Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCP4L1A6NKN8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.24■□□□□ 0.83
PCP4L1A6NKN8 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCP4L1A6NKN8 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCP4L1A6NKN8 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCP4L1A6NKN8 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCP4L1A6NKN8 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCP4L1A6NKN8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.22■□□□□ 0.83
PCP4L1A6NKN8 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PCP4L1A6NKN8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCP4L1A6NKN8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.22■□□□□ 0.83
PCP4L1A6NKN8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PCP4L1A6NKN8 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.21■□□□□ 0.83
PCP4L1A6NKN8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCP4L1A6NKN8 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PCP4L1A6NKN8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PCP4L1A6NKN8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PCP4L1A6NKN8 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCP4L1A6NKN8 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCP4L1A6NKN8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PCP4L1A6NKN8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PCP4L1A6NKN8 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCP4L1A6NKN8 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PCP4L1A6NKN8 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCP4L1A6NKN8 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCP4L1A6NKN8 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCP4L1A6NKN8 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCP4L1A6NKN8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCP4L1A6NKN8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCP4L1A6NKN8 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCP4L1A6NKN8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCP4L1A6NKN8 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCP4L1A6NKN8 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCP4L1A6NKN8 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCP4L1A6NKN8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCP4L1A6NKN8 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCP4L1A6NKN8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.15■□□□□ 0.82
PCP4L1A6NKN8 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCP4L1A6NKN8 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCP4L1A6NKN8 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCP4L1A6NKN8 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCP4L1A6NKN8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PCP4L1A6NKN8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PCP4L1A6NKN8 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.14■□□□□ 0.81
PCP4L1A6NKN8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PCP4L1A6NKN8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCP4L1A6NKN8 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCP4L1A6NKN8 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.13■□□□□ 0.81
PCP4L1A6NKN8 AC079834.2-201ENST00000609776 1949 ntBASIC20.13■□□□□ 0.81
PCP4L1A6NKN8 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PCP4L1A6NKN8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCP4L1A6NKN8 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
PCP4L1A6NKN8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCP4L1A6NKN8 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCP4L1A6NKN8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
PCP4L1A6NKN8 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCP4L1A6NKN8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCP4L1A6NKN8 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCP4L1A6NKN8 AL024507.2-201ENST00000606070 2574 ntBASIC20.11■□□□□ 0.81
PCP4L1A6NKN8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCP4L1A6NKN8 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.11■□□□□ 0.81
PCP4L1A6NKN8 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCP4L1A6NKN8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCP4L1A6NKN8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
PCP4L1A6NKN8 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCP4L1A6NKN8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.11■□□□□ 0.81
PCP4L1A6NKN8 RNF165-205ENST00000588679 2904 ntBASIC20.1■□□□□ 0.81
PCP4L1A6NKN8 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCP4L1A6NKN8 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.1■□□□□ 0.81
PCP4L1A6NKN8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCP4L1A6NKN8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCP4L1A6NKN8 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCP4L1A6NKN8 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCP4L1A6NKN8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PCP4L1A6NKN8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PCP4L1A6NKN8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCP4L1A6NKN8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.08■□□□□ 0.8
PCP4L1A6NKN8 AC012676.1-201ENST00000574705 1949 ntBASIC20.08■□□□□ 0.8
PCP4L1A6NKN8 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCP4L1A6NKN8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCP4L1A6NKN8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCP4L1A6NKN8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCP4L1A6NKN8 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCP4L1A6NKN8 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCP4L1A6NKN8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCP4L1A6NKN8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCP4L1A6NKN8 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCP4L1A6NKN8 AC020928.2-201ENST00000588717 2197 ntBASIC20.05■□□□□ 0.8
PCP4L1A6NKN8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCP4L1A6NKN8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCP4L1A6NKN8 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PCP4L1A6NKN8 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCP4L1A6NKN8 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCP4L1A6NKN8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.04■□□□□ 0.8
PCP4L1A6NKN8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCP4L1A6NKN8 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCP4L1A6NKN8 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCP4L1A6NKN8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCP4L1A6NKN8 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCP4L1A6NKN8 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms