Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.7■□□□□ 0.9
LINC00473A8K010 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.7■□□□□ 0.9
LINC00473A8K010 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.7■□□□□ 0.9
LINC00473A8K010 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00473A8K010 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00473A8K010 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00473A8K010 WHAMMP2-203ENST00000563942 1603 ntBASIC20.69■□□□□ 0.9
LINC00473A8K010 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00473A8K010 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00473A8K010 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00473A8K010 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00473A8K010 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00473A8K010 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.68■□□□□ 0.9
LINC00473A8K010 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00473A8K010 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00473A8K010 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00473A8K010 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00473A8K010 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.67■□□□□ 0.9
LINC00473A8K010 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00473A8K010 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00473A8K010 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00473A8K010 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.66■□□□□ 0.9
LINC00473A8K010 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
LINC00473A8K010 MIR3665-201ENST00000578708 105 ntBASIC20.65■□□□□ 0.9
LINC00473A8K010 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LINC00473A8K010 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LINC00473A8K010 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LINC00473A8K010 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.64■□□□□ 0.89
LINC00473A8K010 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LINC00473A8K010 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
LINC00473A8K010 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00473A8K010 LINC00273-201ENST00000539813 1452 ntBASIC20.63■□□□□ 0.89
LINC00473A8K010 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00473A8K010 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.62■□□□□ 0.89
LINC00473A8K010 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
LINC00473A8K010 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LINC00473A8K010 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.61■□□□□ 0.89
LINC00473A8K010 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LINC00473A8K010 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
LINC00473A8K010 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
LINC00473A8K010 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.61■□□□□ 0.89
LINC00473A8K010 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LINC00473A8K010 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.6■□□□□ 0.89
LINC00473A8K010 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LINC00473A8K010 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINC00473A8K010 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
LINC00473A8K010 AP006261.1-201ENST00000584783 668 ntBASIC20.59■□□□□ 0.89
LINC00473A8K010 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.59■□□□□ 0.89
LINC00473A8K010 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.59■□□□□ 0.89
LINC00473A8K010 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINC00473A8K010 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.58■□□□□ 0.89
LINC00473A8K010 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LINC00473A8K010 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
LINC00473A8K010 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LINC00473A8K010 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LINC00473A8K010 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.58■□□□□ 0.89
LINC00473A8K010 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.58■□□□□ 0.88
LINC00473A8K010 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
LINC00473A8K010 AC018358.1-201ENST00000631079 1402 ntBASIC20.57■□□□□ 0.88
LINC00473A8K010 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
LINC00473A8K010 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00473A8K010 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00473A8K010 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.56■□□□□ 0.88
LINC00473A8K010 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00473A8K010 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00473A8K010 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINC00473A8K010 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.55■□□□□ 0.88
LINC00473A8K010 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINC00473A8K010 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.55■□□□□ 0.88
LINC00473A8K010 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00473A8K010 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
LINC00473A8K010 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
LINC00473A8K010 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00473A8K010 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00473A8K010 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.54■□□□□ 0.88
LINC00473A8K010 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00473A8K010 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00473A8K010 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LINC00473A8K010 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00473A8K010 AC087741.3-201ENST00000624270 1347 ntBASIC20.53■□□□□ 0.88
LINC00473A8K010 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00473A8K010 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00473A8K010 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.53■□□□□ 0.88
LINC00473A8K010 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00473A8K010 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00473A8K010 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00473A8K010 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.53■□□□□ 0.88
LINC00473A8K010 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.52■□□□□ 0.88
LINC00473A8K010 AL162393.1-201ENST00000437852 946 ntBASIC20.51■□□□□ 0.87
LINC00473A8K010 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.51■□□□□ 0.87
LINC00473A8K010 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.51■□□□□ 0.87
LINC00473A8K010 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
LINC00473A8K010 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LINC00473A8K010 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00473A8K010 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00473A8K010 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.5■□□□□ 0.87
LINC00473A8K010 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00473A8K010 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00473A8K010 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00473A8K010 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms