560 CWC25YNL245C 540 nt7.69□□□□□ -1.18 RIP-Chip
NPL3Q01560 PRE10YOR362C 867 nt7.69□□□□□ -1.18 RIP-Chip
NPL3Q01560 ELP4YPL101W 1371 nt7.69□□□□□ -1.18
NPL3Q01560 EHT1YBR177C 1356 nt7.69□□□□□ -1.18
NPL3Q01560 HXT11YOL156W 1704 nt7.69□□□□□ -1.18
NPL3Q01560 ATP2YJR121W 1536 nt7.68□□□□□ -1.18
NPL3Q01560 NDE2YDL085W 1638 nt7.68□□□□□ -1.18
NPL3Q01560 tL(UAA)B1tL(UAA)B1 84 nt7.68□□□□□ -1.18
NPL3Q01560 tL(UAA)B2tL(UAA)B2 84 nt7.68□□□□□ -1.18
NPL3Q01560 tL(UAA)DtL(UAA)D 84 nt7.68□□□□□ -1.18
NPL3Q01560 SUP51tL(UAA)J 84 nt7.68□□□□□ -1.18
NPL3Q01560 tL(UAA)KtL(UAA)K 84 nt7.68□□□□□ -1.18
NPL3Q01560 tL(UAA)LtL(UAA)L 84 nt7.68□□□□□ -1.18
NPL3Q01560 tL(UAA)NtL(UAA)N 84 nt7.68□□□□□ -1.18
NPL3Q01560 PMU1YKL128C 888 nt7.68□□□□□ -1.18
NPL3Q01560 HIS3YOR202W 663 nt7.68□□□□□ -1.18 RIP-Chip
NPL3Q01560 RSM23YGL129C 1353 nt7.68□□□□□ -1.18
NPL3Q01560 YPL247CYPL247C 1572 nt7.67□□□□□ -1.18
NPL3Q01560 INO1YJL153C 1602 nt7.67□□□□□ -1.18
NPL3Q01560 ELP3YPL086C 1674 nt7.67□□□□□ -1.18
NPL3Q01560 CDC16YKL022C 2523 nt7.67□□□□□ -1.18
NPL3Q01560 LRO1YNR008W 1986 nt7.67□□□□□ -1.18
NPL3Q01560 HSV2YGR223C 1347 nt7.67□□□□□ -1.18
NPL3Q01560 YGR137WYGR137W 375 nt7.66□□□□□ -1.18
NPL3Q01560 YPR150WYPR150W 522 nt7.66□□□□□ -1.18
NPL3Q01560 ICE2YIL090W 1476 nt7.66□□□□□ -1.18
NPL3Q01560 DIA4YHR011W 1341 nt7.65□□□□□ -1.18
NPL3Q01560 YIL168WYIL168W 384 nt7.65□□□□□ -1.18
NPL3Q01560 KAE1YKR038C 1161 nt7.65□□□□□ -1.18
NPL3Q01560 AVO2YMR068W 1281 nt7.65□□□□□ -1.18
NPL3Q01560 TIM50YPL063W 1431 nt7.65□□□□□ -1.18
NPL3Q01560 COA2YPL189C-A 207 nt7.65□□□□□ -1.18 RIP-Chip
NPL3Q01560 LEA1YPL213W 717 nt7.65□□□□□ -1.18
NPL3Q01560 SLM3YDL033C 1254 nt7.64□□□□□ -1.19 RIP-Chip
NPL3Q01560 MDH2YOL126C 1134 nt7.64□□□□□ -1.19 RIP-Chip
NPL3Q01560 PRE2YPR103W 864 nt7.64□□□□□ -1.19
Retrieved 100 of 7,029 protein–RNA pairs in 91.5 ms