Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 PDC5YLR134W 1692 nt7.56□□□□□ -1.2
TDP1P38319 SHC1YER096W 1539 nt7.56□□□□□ -1.2
TDP1P38319 PUP3YER094C 618 nt7.55□□□□□ -1.2
TDP1P38319 RRT6YGL146C 936 nt7.55□□□□□ -1.2
TDP1P38319 CYC3YAL039C 810 nt7.55□□□□□ -1.2
TDP1P38319 YLR122CYLR122C 378 nt7.55□□□□□ -1.2
TDP1P38319 RHO1YPR165W 630 nt7.55□□□□□ -1.2
TDP1P38319 CBK1YNL161W 2271 nt7.55□□□□□ -1.2
TDP1P38319 RSC9YML127W 1746 nt7.55□□□□□ -1.2
TDP1P38319 YIL108WYIL108W 2091 nt7.55□□□□□ -1.2
TDP1P38319 YER152CYER152C 1332 nt7.54□□□□□ -1.2
TDP1P38319 YGR137WYGR137W 375 nt7.54□□□□□ -1.2
TDP1P38319 RIB1YBL033C 1038 nt7.54□□□□□ -1.2
TDP1P38319 ERO1YML130C 1692 nt7.54□□□□□ -1.2
TDP1P38319 PEX28YHR150W 1740 nt7.53□□□□□ -1.2
TDP1P38319 ERG6YML008C 1152 nt7.53□□□□□ -1.2
TDP1P38319 AVL9YLR114C 2295 nt7.52□□□□□ -1.21
TDP1P38319 CKB1YGL019W 837 nt7.52□□□□□ -1.21
TDP1P38319 COG1YGL223C 1254 nt7.52□□□□□ -1.21
TDP1P38319 SOD2YHR008C 702 nt7.52□□□□□ -1.21
TDP1P38319 MGM101YJR144W 810 nt7.52□□□□□ -1.21
TDP1P38319 MTC6YHR151C 1581 nt7.51□□□□□ -1.21
TDP1P38319 RUP1YOR138C 2016 nt7.51□□□□□ -1.21
TDP1P38319 CHA1YCL064C 1083 nt7.51□□□□□ -1.21
TDP1P38319 CAK1YFL029C 1107 nt7.51□□□□□ -1.21
TDP1P38319 YHL030W-AYHL030W-A 462 nt7.51□□□□□ -1.21
TDP1P38319 SNP1YIL061C 903 nt7.51□□□□□ -1.21
TDP1P38319 SPE4YLR146C 903 nt7.51□□□□□ -1.21
TDP1P38319 YCR025CYCR025C 411 nt7.5□□□□□ -1.21
TDP1P38319 YIA6YIL006W 1122 nt7.5□□□□□ -1.21
TDP1P38319 CDA1YLR307W 906 nt7.5□□□□□ -1.21
TDP1P38319 THI73YLR004C 1572 nt7.5□□□□□ -1.21
TDP1P38319 SAM50YNL026W 1455 nt7.49□□□□□ -1.21
TDP1P38319 YCP4YCR004C 744 nt7.49□□□□□ -1.21
TDP1P38319 YMR166CYMR166C 1107 nt7.49□□□□□ -1.21
TDP1P38319 BUR6YER159C 429 nt7.48□□□□□ -1.21
TDP1P38319 TES1YJR019C 1050 nt7.48□□□□□ -1.21
TDP1P38319 SNA3YJL151C 402 nt7.47□□□□□ -1.21
TDP1P38319 YLR030WYLR030W 792 nt7.45□□□□□ -1.22
TDP1P38319 ATP10YLR393W 840 nt7.45□□□□□ -1.22
TDP1P38319 LCP5YER127W 1074 nt7.44□□□□□ -1.22
TDP1P38319 SER2YGR208W 930 nt7.43□□□□□ -1.22
TDP1P38319 YGR210CYGR210C 1236 nt7.43□□□□□ -1.22
TDP1P38319 FAF1YIL019W 1041 nt7.43□□□□□ -1.22
TDP1P38319 RRT14YIL127C 621 nt7.43□□□□□ -1.22
TDP1P38319 ATO2YNR002C 849 nt7.43□□□□□ -1.22
TDP1P38319 TIM50YPL063W 1431 nt7.43□□□□□ -1.22
TDP1P38319 ERR3YMR323W 1314 nt7.42□□□□□ -1.22
TDP1P38319 ERR1YOR393W 1314 nt7.42□□□□□ -1.22
TDP1P38319 ERR2YPL281C 1314 nt7.42□□□□□ -1.22
TDP1P38319 MSB3YNL293W 1902 nt7.42□□□□□ -1.22
TDP1P38319 YBL113CYBL113C 2379 nt7.41□□□□□ -1.22
TDP1P38319 URH1YDR400W 1023 nt7.41□□□□□ -1.22
TDP1P38319 HXT13YEL069C 1695 nt7.41□□□□□ -1.22
TDP1P38319 DST1YGL043W 930 nt7.4□□□□□ -1.22
TDP1P38319 PRE10YOR362C 867 nt7.4□□□□□ -1.22
TDP1P38319 LSP1YPL004C 1026 nt7.4□□□□□ -1.22
TDP1P38319 YPL108WYPL108W 507 nt7.4□□□□□ -1.22
TDP1P38319 YTH1YPR107C 627 nt7.4□□□□□ -1.22
TDP1P38319 AOS1YPR180W 1044 nt7.4□□□□□ -1.22
TDP1P38319 HTS1YPR033C 1641 nt7.39□□□□□ -1.23
TDP1P38319 MAS2YHR024C 1449 nt7.39□□□□□ -1.23
TDP1P38319 YNL040WYNL040W 1371 nt7.39□□□□□ -1.23
TDP1P38319 SWM1YDR260C 513 nt7.39□□□□□ -1.23
TDP1P38319 TOM20YGR082W 552 nt7.39□□□□□ -1.23
TDP1P38319 YMR253CYMR253C 1245 nt7.39□□□□□ -1.23
TDP1P38319 RCF2YNR018W 675 nt7.39□□□□□ -1.23
TDP1P38319 YKR018CYKR018C 2178 nt7.39□□□□□ -1.23
TDP1P38319 JHD1YER051W 1479 nt7.38□□□□□ -1.23
TDP1P38319 YPT31YER031C 672 nt7.38□□□□□ -1.23
TDP1P38319 HAM1YJR069C 594 nt7.38□□□□□ -1.23
TDP1P38319 VPS65YLR322W 315 nt7.38□□□□□ -1.23
TDP1P38319 LEO1YOR123C 1395 nt7.37□□□□□ -1.23
TDP1P38319 MAL31YBR298C 1845 nt7.37□□□□□ -1.23
TDP1P38319 TGA1tA(UGC)A 73 nt7.37□□□□□ -1.23
TDP1P38319 tA(UGC)EtA(UGC)E 73 nt7.37□□□□□ -1.23
TDP1P38319 tA(UGC)GtA(UGC)G 73 nt7.37□□□□□ -1.23
TDP1P38319 tA(UGC)LtA(UGC)L 73 nt7.37□□□□□ -1.23
TDP1P38319 tA(UGC)OtA(UGC)O 73 nt7.37□□□□□ -1.23
TDP1P38319 YER152W-AYER152W-A 567 nt7.37□□□□□ -1.23
TDP1P38319 GNA1YFL017C 480 nt7.37□□□□□ -1.23
TDP1P38319 ARG7YMR062C 1326 nt7.36□□□□□ -1.23
TDP1P38319 YEL023CYEL023C 2049 nt7.35□□□□□ -1.23
TDP1P38319 YHR131CYHR131C 2553 nt7.35□□□□□ -1.23
TDP1P38319 BXI1YNL305C 894 nt7.35□□□□□ -1.23
TDP1P38319 TCB1YOR086C 3561 nt7.35□□□□□ -1.23
TDP1P38319 ATG22YCL038C 1587 nt7.34□□□□□ -1.23
TDP1P38319 CDC13YDL220C 2775 nt7.34□□□□□ -1.23
TDP1P38319 AI5_BETAQ0075 1065 nt7.34□□□□□ -1.23
TDP1P38319 YOR041CYOR041C 432 nt7.34□□□□□ -1.23
TDP1P38319 SEC24YIL109C 2781 nt7.33□□□□□ -1.24
TDP1P38319 CPR2YHR057C 618 nt7.33□□□□□ -1.24
TDP1P38319 IDP3YNL009W 1263 nt7.33□□□□□ -1.24
TDP1P38319 MNN9YPL050C 1188 nt7.33□□□□□ -1.24
TDP1P38319 HNM1YGL077C 1692 nt7.32□□□□□ -1.24
TDP1P38319 PET18YCR020C 648 nt7.32□□□□□ -1.24
TDP1P38319 YER156CYER156C 1017 nt7.32□□□□□ -1.24
TDP1P38319 BMT5YIL096C 1011 nt7.32□□□□□ -1.24
TDP1P38319 YJL043WYJL043W 774 nt7.32□□□□□ -1.24
TDP1P38319 PMU1YKL128C 888 nt7.32□□□□□ -1.24
Retrieved 100 of 7,029 protein–RNA pairs in 108.9 ms