Protein–RNA interactions for Protein: P25808

SPB4, ATP-dependent rRNA helicase SPB4, yeastyeast

Predicted RBP Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPB4P25808 SAM50YNL026W 1455 nt10.04□□□□□ -0.8
SPB4P25808 ELP3YPL086C 1674 nt10.04□□□□□ -0.8
SPB4P25808 RNH1YMR234W 1047 nt10.04□□□□□ -0.8
SPB4P25808 GTB1YDR221W 2109 nt10.03□□□□□ -0.8
SPB4P25808 YCP4YCR004C 744 nt10.03□□□□□ -0.8
SPB4P25808 LIP2YLR239C 987 nt10.03□□□□□ -0.8
SPB4P25808 MSO1YNR049C 633 nt10.03□□□□□ -0.8
SPB4P25808 SSP2YOR242C 1116 nt10.03□□□□□ -0.8
SPB4P25808 BET2YPR176C 978 nt10.03□□□□□ -0.8
SPB4P25808 PRP40YKL012W 1752 nt10.02□□□□□ -0.81
SPB4P25808 YDL129WYDL129W 876 nt10.02□□□□□ -0.81
SPB4P25808 YDL241WYDL241W 372 nt10.02□□□□□ -0.81
SPB4P25808 YGR066CYGR066C 879 nt10.02□□□□□ -0.81
SPB4P25808 YKR104WYKR104W 921 nt10.02□□□□□ -0.81
SPB4P25808 APM4YOL062C 1476 nt10.02□□□□□ -0.81
SPB4P25808 RPN5YDL147W 1338 nt10.02□□□□□ -0.81
SPB4P25808 PCL9YDL179W 915 nt10.01□□□□□ -0.81
SPB4P25808 RMD5YDR255C 1266 nt10.01□□□□□ -0.81
SPB4P25808 PPA2YMR267W 933 nt10.01□□□□□ -0.81
SPB4P25808 UBS1YBR165W 834 nt10.01□□□□□ -0.81
SPB4P25808 ARO9YHR137W 1542 nt10.01□□□□□ -0.81
SPB4P25808 CIT3YPR001W 1461 nt10□□□□□ -0.81
SPB4P25808 URA8YJR103W 1737 nt10□□□□□ -0.81
SPB4P25808 YCR025CYCR025C 411 nt10□□□□□ -0.81
SPB4P25808 YGR283CYGR283C 1026 nt10□□□□□ -0.81
SPB4P25808 ERV41YML067C 1059 nt10□□□□□ -0.81
SPB4P25808 MRPS8YMR158W 468 nt10□□□□□ -0.81
SPB4P25808 PCL1YNL289W 840 nt10□□□□□ -0.81
SPB4P25808 YOL024WYOL024W 519 nt10□□□□□ -0.81
SPB4P25808 snR189snR189 189 nt10□□□□□ -0.81
SPB4P25808 SPS100YHR139C 981 nt9.99□□□□□ -0.81
SPB4P25808 SPO12YHR152W 522 nt9.99□□□□□ -0.81
SPB4P25808 RSF1YMR030W 1131 nt9.99□□□□□ -0.81
SPB4P25808 KRE1YNL322C 942 nt9.99□□□□□ -0.81
SPB4P25808 ECM2YBR065C 1095 nt9.99□□□□□ -0.81
SPB4P25808 CLD1YGR110W 1338 nt9.99□□□□□ -0.81
SPB4P25808 NMT1YLR195C 1368 nt9.99□□□□□ -0.81
SPB4P25808 HER2YMR293C 1395 nt9.99□□□□□ -0.81
SPB4P25808 tA(AGC)DtA(AGC)D 73 nt9.98□□□□□ -0.81
SPB4P25808 tA(AGC)FtA(AGC)F 73 nt9.98□□□□□ -0.81
SPB4P25808 tA(AGC)GtA(AGC)G 73 nt9.98□□□□□ -0.81
SPB4P25808 tA(AGC)HtA(AGC)H 73 nt9.98□□□□□ -0.81
SPB4P25808 tA(AGC)JtA(AGC)J 73 nt9.98□□□□□ -0.81
SPB4P25808 tA(AGC)K1tA(AGC)K1 73 nt9.98□□□□□ -0.81
SPB4P25808 tA(AGC)K2tA(AGC)K2 73 nt9.98□□□□□ -0.81
SPB4P25808 tA(AGC)LtA(AGC)L 73 nt9.98□□□□□ -0.81
SPB4P25808 tA(AGC)M1tA(AGC)M1 73 nt9.98□□□□□ -0.81
SPB4P25808 tA(AGC)M2tA(AGC)M2 73 nt9.98□□□□□ -0.81
SPB4P25808 tA(AGC)PtA(AGC)P 73 nt9.98□□□□□ -0.81
SPB4P25808 GTT3YEL017W 1014 nt9.98□□□□□ -0.81
SPB4P25808 ODC1YPL134C 933 nt9.98□□□□□ -0.81
SPB4P25808 CLB4YLR210W 1383 nt9.98□□□□□ -0.81
SPB4P25808 ERG13YML126C 1476 nt9.98□□□□□ -0.81
SPB4P25808 SSL2YIL143C 2532 nt9.97□□□□□ -0.81
SPB4P25808 IPL1YPL209C 1104 nt9.97□□□□□ -0.81
SPB4P25808 POP2YNR052C 1302 nt9.97□□□□□ -0.81
SPB4P25808 ATP6Q0085 780 nt9.96□□□□□ -0.82
SPB4P25808 YIR043CYIR043C 693 nt9.96□□□□□ -0.82
SPB4P25808 CDD1YLR245C 429 nt9.96□□□□□ -0.82
SPB4P25808 YOL038C-AYOL038C-A 96 nt9.96□□□□□ -0.82
SPB4P25808 CYT1YOR065W 930 nt9.96□□□□□ -0.82
SPB4P25808 YOR300WYOR300W 309 nt9.96□□□□□ -0.82
SPB4P25808 TIP41YPR040W 1071 nt9.96□□□□□ -0.82
SPB4P25808 ENP1YBR247C 1452 nt9.96□□□□□ -0.82
SPB4P25808 ADE8YDR408C 645 nt9.95□□□□□ -0.82
SPB4P25808 YER152W-AYER152W-A 567 nt9.95□□□□□ -0.82
SPB4P25808 SNF7YLR025W 723 nt9.95□□□□□ -0.82
SPB4P25808 ASP3-1YLR155C 1089 nt9.95□□□□□ -0.82
SPB4P25808 ASP3-2YLR157C 1089 nt9.95□□□□□ -0.82
SPB4P25808 ASP3-3YLR158C 1089 nt9.95□□□□□ -0.82
SPB4P25808 ASP3-4YLR160C 1089 nt9.95□□□□□ -0.82
SPB4P25808 PRM4YPL156C 855 nt9.95□□□□□ -0.82
SPB4P25808 IPI3YNL182C 1668 nt9.94□□□□□ -0.82
SPB4P25808 QDR2YIL121W 1629 nt9.94□□□□□ -0.82
SPB4P25808 VPS62YGR141W 1404 nt9.94□□□□□ -0.82
SPB4P25808 INM1YHR046C 888 nt9.94□□□□□ -0.82
SPB4P25808 NAS2YIL007C 663 nt9.94□□□□□ -0.82
SPB4P25808 MCM21YDR318W 1107 nt9.93□□□□□ -0.82
SPB4P25808 YGR011WYGR011W 327 nt9.93□□□□□ -0.82
SPB4P25808 CTR3YLR411W 726 nt9.93□□□□□ -0.82
SPB4P25808 YMR075C-AYMR075C-A 366 nt9.93□□□□□ -0.82
SPB4P25808 ARC35YNR035C 1029 nt9.92□□□□□ -0.82
SPB4P25808 RRT8YOL048C 1029 nt9.92□□□□□ -0.82
SPB4P25808 ATP12YJL180C 978 nt9.91□□□□□ -0.82
SPB4P25808 HXK1YFR053C 1458 nt9.91□□□□□ -0.82
SPB4P25808 PAF1YBR279W 1338 nt9.9□□□□□ -0.82
SPB4P25808 ALD5YER073W 1563 nt9.9□□□□□ -0.82
SPB4P25808 GTO1YGR154C 1071 nt9.9□□□□□ -0.82
SPB4P25808 BSC5YNR069C 1470 nt9.9□□□□□ -0.83
SPB4P25808 LYS20YDL182W 1287 nt9.89□□□□□ -0.83
SPB4P25808 AIM1YAL046C 357 nt9.89□□□□□ -0.83
SPB4P25808 MPC54YOR177C 1395 nt9.88□□□□□ -0.83
SPB4P25808 HAT2YEL056W 1206 nt9.88□□□□□ -0.83
SPB4P25808 OPI3YJR073C 621 nt9.88□□□□□ -0.83
SPB4P25808 GLE1YDL207W 1617 nt9.88□□□□□ -0.83
SPB4P25808 CTF18YMR078C 2226 nt9.87□□□□□ -0.83
SPB4P25808 YER138W-AYER138W-A 105 nt9.87□□□□□ -0.83
SPB4P25808 OKP1YGR179C 1221 nt9.87□□□□□ -0.83
SPB4P25808 YHL044WYHL044W 708 nt9.87□□□□□ -0.83
SPB4P25808 BUD20YLR074C 501 nt9.87□□□□□ -0.83
Retrieved 100 of 7,029 protein–RNA pairs in 82.4 ms